Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,795,926 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,795,9260GC99.3% 701.7 / ‑6.0 299intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (157/139);  minor base T (1/1);  total (158/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,795,9270CG99.3% 703.8 / NA 299intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (157/140);  minor base T (1/1);  total (158/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,795,9280TA99.7% 708.3 / NA 299intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (157/140);  minor base G (0/1);  total (158/141)
Fisher's exact test for biased strand distribution p-value = 4.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 299 total aligned reads displayed.

TGGCCCAACCACCGCAATGGTGGCGCTTTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTGCTGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGGCTGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTACGGCGGCATATAATCATTAA  >  CP042583/1795647‑1796203
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                    
  gCCCAACCACCGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACt                                                                                                                                                                                                                                                                              <  1:267713/288‑1 (MQ=255)
   ccccACCACCGAAATGGGGGCCGATTTTTTCAGCGGTAACGTTGCGAGACGGGTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTGTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACtcg                                                                                                                                                                                                                                                                            <  2:2692286/289‑1 (MQ=255)
        ccaccGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCgct                                                                                                                                                                                                                                                                       <  1:157421/289‑1 (MQ=255)
            cGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCgctcat                                                                                                                                                                                                                                                                    >  1:1315229/1‑288 (MQ=255)
              cAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAgtagta                                                                                                                                                                                                                                                                                >  1:2079671/1‑274 (MQ=255)
                      gccgattttttCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATCTCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCCCTGCCATCGTCACTTTGCCTGATTTAATCAACCCAGACCGATCCTTCGCGTAGTACTCGTCGCTCATGCCCTTGtt                                                                                                                                                                                                                                                           >  2:1488781/6‑287 (MQ=255)
                                     ggTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAgc                                                                                                                                                                                                                                           <  2:777704/288‑1 (MQ=255)
                                                    cGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCa                                                                                                                                                                                                                            <  2:965671/288‑1 (MQ=255)
                                                           tCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCATCTCTGCCATCGTCACTTTGCCGGTTTTAATCAACCCAGGCAGTTACTTCTAGCAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCTCCACGCGCACCACATCTGcccg                                                                                                                                                                                                                    >  2:346409/1‑287 (MQ=255)
                                                                         cTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGc                                                                                                                                                                                                      <  2:1315229/289‑1 (MQ=255)
                                                                            tCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCAt                                                                                                                                                                                                   >  1:1970051/1‑289 (MQ=255)
                                                                              gcgcgcCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGt                                                                                                                                                                                                 <  1:2259262/289‑1 (MQ=255)
                                                                               cgcgcCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCgct                                                                                                                                                                                                                                                                       >  1:1732119/1‑218 (MQ=255)
                                                                                   ccccttcccgccggtcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAAt                                                                                                                                                                                            <  2:1732892/275‑1 (MQ=255)
                                                                                                      ccGGGGCAGGTGGTTTGCTGCATTAGGTTCCACCGGTTCCGAATCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCg                                                                                                                                                                         <  2:1455169/288‑1 (MQ=255)
                                                                                                        ggTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTg                                                                                                                                                                       >  1:1669267/1‑289 (MQ=255)
                                                                                                          tGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGag                                                                                                                                                                     >  1:2617621/1‑288 (MQ=255)
                                                                                                          tGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGa                                                                                                                                                                      >  2:2323744/1‑288 (MQ=255)
                                                                                                            cAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTTGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCg                                                                                                                                                                   >  2:301571/1‑289 (MQ=255)
                                                                                                                    tttCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCa                                                                                                                                                                                                                            >  2:2170257/1‑224 (MQ=255)
                                                                                                                    tttCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCa                                                                                                                                                                                                                            <  1:2170257/224‑1 (MQ=255)
                                                                                                                    tttCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAACCGGt                                                                                                                                                           >  2:1620882/1‑289 (MQ=255)
                                                                                                                      tCGGCTGTGGTATCAACCTGGTCGGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGa                                                                                                                                                         <  2:59569/289‑1 (MQ=255)
                                                                                                                      tCGGCAATGGTATCAACCGGGTCAGACTACTACGACCCCGAAGGGCTGTATGGGTCCTTAACCAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGa                                                                                                                                                         <  2:136315/289‑1 (MQ=255)
                                                                                                                                       cGGTTCGGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCAc                                                                                                                                       <  1:1109457/289‑1 (MQ=255)
                                                                                                                                         ggTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACgcgc                                                                                                                                                                                                                                  <  2:2463836/197‑1 (MQ=255)
                                                                                                                                         ggTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCa                                                                                                                                                                                                                            >  2:61793/1‑203 (MQ=255)
                                                                                                                                         ggTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGcccc                                                                                                                                         <  2:1666200/285‑1 (MQ=255)
                                                                                                                                         ggTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTg                                                                                                                                     >  2:2490760/1‑289 (MQ=255)
                                                                                                                                         ggTCAGACTATTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTCCACGGCGGTCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCTGGATTTAATCAACCCAGGCAGATACTTCGAGTACTACTCGTCGCTCATGCGCATTCTCATTCCGGCTTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTTATCCGCTCTCTGATTTCACCTACATCCGCACCGCTGATGCATTTAA‑CCCCCCTCTg                                                                                                                                     >  2:1841892/1‑289 (MQ=255)
                                                                                                                                           tCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTgg                                                                                                                                    <  1:2463180/288‑1 (MQ=255)
                                                                                                                                           tCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGt                                                                                                                                   <  2:634792/289‑1 (MQ=255)
                                                                                                                                               aCTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTcgcg                                                                                                                               <  1:1134222/289‑1 (MQ=255)
                                                                                                                                                gtctTTCGGCCCCAGAGTGCTGTATGGGGCGGTATACGACCCCATAGCAGAGTTAATGTTCAGTACATGGCGGGCAGCATCGTCCCGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTGGATTCCTGTTTTCAGCGCCGCGCGCACCGCCTGTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTcgcg                                                                                                                               <  2:1822089/287‑1 (MQ=255)
                                                                                                                                                ctctTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTcgcg                                                                                                                               <  1:1285181/288‑1 (MQ=255)
                                                                                                                                                   tttCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCCCCGTTATCGGCACCGGTGATGCCTTTAA‑AGCCCCCCTGGTCGCCCAGa                                                                                                                           >  2:2277352/1‑289 (MQ=255)
                                                                                                                                                    ttCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAACCGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGaa                                                                                                                          >  2:423176/1‑289 (MQ=255)
                                                                                                                                                             aaaTGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTca                                                                                                                 >  2:821685/1‑289 (MQ=255)
                                                                                                                                                                    tGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCa                                                                                                          <  1:2513184/289‑1 (MQ=255)
                                                                                                                                                                       aTGGGGCGTTAAACAACCCCAATTCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAgg                                                                                                        <  2:1067177/288‑1 (MQ=255)
                                                                                                                                                                             cGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGa                                                                                                 >  1:836666/1‑289 (MQ=255)
                                                                                                                                                                              gTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGCTTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCCCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTACTCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑CGCCCCACTGGTCGCGCAGAACATCCTTCAGCAGCAAGGAATCGTAg                                                                                                >  2:2537970/1‑289 (MQ=255)
                                                                                                                                                                              gTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGa                                                                                                                                                                 <  1:658535/225‑1 (MQ=255)
                                                                                                                                                                              gTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAg                                                                                                >  1:2648776/1‑289 (MQ=255)
                                                                                                                                                                                taacctacCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCATCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGt                                                                                              <  2:127204/283‑1 (MQ=255)
                                                                                                                                                                                tAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTcag                                                                                                                <  2:520776/271‑1 (MQ=255)
                                                                                                                                                                                tAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGt                                                                                              >  1:1904291/1‑289 (MQ=255)
                                                                                                                                                                                         ccATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGt                                                                                     <  1:1377322/289‑1 (MQ=255)
                                                                                                                                                                                                 tatTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCAcc                                                                                                                                                                          >  1:1597684/1‑197 (MQ=255)
                                                                                                                                                                                                 tatTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGa                                                                                                                                                                 <  1:1860852/206‑1 (MQ=255)
                                                                                                                                                                                                 tatTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTgg                                                                                                                                    <  2:2641265/234‑1 (MQ=255)
                                                                                                                                                                                                 tatTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCa                                                                             >  1:1035720/1‑289 (MQ=255)
                                                                                                                                                                                                 tatTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCa                                                                             >  2:1134296/1‑289 (MQ=255)
                                                                                                                                                                                                  atTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGc                                                                                                                                                                                                      >  2:1882603/1‑168 (MQ=255)
                                                                                                                                                                                                  atTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGcc                                                                                                           <  1:763586/258‑1 (MQ=255)
                                                                                                                                                                                                  atTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTTGCTGGCGTGCCGTTCa                                                                             >  2:1969509/1‑288 (MQ=255)
                                                                                                                                                                                                   tttAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGAttt                                                                                                                                                                                                                                               <  1:54445/126‑1 (MQ=255)
                                                                                                                                                                                                      aaCGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCAc                                                                                                                                                                                                                                >  2:2252002/1‑138 (MQ=255)
                                                                                                                                                                                                      aaCGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCg                                                                                                                                                                                                                              >  2:2081578/1‑140 (MQ=255)
                                                                                                                                                                                                      aaCGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAgcgag                                                                        >  2:219099/1‑285 (MQ=255)
                                                                                                                                                                                                           tCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAgcgagttca                                                                    >  2:1578250/1‑280 (MQ=255)
                                                                                                                                                                                                            cAGTACTTTGCGGGCAGCATCCTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAgc                                                                  <  1:1814741/289‑1 (MQ=255)
                                                                                                                                                                                                            cAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTcgcg                                                                                                                               >  2:1156295/1‑228 (MQ=255)
                                                                                                                                                                                                            cAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGaa                                                                                                      >  1:632191/1‑253 (MQ=255)
                                                                                                                                                                                                            cAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGt                                                                                              >  1:1025510/1‑261 (MQ=255)
                                                                                                                                                                                                            cAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAgc                                                                  <  1:301571/289‑1 (MQ=255)
                                                                                                                                                                                                            cAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAgc                                                                  <  1:2477276/289‑1 (MQ=255)
                                                                                                                                                                                                             aGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAgc                                                                  >  1:2388346/1‑288 (MQ=255)
                                                                                                                                                                                                              gTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCa                                                                                                                                                                                                                            >  2:2346265/1‑134 (MQ=255)
                                                                                                                                                                                                              gTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCa                                                                                                                                                                                                                            <  1:2346265/134‑1 (MQ=255)
                                                                                                                                                                                                                    ggCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTCA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGccacca                                                           >  2:864567/1‑288 (MQ=255)
                                                                                                                                                                                                                    ggCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAgcgagttca                                                                    >  1:1152964/1‑271 (MQ=255)
                                                                                                                                                                                                                         gcagcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCTTCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGaa                                                                                                      <  1:1503876/240‑1 (MQ=255)
                                                                                                                                                                                                                         gcagcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGAt                                                                                                                                                                     >  1:1394881/1‑178 (MQ=255)
                                                                                                                                                                                                                         gcagcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACa                                                                                                                        >  2:2336122/1‑222 (MQ=255)
                                                                                                                                                                                                                         gcagcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCAcc                                                      >  2:1923144/1‑288 (MQ=255)
                                                                                                                                                                                                                         gcagcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCAcc                                                      >  2:259008/1‑288 (MQ=255)
                                                                                                                                                                                                                         gcagcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTCCCGGTCAGCGAGTTCAGCGCCACCCTcccc                                                      >  2:662670/1‑288 (MQ=255)
                                                                                                                                                                                                                            gcaTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCa                                                                                                                                                                            >  1:2290247/1‑168 (MQ=255)
                                                                                                                                                                                                                             caTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGc                                                                                                                                                                                                      >  1:122884/1‑141 (MQ=255)
                                                                                                                                                                                                                             caTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGc                                                                                                                                                                                                      <  2:122884/141‑1 (MQ=255)
                                                                                                                                                                                                                             caTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCgcgc                                                  >  2:391440/1‑288 (MQ=255)
                                                                                                                                                                                                                             caTCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTAGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCGTCCGGCTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACGGTGATCGGAATCGGTGGCGCCTTTAAGGGCCCCCGTGTTCCCGC‑GACCTGCTTTCCGCAGCCCAGAATCGGAGGCCGCTGGCGTTCCGTTCACGGGGGTCAACGCCCCCATccgccccc                                                  >  2:1768482/1‑281 (MQ=255)
                                                                                                                                                                                                                               tcctCCAGCTCCGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGcgccgc                                               <  1:1742513/286‑1 (MQ=255)
                                                                                                                                                                                                                                 gTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGctg                                             <  1:1444140/289‑1 (MQ=255)
                                                                                                                                                                                                                                    cAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGctgcct                                          <  1:2331186/289‑1 (MQ=255)
                                                                                                                                                                                                                                       ctctGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGctgcctgc                                        >  2:1346121/1‑288 (MQ=255)
                                                                                                                                                                                                                                         ctGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTc                                     <  1:1540814/289‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTc                                     <  1:1099055/288‑1 (MQ=255)
                                                                                                                                                                                                                                            ccATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATg                                                                                                                                                       <  1:1184963/173‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTGATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGcc                                <  1:617809/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGcc                                <  1:999552/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      tttGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCCCCACCATCACCGCGCCGCTGCCTGCCTCCACCCCCGCTTTg                        >  2:1390083/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        tGCCGGATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGGCGCTCATGCTCATGTTGAGTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCATAACATCTTTCAGCAGCCAGGAATCGGATGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTa                      <  1:1924426/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             gATTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTAcggcg                 >  1:451202/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              aTTTAATCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTAcggcg                 <  1:2218285/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aTCAACCCAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTACGGCGGCatat           <  1:1350494/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cccAGGCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTcgcg                                                                                                                               <  1:410757/168‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cggCAGATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGCGAGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTACGGCGGCATATAATCATTa   <  2:1426901/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                gATACTTCGAGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGAt                                                                                                                                                        <  1:878393/136‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                    
TGGCCCAACCACCGCAATGGTGGCGCTTTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCCAGCTCTGCCATCGTCACTTTGCCGGATTTAATCAACCCAGGCAGATACTTGCTGTAGTACTCGTCGCTCATGCTCATGTTGATTCCGGATTTCAGCGCCACGCGCACCGCATCTTCCGGGTCTGCCGCCGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAA‑AGCCCCACTGGTCGCGCAGAACATCTTTCAGCAGCCAGGAATCGGAGGTGGCTGGCGTGCCGTTCAGGCTGTTCAGCGCCACCATCACCGCGCCGCTGCCTGCGTCCAGCCCCGCTTTGTACGGCGGCATATAATCATTAA  >  CP042583/1795647‑1796203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A