Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,817,062 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,817,0620GC99.1% 757.1 / NA 327intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base C (146/178);  total (147/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,817,0630CG99.1% 768.7 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (145/178);  minor base A (1/2);  total (146/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,817,0640TA99.4% 768.6 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (146/176);  minor base C (0/2);  total (146/180)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 327 total aligned reads displayed.

CCGGTCCGGCAGCACGCAAAGTTAACTGACGCCAGAGCCATTCCACCGGCCCCTGGCGGAAGTAACGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGGCTCGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCAGTGCCAGTAAACTGTTGCCAAC  >  CP042583/1816776‑1817343
                                                                                                                                                                                                                                                                                              |||                                                                                                                                                                                                                                                                                         
                      tAACTGACGCCAGAGCCATTCCACCGGCCCCTGGCGGAAGTAACGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGaa                                                                                                                                                                                                                                                                       <  1:1550316/287‑1 (MQ=255)
                          tGACGCCAGAGCCATTCCACCGGCCCCTGGCGGAAGTAACGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGgcg                                                                                                                                                                                                                                                                 <  2:558613/289‑1 (MQ=255)
                             cGCCAGAGCCATTCCACCGGCCCCTGGCGGAAGTAACGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCa                                                                                                                                                                                                                                                               >  2:1772433/1‑288 (MQ=255)
                              cccaacagcatcacACCGCCCCCAGACGAAAGAAACGCAACCAGACAACGAAGAAGAGAATCTCCTCAAGCCATACCGGAATAACAAACGCCAGCAGCTCCAAGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACt                                                                                                                                                                                                                                                             <  2:2096745/276‑1 (MQ=255)
                                        ttCCCCCGGCCCCCGGCGGAAGTAACGCAGCCAGATCACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCcgc                                                                                                                                                                                                                                                  <  2:624578/289‑1 (MQ=255)
                                              cGGCCCCTGGCGGAAGTAACGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCAtt                                                                                                                                                                                                                                            <  1:482291/289‑1 (MQ=255)
                                                   gcTGGCAGAAAGAACGCAGCCAGATCACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAg                                                                                                                                                                                                                                       <  2:2611355/288‑1 (MQ=255)
                                                                aCGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCacac                                                                                                                                                                                                                          <  1:1199983/289‑1 (MQ=255)
                                                                  gcagccggcacaCAGAGAAGGAGATATTCGCCAGCCATACCGGAATAACACACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAAAAATCCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑a                                                                                                                                                                                                                       <  2:888276/278‑1 (MQ=255)
                                                                  gCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑a                                                                                                                                                                                                                       <  2:2400482/289‑1 (MQ=255)
                                                                     gCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAAAAGCGACGCATAGCCAAGACCACGAAACGGCG‑ACACACGTTCCCGCGGCACTTGCGGTAACAAGCCacacacgcg                                                                                                                                                                                                                     >  2:652756/1‑284 (MQ=255)
                                                                       cAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGAt                                                                                                                                                                                                                  >  2:443675/1‑289 (MQ=255)
                                                                                   aagaGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTg                                                                                                                                                                                                                                          >  2:1193682/1‑254 (MQ=255)
                                                                                      agGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCCTTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCa                                                                                                                                                                                                      >  2:2622166/1‑286 (MQ=255)
                                                                                      agGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGc                                                                                                                                                                                                    <  2:2508459/288‑1 (MQ=255)
                                                                                        gATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAgg                                                                                                                                                                                                                               <  2:1991745/260‑1 (MQ=255)
                                                                                        gATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCCCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAACCGGCGCACTCA‑CTTCCCGCGGCACTTGAAGTAAGCAGGACCAGC‑AGCGAACCGCCCAGCCCAGCtc                                                                                                                                                                                                  >  2:1735314/1‑287 (MQ=255)
                                                                                             tCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGgcg                                                                                                                                                                                                                                                                 >  1:2016289/1‑222 (MQ=255)
                                                                                             tCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCcgcg                                                                                                                                                                                                                                                 >  2:1011833/1‑237 (MQ=255)
                                                                                             tCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCcgcg                                                                                                                                                                                                                                                 <  1:1011833/237‑1 (MQ=255)
                                                                                               gccagccaTACCGGAATAACAAACGCCAGCAGCCCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGCAAAAAAGCGAGGTACAAATCAGAGTTTGCAATAGCTCGTTGGTCAGCGCCATCAGTCCGACGCAGGCGATCGCACGCCCCAGCTCAAACCGGCACAATTGCCGCCAGAAGCCATATAACAGCAACGCATACCCCAACGACTGAACAGGCGAAATCA‑GTTCCCGCGCCACTTCTAGTACGAAGTC‑CACCGACCGTGCCGACCAGTCAAGCTGCCAtc                                                                                                                                                                                             >  2:1415678/1‑285 (MQ=255)
                                                                                                  agccaTACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCcgc                                                                                                                                                                                                                                                  <  1:2033264/231‑1 (MQ=255)
                                                                                                  agccaTACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTaa                                                                                                                                                                                                                                    <  2:1040412/245‑1 (MQ=255)
                                                                                                     caTACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGc                                                                                                                                                                                      <  1:2148761/287‑1 (MQ=255)
                                                                                                         ccGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGc                                                                                                                                                                                <  2:488761/289‑1 (MQ=255)
                                                                                                             aaTAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTGAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAgg                                                                                                                                                                             <  1:1873368/288‑1 (MQ=255)
                                                                                                             aaTAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGa                                                                                                                                                                            >  1:1510387/1‑289 (MQ=255)
                                                                                                                  cAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGtt                                                                                                                                                                       <  1:1319956/289‑1 (MQ=255)
                                                                                                                     aCGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCCGGGCCATGGCAGGGAGGTTCAt                                                                                                                                                                    >  2:731456/1‑289 (MQ=255)
                                                                                                                       gcaagcagcTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATgg                                                                                                                                                                  <  2:2202109/286‑1 (MQ=255)
                                                                                                                       gCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACTCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGTCCAGTCCAGCTCCCATTGCAAGGCGAGGGCAGGAAGGGTAAggg                                                                                                                                                                  >  2:287305/1‑289 (MQ=255)
                                                                                                                       gCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATgg                                                                                                                                                                  >  1:116919/1‑289 (MQ=255)
                                                                                                                         cagcagCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTc                                                                                                                                                                >  1:846849/1‑289 (MQ=255)
                                                                                                                                   aGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATc                                                                                                                                                       >  2:1098941/1‑288 (MQ=255)
                                                                                                                                     gCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAgg                                                                                                                                                                             <  1:2644980/264‑1 (MQ=255)
                                                                                                                                     gCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAgg                                                                                                                                                                             >  2:2644980/1‑264 (MQ=255)
                                                                                                                                         tCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCcgc                                                                                                                                                                                                                                                  >  2:319086/1‑192 (MQ=255)
                                                                                                                                         tCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTa                                                                                                                                                                      <  1:1755666/267‑1 (MQ=255)
                                                                                                                                                   tAAACAAACCGAGGTGGTACAAAAGCGTGGTGCAAATCAGCGTTTGCAATAGATAGTTGGTCAGGGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAAcc                                                                                                                                      <  1:1404748/289‑1 (MQ=255)
                                                                                                                                                         aacCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGc                                                                                                                                                                                           >  1:161412/1‑230 (MQ=255)
                                                                                                                                                           ccGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGca                                                                                                                                                                                                                             >  2:2019988/1‑195 (MQ=255)
                                                                                                                                                                gtggtAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCCCAAAACCAGTACGACGATAg                                                                                                                         >  1:1442463/1‑289 (MQ=255)
                                                                                                                                                                gtggtAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATa                                                                                                                          <  1:858100/288‑1 (MQ=255)
                                                                                                                                                                     aaaaagGCGGGGTGCAAGATAGCGTTTGCGATAGAGAGGTGAGCAGATCAATCGGTCCGGCGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATGGCGGCCAGAAGCGATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑GGGGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCCATCGCCACCAGCACAAAACCAGTACGACGATAGTGAc                                                                                                                     <  2:1252510/288‑1 (MQ=255)
                                                                                                                                                                     aaaaaaGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGAc                                                                                                                     <  1:32663/288‑1 (MQ=255)
                                                                                                                                                                           gCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGca                                                                                                                                                                                                                             <  1:939289/179‑1 (MQ=255)
                                                                                                                                                                              tGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGcc                                                                                                                                                                                                             <  1:2097560/191‑1 (MQ=255)
                                                                                                                                                                              tGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAg                                                                                                                                    <  1:605083/264‑1 (MQ=255)
                                                                                                                                                                               ggTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGaa                                                                                                           <  1:1098941/288‑1 (MQ=255)
                                                                                                                                                                                 tACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATa                                                                                                                          <  1:1958973/271‑1 (MQ=255)
                                                                                                                                                                                  aacaatcacgctttGCAATAGAGACGTGGTCAAGGCAAGCCGTCCGTGCCAGGGGATCGCAAGCACCATCTGAAAGCGGCTCAATTGGGGCCAGAAGACATAACACAGCGCCGCATAGCCAATCGCCTGAAACGGCGCACTCA‑TTTCCCGCGGCATTTGAAGGAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTg                                                                                                        <  2:2461787/277‑1 (MQ=255)
                                                                                                                                                                                  aCAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCTCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTg                                                                                                        >  2:1598973/1‑288 (MQ=255)
                                                                                                                                                                                   aaaaGCAGCCTCTGCAATAGATGGTTGGCCAGCGCCATCCGTCCGACGCAGGCGATC‑‑‑‑GCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGCCGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCttt                                                                                                  <  2:114191/288‑1 (MQ=255)
                                                                                                                                                                                         aGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGACGTAAGAAGGCACACC‑AGCGATACGCCCAGCCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCCCCCCAATCGCCACCAGCACAAACCCCGTACGACGATAGTGACGTACGTTGAAATGCCCCTTca                                                                                                >  2:2316289/1‑289 (MQ=255)
                                                                                                                                                                                           cGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTcag                                                                                               >  1:1866793/1‑288 (MQ=255)
                                                                                                                                                                                           cGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTcag                                                                                               >  2:130936/1‑288 (MQ=255)
                                                                                                                                                                                           cGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTcag                                                                                               >  2:2113349/1‑288 (MQ=255)
                                                                                                                                                                                            gTTTGAGATAGATAGTTGGTCCGCGCCATCCGTCCGACGCAGGCGATCGCAAGAACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTcagc                                                                                              <  2:352680/288‑1 (MQ=255)
                                                                                                                                                                                                         agTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCa                                                                                 >  2:187137/1‑288 (MQ=255)
                                                                                                                                                                                                           ttGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCa                                                                              >  1:1564308/1‑289 (MQ=255)
                                                                                                                                                                                                              gTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑a                                                                                                                                                                                                                       >  2:598160/1‑149 (MQ=255)
                                                                                                                                                                                                                 aGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAg                                                                             <  1:1370229/284‑1 (MQ=255)
                                                                                                                                                                                                                 aGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAg                                                                             >  2:1370229/1‑284 (MQ=255)
                                                                                                                                                                                                                  tgcaggaacgtccgACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGc                                                                                                                                                                                                    <  2:414109/156‑1 (MQ=255)
                                                                                                                                                                                                                   cgcCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTacga                                                                                                                               >  2:155753/1‑232 (MQ=255)
                                                                                                                                                                                                                   cgcCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTa                                                                                                                                  <  1:2225943/229‑1 (MQ=255)
                                                                                                                                                                                                                   cgcCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGcgccgc                                                                       >  1:572915/1‑288 (MQ=255)
                                                                                                                                                                                                                   cgcCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGccccgc                                                                       >  1:1060248/1‑288 (MQ=255)
                                                                                                                                                                                                                   cgcCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAA‑‑‑GCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATgg                                                                                                                                                                  <  2:1200875/194‑1 (MQ=255)
                                                                                                                                                                                                                    gcCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGcgccg                                                                        <  1:425376/286‑1 (MQ=255)
                                                                                                                                                                                                                        tccgtccgACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGAc                                                                                                                     <  2:1243677/237‑1 (MQ=255)
                                                                                                                                                                                                                        tccgtccgACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGAc                                                                                                                     >  1:1243677/1‑237 (MQ=255)
                                                                                                                                                                                                                        tccgtccgACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAAt                                                                 >  2:1648503/1‑289 (MQ=255)
                                                                                                                                                                                                                             ccgACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGt                                                                                                                                   >  2:2689200/1‑218 (MQ=255)
                                                                                                                                                                                                                                      gCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACCGCCCTTTCAGCCAGCCGCTGCGCATCAGCCCCGCACCCATGAGCATCACCCCt                                                    >  2:1481295/1‑288 (MQ=255)
                                                                                                                                                                                                                                         aTCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCa                                                                                                                                                                                                      >  2:748503/1‑139 (MQ=255)
                                                                                                                                                                                                                                            gCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCGGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGtt                                             <  1:1203664/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGtt                                             <  1:627209/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGtt                                             <  2:846849/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aaGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTgc                                           <  1:541881/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTgcca                                         >  1:1705953/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    cAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTgccagcca                                     >  2:673063/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ttAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATAc                                  <  1:700825/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGAATGGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACtgtg                              <  2:518491/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaGCGGCTCAATTGCGGCCAGAAACCATAACACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACtgtg                              <  1:70966/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTg                                                                                                        <  1:1656493/214‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTgcca                                         >  1:1272217/1‑277 (MQ=255)
                                                                                                                                                                                                                                                               ggCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGcc                          <  1:360762/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               ggCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGcc                          <  1:2316289/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               ggCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGcc                          <  1:1800971/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               ggCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGcc                          <  1:1730657/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               ggCTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTCCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGcc                          <  1:2721996/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCTATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGAc                                                                                                                     <  1:65898/196‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAgcgc                                                                          >  1:2685089/1‑239 (MQ=255)
                                                                                                                                                                                                                                                                 cTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCa                        >  1:307803/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 cTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCa                        >  1:431414/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 cTCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCa                        >  1:770735/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  tCAATTGCGGCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCAg                       <  1:2599625/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gCCAGAAGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCCTACTGTGCGCCCAGTGCCAGTaa              >  2:935008/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 aGCCATAAAACAGCGACGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCAGTGCCAGTAAACt           <  1:2453251/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                              |||                                                                                                                                                                                                                                                                                         
CCGGTCCGGCAGCACGCAAAGTTAACTGACGCCAGAGCCATTCCACCGGCCCCTGGCGGAAGTAACGCAGCCAGATAACAGAGAAGAGGATATTCGCCAGCCATACCGGAATAACAAACGCCAGCAGCTCCAGGCGGTCAAAATGCATAAACAAACCGAGGTGGTAAAAAAGCGTGGTACAAATCAGCGTTTGCAATAGATAGTTGGTCAGCGCCATCCGTCCGACGCAGGCGATCGCAAGCACCAGCTTAAAGCGGCTCAATTGCGGCCAGAAGCCATAAAACAGGCTCGCATAGCCAATCGCCTGAAACGGCGCACTCA‑GTTCCCGCGGCATTTGAAGTAAGAAGGCACACC‑AGCGATACGCCCAGTCCAGCTGCCATTGCAGGGCGATGGCAGGAAGGTTAATGGTCACCCCAATCGCCACCAGCACAAAACCAGTACGACGATAGTGACGTAAGCTGAACTGCCCTTTCAGCCAGCCGCTGCGCATCAGCGCCGCACCAATGAGCATCATCCCTGCCAGTTGCCAGCCATACTGTGCGCCCAGTGCCAGTAAACTGTTGCCAAC  >  CP042583/1816776‑1817343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A