Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,922,806 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,922,8060AT99.7% 770.7 / NA 321intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (168/152);  minor base G (1/0);  total (169/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,922,8070CG99.4% 750.6 / NA 321intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (167/151);  total (169/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,922,8080TA99.7% 768.3 / NA 321intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (169/151);  total (169/152)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 321 total aligned reads displayed.

CGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCGCTCATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGACTCCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAGCAGGCATATAGAGCGCCGCATGCCAGTCATTGAA  >  CP042583/1922529‑1923087
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
            caGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAAc                                                                                                                                                                                                                                                                     >  1:263624/1‑288 (MQ=255)
            caGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAAc                                                                                                                                                                                                                                                                     >  2:1459320/1‑288 (MQ=255)
               gACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTATCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGCGGATGCCGTAACgca                                                                                                                                                                                                                                                                  >  2:2232578/1‑288 (MQ=255)
                aCCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACgcag                                                                                                                                                                                                                                                                 <  1:2000879/288‑1 (MQ=255)
                aCCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACgca                                                                                                                                                                                                                                                                  <  1:1851703/287‑1 (MQ=255)
                 ccGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACgcagca                                                                                                                                                                                                                                                               >  2:786182/1‑289 (MQ=255)
                 ccGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCAGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACCCCGGTGGCCCCACGGTTGCCACGGAAGACTTTATCCTACATCCAGCCGCACAGCAGAGTGCCCAGATTACCTGCATATTCATAAAGGAAGTAGGCACAGAAGCATATCTCTACCGCGCAATGCTTACCCTCTTTTAG‑ATAAGTCGGTTATCAGTCTAGGAGGCAGTAAcacgcc                                                                                                                                                                                                                                                                >  2:541882/1‑283 (MQ=255)
                    tAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGAGTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCTGTGACCAGTCGAGGATGCCGTAACGCAGCAGAt                                                                                                                                                                                                                                                            >  1:290557/1‑289 (MQ=255)
                         cAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACTAGTCGAGGATGCCGTAACGCAGCAGATAAACg                                                                                                                                                                                                                                                       >  1:1013317/1‑289 (MQ=255)
                           ggAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGa                                                                                                                                                                                                                                                      >  1:1837674/1‑288 (MQ=255)
                            gAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTACCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCAAGGAGGATTAATCTAGCGCGAAATGCTTAACCTATGTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAACAGAac                                                                                                                                                                                                                                                    >  2:1119479/1‑289 (MQ=255)
                                      aaaaccATACAAATCATATCGACGTTTGGGTTACCTGCCGGGTTCATCCAGTAACCGATAGTCGCGATGGTAACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcga                                                                                                                                                                                                                                          <  2:1851969/284‑1 (MQ=255)
                                      aCAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcga                                                                                                                                                                                                                                          <  1:888065/289‑1 (MQ=255)
                                      aCAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcga                                                                                                                                                                                                                                          <  1:1194541/289‑1 (MQ=255)
                                       cAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgat                                                                                                                                                                                                                                         <  1:988316/289‑1 (MQ=255)
                                       cAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgat                                                                                                                                                                                                                                         <  2:263624/289‑1 (MQ=255)
                                          tCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgatggc                                                                                                                                                                                                                                      >  1:1390809/1‑289 (MQ=255)
                                                acatcttgtacaCGGTTGGTGTACCTACCGGGTTCATCCAGTAAACGGTAGTCGCGATGTTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCAGGGAAGACTTTCTACGACATCCAGCCGCACAGCAGAGTGCCAGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAAGGCTTAACCTCTTTCAG‑ATAAGGCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGata                                                                                                                                                                                                                                  <  2:102582/276‑1 (MQ=255)
                                                  aTCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATAc                                                                                                                                                                                                                               >  2:2214555/1‑288 (MQ=255)
                                                        tCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCAcagca                                                                                                                                                                                                                        >  1:796518/1‑289 (MQ=255)
                                                               ttGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgatggcg                                                                                                                                                                                                                                     >  1:1768446/1‑269 (MQ=255)
                                                                  ggTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCg                                                                                                                                                                                                               >  2:165987/1‑288 (MQ=255)
                                                                    gtACCTGACGGCTTCCACCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAACACGCCGGTTGCCCCACGGTTGACACGGAAGACTTTATCCGACATCCAGCCGAACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGc                                                                                                                                                                                                             <  2:279046/287‑1 (MQ=255)
                                                                     tACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAg                                                                                                                                                                                                           <  2:2398297/289‑1 (MQ=255)
                                                                         tGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCg                                                                                                                                                                                                               >  2:631541/1‑281 (MQ=255)
                                                                            cGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAgtacgta                                                                                                                                                                                                     <  1:1510188/288‑1 (MQ=255)
                                                                             gggTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGTGATGGCGATATACCACAGCAGTTTGTTCGGCAgtacgt                                                                                                                                                                                                      >  1:1059104/1‑286 (MQ=255)
                                                                                 tCATCCCGTAAACGAAACGCGCGGTGGTCAACAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCa                                                                                                                                                                                                <  2:798466/288‑1 (MQ=255)
                                                                                     ccAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGAtata                                                                                                                                                                                                                                >  1:868091/1‑252 (MQ=255)
                                                                                     ccAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAg                                                                                                                                                                                           >  2:1932084/1‑289 (MQ=255)
                                                                                               aTAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTc                                                                                                                                                                                  <  2:1058344/288‑1 (MQ=255)
                                                                                                  gTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCg                                                                                                                                                                              >  2:36083/1‑289 (MQ=255)
                                                                                                             cACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTg                                                                                                                                                                    <  1:3599/288‑1 (MQ=255)
                                                                                                                     tCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCt                                                                                                                                                                                    >  2:686354/1‑264 (MQ=255)
                                                                                                                        tAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTc                                                                                                                                                        >  2:742054/1‑289 (MQ=255)
                                                                                                                             aaaaCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTtat                                                                                                                                                   >  1:308411/1‑289 (MQ=255)
                                                                                                                               aaCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgatggcga                                                                                                                                                                                                                                    <  2:856401/206‑1 (MQ=255)
                                                                                                                               aaCGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAg                                                                                                                                                 >  1:91133/1‑289 (MQ=255)
                                                                                                                                 cGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAgtacgta                                                                                                                                                                                                     <  1:593535/235‑1 (MQ=255)
                                                                                                                                   acagTTGCTCCACCGTTGACACGGAAGACTTTAACCGACAACCAACCGCACAGCCGAGTGCCCGGAATACATGCATATTCATAACAGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTCACCAGTCGAGGATGCCGTAACTCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAgtcgt                                                                                                                                             <  1:1426844/286‑1 (MQ=255)
                                                                                                                                       ttGCCCCACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCgg                                                                                                                                         >  1:509233/1‑289 (MQ=255)
                                                                                                                                            ccACGGTTGCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAAt                                                                                                                                    <  1:2579933/289‑1 (MQ=255)
                                                                                                                                                    gCCACGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGATTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTGATAGTCGTCTGGATACACCTTTTTg                                                                                                                            >  2:17554/1‑289 (MQ=255)
                                                                                                                                                       aCGGAAGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGt                                                                                                                           >  2:167432/1‑287 (MQ=255)
                                                                                                                                                           aaGACTTTATCCGACATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTta                                                                                                                                                    <  2:927747/258‑1 (MQ=255)
                                                                                                                                                                     ccgacaccaaGCCGCAAAGCGGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGTCCAGTCAAGGATGCCATAACGCAGCAGGTAAACGAACACGTTGGCGATGGCGATATACCACCGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGATTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATcggcgg                                                                                                           <  2:1201244/280‑1 (MQ=255)
                                                                                                                                                                       gacATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCa                                                                                                         <  1:1932084/287‑1 (MQ=255)
                                                                                                                                                                         cATCCAGCCGCACAGCAGAGTGCCCGGAATCCCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGACGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGACAGCTCCTGTTCCGCTTTTTCGTTATAGTCTTCCGGATAACCTTTTTTGTACCCCTCGATAGTCGGCac                                                                                                        >  2:1589084/1‑287 (MQ=255)
                                                                                                                                                                         cATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCaa                                                                                                        >  1:2191926/1‑288 (MQ=255)
                                                                                                                                                                            ccgcccgaaaagcagAGTGCCCGGAATACCAGCATATTCATAAAGGAAGTAGGACAAGGAGGTTTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCca                                                                                                    <  2:885923/279‑1 (MQ=255)
                                                                                                                                                                            ccAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCca                                                                                                    <  2:2374781/289‑1 (MQ=255)
                                                                                                                                                                                 cGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCcaca                                                                                                  <  1:1587402/286‑1 (MQ=255)
                                                                                                                                                                                 cGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCcaca                                                                                                  <  1:2214553/286‑1 (MQ=255)
                                                                                                                                                                                 cGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAg                                                                                                 <  1:1347037/287‑1 (MQ=255)
                                                                                                                                                                                   cacaGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGc                                                                                                                                                                                                             >  2:423645/1‑177 (MQ=255)
                                                                                                                                                                                   cacaGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGAtt                                                                                             >  1:1035959/1‑289 (MQ=255)
                                                                                                                                                                                   cacaGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGAtt                                                                                             >  2:32626/1‑289 (MQ=255)
                                                                                                                                                                                     cagcagAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGc                                                                                           >  2:53193/1‑289 (MQ=255)
                                                                                                                                                                                      cgcagAGTGCCAGGAATACCTGCATTTTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCg                                                                                          <  1:696010/288‑1 (MQ=255)
                                                                                                                                                                                        cagAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAgtacgta                                                                                                                                                                                                     >  2:1409104/1‑180 (MQ=255)
                                                                                                                                                                                             tGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATc                                                                                   >  1:462816/1‑289 (MQ=255)
                                                                                                                                                                                                ccGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgat                                                                                                                                                                                                                                         <  1:2395213/136‑1 (MQ=255)
                                                                                                                                                                                                ccGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATcgc                                                                                 >  2:2046518/1‑288 (MQ=255)
                                                                                                                                                                                                ccGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATcgc                                                                                 >  1:417692/1‑288 (MQ=255)
                                                                                                                                                                                                ccGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATcgc                                                                                 >  1:2050401/1‑288 (MQ=255)
                                                                                                                                                                                                  ggAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTAct                                                                                                                        <  2:399456/247‑1 (MQ=255)
                                                                                                                                                                                                  ggAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGca                                                                              >  1:835861/1‑289 (MQ=255)
                                                                                                                                                                                                    aaTACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCg                                                                                                                                                       >  2:1783835/1‑214 (MQ=255)
                                                                                                                                                                                                    aaTACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGcat                                                                             <  1:2528823/288‑1 (MQ=255)
                                                                                                                                                                                                       aCCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGcatcat                                                                          >  2:2469374/1‑288 (MQ=255)
                                                                                                                                                                                                         cTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCg                                                                                                                                                                                 <  1:2244662/183‑1 (MQ=255)
                                                                                                                                                                                                              tatTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTtggcgatgg                                                                                                                                                                                                                                       >  1:1097521/1‑124 (MQ=255)
                                                                                                                                                                                                              tatTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAg                                                                   >  1:28163/1‑288 (MQ=255)
                                                                                                                                                                                                              tatTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAg                                                                   >  1:1268111/1‑288 (MQ=255)
                                                                                                                                                                                                                   aTAAAGGAAGTAGGCCCAGGAGGATCTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCCGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATCATCATTTTTGTACTCTTCTATTGGCCGCAAGACACAGGATCTGGGGGCATCGAGCAACATCACAATgggcact                                                             >  2:1893542/1‑284 (MQ=255)
                                                                                                                                                                                                                    tAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCcac                                                                                                   >  1:534917/1‑250 (MQ=255)
                                                                                                                                                                                                                      aaGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGaataat                                                          <  1:18808/289‑1 (MQ=255)
                                                                                                                                                                                                                          aaGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGc                                                        <  2:889576/287‑1 (MQ=255)
                                                                                                                                                                                                                           aGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTtata                                                                                                                                                  <  2:2292396/196‑1 (MQ=255)
                                                                                                                                                                                                                           aGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAAt                                                                                                                                    >  2:2685837/1‑210 (MQ=255)
                                                                                                                                                                                                                           aGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAAt                                                                                                                                    <  1:2685837/210‑1 (MQ=255)
                                                                                                                                                                                                                           aGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATTcca                                                      >  1:1740171/1‑288 (MQ=255)
                                                                                                                                                                                                                           aGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGcca                                                      >  1:439577/1‑288 (MQ=255)
                                                                                                                                                                                                                               ggCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTTTCGGGCATCTTCGCAACGGCGAATAATGCCACCAGa                                                 >  2:569486/1‑289 (MQ=255)
                                                                                                                                                                                                                                 cccAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGaa                                                <  2:2191926/288‑1 (MQ=255)
                                                                                                                                                                                                                                    aggaggATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAg                                                                                                 <  1:568575/236‑1 (MQ=255)
                                                                                                                                                                                                                                           tttATCTAGCGCGAAATGCTTAACCTCTTTCAGAATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGa                                                                                               >  2:2541569/1‑232 (MQ=255)
                                                                                                                                                                                                                                           tttATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCa                                                                                                         <  2:1281625/221‑1 (MQ=255)
                                                                                                                                                                                                                                           tttATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCa                                                                                                         >  1:1281625/1‑221 (MQ=255)
                                                                                                                                                                                                                                            ttATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAg                                    <  1:167432/289‑1 (MQ=255)
                                                                                                                                                                                                                                            ttATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAg                                    <  1:2469374/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 tAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAGCAGGc                               <  2:1547387/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 tAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAGCAGGc                               <  1:1614792/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    cgcgAAATGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGaataat                                                          >  1:679761/1‑259 (MQ=255)
                                                                                                                                                                                                                                                        aaaTGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCa                                         >  1:37019/1‑272 (MQ=255)
                                                                                                                                                                                                                                                         aaTGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCTGCAGATAAACGAACACGGTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAGCAGGCATATagag                       <  1:1552359/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         aaTGCTTAACCTCTTTCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAg                                    <  1:2341219/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ttCAG‑ATAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGACCACGTTGGCGATGGCGATATACCACAGCAGTTTGATCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCGCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTTTACTCTTCGATCGGCGGCAAGCCACACGATTGCGGGGTATCGAGCATCATCGCAAAGTCGAATAATGCCACCAGAATCGCGCAGAACGCAGGCATATAGAGCGCCGCACGCCAgg         >  2:1963563/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             aTAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCa                                                                                                         <  1:2112378/188‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aTAAGTCGGTGACCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCa                                                                                                         >  2:2112378/1‑188 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
CGATCAGCATCACAGGACCGTAGATCAGGAAGCCGATAACAATCATACAAATCATATCGACGGTTGGGTTACCTGCCGGGTTCATCCAGTAAACGATAGTCGCGATGGTCACCAGTGTCATAAAGAAAACGCCGGTTGCCCCACGGTTGCCACGGAAGACTTTATCGCTCATCCAGCCGCACAGCAGAGTGCCCGGAATACCTGCATATTCATAAAGGAAGTAGGCCCAGGAGGATTTATCTAGCGCGAAATGCTTAACCTCTTTCAG‑ATAAGTCGGACTCCAGTCGAGGATGCCGTAACGCAGCAGATAAACGAACACGTTGGCGATGGCGATATACCACAGCAGTTTGTTCGGCAGTACGTACTGCATGAAGATTTGCTTCGCCGTCAGCTCCTGTTCCGCTTTTTCGTTATAGTCGTCCGGATAATCATTTTTGTACTCTTCGATCGGCGGCAAGCCACAGGATTGCGGGGTATCGCGCATCATCGCAAAGGCGAATAATGCCACCAGAATGGCGCAGAAAGCAGGCATATAGAGCGCCGCATGCCAGTCATTGAA  >  CP042583/1922529‑1923087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A