Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,961,828 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,961,8280GC99.4% 824.8 / NA 351intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (162/185);  total (163/188)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,961,8290CG98.0% 792.9 / NA 351intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (6/1);  new base G (157/186);  total (163/188)
Fisher's exact test for biased strand distribution p-value = 5.31e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,961,8300TA99.1% 828.8 / NA 351intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (162/185);  minor base C (1/2);  total (163/188)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 351 total aligned reads displayed.

AACCACGGCACCCACCAGCCACCACAAGTGTGCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATGCTCATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGAACTGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGT  >  CP042583/1961549‑1962108
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
aaCCACGGCACCCACCAGCCACCACAAGTGTGCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCg                                                                                                                                                                                                                                                                                 <  1:2060991/289‑1 (MQ=255)
      gccacccaccAGCCAACACAAGCGGGCCTGGACACCGACCACCAGCCCGTAGACCTTACCGACAAAGCCCACGATAATC‑GGGATACCGGACAGAGACAGCATCAACACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAGCCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGtt                                                                                                                                                                                                                                                                           <  2:1666431/287‑1 (MQ=255)
        caccccccAGCCACCACAAGGGGGCCTGGCAACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGttt                                                                                                                                                                                                                                                                          <  2:1943955/288‑1 (MQ=255)
        cacccaccAGCCACCACAAGTGTGCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCCACATCTCGCCGGttt                                                                                                                                                                                                                                                                          >  1:2286984/1‑288 (MQ=255)
                         aaGTGTGCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTAACGCTTCCATCGACATCCCGCCGGTTTTCAGCGCAACCAGCGCt                                                                                                                                                                                                                                                         >  2:1357844/1‑288 (MQ=255)
                         aaGGGTGCCGGGACCCCGACCGGCGGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATAACGGCCAGAGACAACATCATCACCGTCATCACTGCCGGGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCt                                                                                                                                                                                                                                                         <  2:2350912/288‑1 (MQ=255)
                          aGTGTGCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTAc                                                                                                                                                                                                                                                       <  1:355124/289‑1 (MQ=255)
                              tgCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCCTCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTCAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCCTCGACATCTCGCCGGTTTGCAGCGCAATCCGCCCTACcagc                                                                                                                                                                                                                                                   >  2:2633770/1‑289 (MQ=255)
                                ccTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACcagcag                                                                                                                                                                                                                                                 >  2:718246/1‑289 (MQ=255)
                                ccTGGACACCGACCGCCAGCACATAGAACTTACCGTTAAAGCCCAGAGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACTGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACcagca                                                                                                                                                                                                                                                  <  2:2435171/288‑1 (MQ=255)
                                 cgggACACCGCCCGCCAGCAGTGAGAATGTACAGCTAAAGCCCGGCG‑AATCGGGGATACAGGGCATGAACAGAATAAGCACCGTGTGCACGGACGCGAGGATCGGACGAGGGCAGAAAAGACCGCGGGAAGAGAACGGGGAATCAGCATCAGGGCCACGATACGGGCCGGACATCAGGGTGACAACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCGGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGa                                                                                                                                                                                                                                                <  2:1492089/287‑1 (MQ=255)
                                   ggACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCCCGCCGGTTTGCAGCCCAATCAGCGCTACCAGCAGAt                                                                                                                                                                                                                                               >  1:2350912/1‑288 (MQ=255)
                                     acacCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAg                                                                                                                                                                                                                                             <  1:845227/288‑1 (MQ=255)
                                       accgaccgCCAGCACGTAGAACGTACCGATAAAGCCCAGCGTCATC‑GGTATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCg                                                                                                                                                                                                                                          <  1:2541433/289‑1 (MQ=255)
                                            ccgCCAGCCCGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTg                                                                                                                                                                                                                                     <  1:2217461/289‑1 (MQ=255)
                                                   aaccgaGACCTTAACGATATAGCCAGGGGGCAGC‑GGGATACCGGCCAGAGACAGCATCATCACCGTGATCACGGCCGCGATGATCGGACGATGCCAGAACGGACCGCGGTAAGGGAACAGGGAAGCAGCGTCCGGGACACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTgagagag                                                                                                                                                                                                                               <  2:1982737/283‑2 (MQ=255)
                                                    aCGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGAt                                                                                                                                                                                                                               <  1:1615090/287‑1 (MQ=255)
                                                      gTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTCCCATCGACCTCTCGCCGGTTTGCAGCGCAATCAGCGCCACCAGCCGATAGCCGAGGGGAGAGAAAGag                                                                                                                                                                                                                           >  2:2693767/1‑288 (MQ=255)
                                                              tACCGATAAAGCGCAGCGTCATC‑GGGATCCCGGCCAGAGACAGCATCATCACGGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAAcc                                                                                                                                                                                                                   <  1:1122926/289‑1 (MQ=255)
                                                               aCCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCCTCGACATCTCGCCGGTTTGCAGCGCAATCAGCCCTACCAGCAGATAGCCGAGGTGAGGGATAGatgagtaaacg                                                                                                                                                                                                                  >  2:1296644/1‑279 (MQ=255)
                                                                    tAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGCGCGATAGCAGAGTAACCGAGCAg                                                                                                                                                                                                             >  2:769267/1‑289 (MQ=255)
                                                                              gggcATC‑GGGATACCGTCCAGAGACAGCATCAGAACCGTCAGCACTGCCGCGGAGATCGGACGATGCGAGAACGGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGat                                                                                                                                                                                                    <  2:2286984/285‑1 (MQ=255)
                                                                              cGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGGGTGata                                                                                                                                                                                                   >  1:654641/1‑289 (MQ=255)
                                                                               gTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGatat                                                                                                                                                                                                  <  1:402701/289‑1 (MQ=255)
                                                                                   tC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCg                                                                                                                                                                                                                                          <  1:1897588/245‑1 (MQ=255)
                                                                                   tC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGGGTAACCGAGCAGACGCATGGTATTgg                                                                                                                                                                                               >  2:1339808/1‑288 (MQ=255)
                                                                                         aTACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAgc                                                                                                                                                                                                                                                            <  2:1808108/222‑1 (MQ=255)
                                                                                             cGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCTGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGGCCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAg                                                                                                                                                                                     <  1:2034294/289‑1 (MQ=255)
                                                                                               gCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCa                                                                                                                                                                                                              >  2:2257138/1‑262 (MQ=255)
                                                                                                    ggaCGGCATCAGCACGGTCATCACCGCCGCGAGGATCGGGCGATGGCAGGACAGGCGGCGGTAAGAGAACAGGGAATCAGAACCCGGGGCAGGATGCGGGCTGGGCCTCCGGGTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAGCCGGCCAGGTGAACCCCTGCCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGGTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAAGCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCAt                                                                                                                                                                               <  2:2495367/287‑1 (MQ=255)
                                                                                                     gaCAGCATCATCACCGACATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCCGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCa                                                                                                                                                                                <  1:1352667/286‑1 (MQ=255)
                                                                                                     aaCAGCATCATCCCCGTCATCACAGCCGCGAGGATCGGACGAGGCCAGAGCAGACCGCGGTAAGGGAACAGGGAATCAGCATCCGGGCCCCGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCAt                                                                                                                                                                               <  2:1123193/286‑1 (MQ=255)
                                                                                                          catcatCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGatga                                                                                                                                                                                                                         >  1:1821023/1‑237 (MQ=255)
                                                                                                           atcatcACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCAt                                                                                                                                                                               <  1:2693767/281‑1 (MQ=255)
                                                                                                                    gTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTc                                                                                                                                                                                             >  1:452854/1‑258 (MQ=255)
                                                                                                                       atcaCTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAgcg                                                                                                                                                                                                                                                           >  1:25024/1‑193 (MQ=255)
                                                                                                                        tcaCTGCCGCGAGGATCGGACGATGTCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGACATTGGTCTGGATCAGCGCCATCAGGTTACCGACGATGATGGa                                                                                                                                                          >  1:2128210/1‑289 (MQ=255)
                                                                                                                        tcaCTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGc                                                                                                                                                                                                                                            >  1:304623/1‑207 (MQ=255)
                                                                                                                            tGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCa                                                                                                                                                      >  1:2237629/1‑289 (MQ=255)
                                                                                                                            tGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCACGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCACACGTTTGAGATTGGTCTGGCTCCGCGCCACACGGTTGCCGAAGCTTATGGAGGCa                                                                                                                                                      >  2:442401/1‑289 (MQ=255)
                                                                                                                             gCCTCGAGGATCGCACGTGGACAAAACACACCGCGGGAAAAGACCAGGGAACCAGCAGCCGGGCCAGGATACGGGCTGGACTACAGACTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGACAGCCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGGGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCa                                                                                                                                                      <  2:420896/288‑1 (MQ=255)
                                                                                                                             gCCGCGAGGAACGTACGAGGCCAGAAAGGAGCGCGGTAAGCGAACAGGGAAGCAGCATCCGGGCCAAGATACGGGCTGGGCATGAGGCGGGGCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCGCTACGGCTTCCATCGACATCTCGCAGGTTTGCAGCGCAATCAGGGCTACCAGCAGATAGACGAGGTGAGAGATAGATGAGTAACCGGGCAGACGTTTGATATTGGTCTGGCTCAGGGCCATCTGGTTACCGAAGATGATGGAGGCa                                                                                                                                                      <  2:1756819/288‑1 (MQ=255)
                                                                                                                             ccggcagggATCGGACGATGCCGGACGAGACCGCGGGAGGGGAACGGGGAATCGGCATCCGGGCCAGGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCa                                                                                                                                                      <  2:54097/281‑1 (MQ=255)
                                                                                                                              ccGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCaaa                                                                                                                                                    >  1:1679643/1‑289 (MQ=255)
                                                                                                                                      aTCGAACGAGGCCAGAACAGACAGCGGTAAGAGAACAGGGAATCAGCAACCGGGCCACGATACGGGCTGGACATCAGGCGGGCCACGCCGAAGGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                             <  2:567858/288‑1 (MQ=255)
                                                                                                                                        cGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATc                                                                                                                                          >  1:1800956/1‑289 (MQ=255)
                                                                                                                                          gACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGatgagtaa                                                                                                                                                                                                                     >  1:1875897/1‑205 (MQ=255)
                                                                                                                                          gACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGatgagtaa                                                                                                                                                                                                                     <  2:1875897/212‑8 (MQ=255)
                                                                                                                                          gACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGGAAATct                                                                                                                                         >  2:126183/1‑287 (MQ=255)
                                                                                                                                          gACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGGGAGATATAGAGTAGTAACCGAGCAGCCGTTTGATATTGGTCTGGCTCAGCGACACCAGGTTACCGAAGATGATGGAAGCAAATGCGagtagtg                                                                                                                                         >  2:2454402/1‑282 (MQ=255)
                                                                                                                                               tGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAgcg                                                                                                                                                                                                                                                           <  2:1604803/169‑1 (MQ=255)
                                                                                                                                                         gACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAg                                                                                                                                                                                                             >  2:1210484/1‑205 (MQ=255)
                                                                                                                                                         gACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                             <  2:2154123/269‑1 (MQ=255)
                                                                                                                                                         gACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                             >  1:2154123/1‑269 (MQ=255)
                                                                                                                                                          aCCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGCGGCTGCTGAACAGATAACCGGCAAGGTAAACCACTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACGAAGCAGACGTTTGATAGTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGCGGATGGAGGCAAAGGCGCTAATCGCCAGCACCACGCGact                                                                                                                         >  2:1134055/1‑286 (MQ=255)
                                                                                                                                                          aCCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATc                                                                                                                                                                                                                                                               <  2:2711715/154‑1 (MQ=255)
                                                                                                                                                          aCCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTgag                                                                                                                                                                                                                                   >  1:2598483/1‑182 (MQ=255)
                                                                                                                                                          aCCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCa                                                                                                                                                                                <  1:8309/233‑1 (MQ=255)
                                                                                                                                                          aCCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAAACGTTTGATATTGGTCTGGCTCAGCGGCAACAGGTTACCGAAGATGATGGAGGCAAAGGCGATAAACGCCATCAACACGCGAAt                                                                                                                         >  2:873975/1‑288 (MQ=255)
                                                                                                                                                               ggTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTg                                                                                                                                                                                                                                     >  2:803482/1‑175 (MQ=255)
                                                                                                                                                                      gaACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGc                                                                                                                                                                                                                                            >  1:535114/1‑161 (MQ=255)
                                                                                                                                                                       aaCAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGc                                                                                                                                        <  1:1062932/260‑1 (MQ=255)
                                                                                                                                                                        aCAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTcac                                                                                                           >  2:461753/1‑288 (MQ=255)
                                                                                                                                                                         cAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAgg                                                                                                                                                  <  2:552007/248‑1 (MQ=255)
                                                                                                                                                                                tCAGCATCCGGGCCCGCATCCGGGCTGGACATCAGGCTGAACACGCCGAACGGGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTg                                                                                                  <  2:647287/289‑1 (MQ=255)
                                                                                                                                                                                 cAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTg                                                                                                               <  2:2551540/275‑1 (MQ=255)
                                                                                                                                                                                      tCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGtt                                                                                                                                                                                                        <  1:261150/181‑1 (MQ=255)
                                                                                                                                                                                      tCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCg                                                                                                     >  2:2067483/1‑280 (MQ=255)
                                                                                                                                                                                          ggCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGa                                                                                         >  1:2717240/1‑288 (MQ=255)
                                                                                                                                                                                           gCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCa                                                                                                                                                                                      <  1:559363/194‑1 (MQ=255)
                                                                                                                                                                                               cGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAAAAGAc                                                                                   >  1:2705161/1‑289 (MQ=255)
                                                                                                                                                                                                gATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCATCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTg                                                                                                               <  1:917319/260‑1 (MQ=255)
                                                                                                                                                                                                 agaCGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCGGCTGAACAGAAAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGGAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGGAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACg                                                                                  <  2:256819/286‑1 (MQ=255)
                                                                                                                                                                                                     gggCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTg                                                                                                  <  1:321296/268‑1 (MQ=255)
                                                                                                                                                                                                          ggACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTAACAGCAACTAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTTTGGCTCAGAGCCATCAGGTTACCGAAGATGATGGAGGCAAACGCGAGAATCGCCAGCACCACGCGAATCGCTCAGCTGTCACACACCGGCGCGTAGAGGAACAGACGCATcaccac                                                                         >  2:350191/1‑288 (MQ=255)
                                                                                                                                                                                                           gACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGGTTCGCTGACCCCCACCGGTGCGTAGAGGAACAgccctgtcccttca                                                                        >  2:2175406/1‑275 (MQ=255)
                                                                                                                                                                                                           gACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTa                                                                                              <  1:950128/266‑1 (MQ=255)
                                                                                                                                                                                                                 aGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGatat                                                                                                                                                                                                  >  2:2056580/1‑160 (MQ=255)
                                                                                                                                                                                                                        ccACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTCCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATCGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGGACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGCGGAACCGACGCATCACCAGCCCGCAGATcgcg                                                            >  2:1795665/1‑287 (MQ=255)
                                                                                                                                                                                                                           cGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                             >  1:734161/1‑203 (MQ=255)
                                                                                                                                                                                                                            gCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGAtttt                                                       >  1:1556243/1‑288 (MQ=255)
                                                                                                                                                                                                                            gCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATAGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTc                                                                                                             >  2:315931/1‑234 (MQ=255)
                                                                                                                                                                                                                             ccGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGAtttt                                                       >  1:1299942/1‑287 (MQ=255)
                                                                                                                                                                                                                                 aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                             >  2:1418931/1‑197 (MQ=255)
                                                                                                                                                                                                                                 aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGcgcg                                                  >  1:1240040/1‑288 (MQ=255)
                                                                                                                                                                                                                                 aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCg                                                  <  1:2641192/288‑1 (MQ=255)
                                                                                                                                                                                                                                 aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCg                                                  <  1:1022638/288‑1 (MQ=255)
                                                                                                                                                                                                                                 aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGACAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGATTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCACCGTCACCCACCGGTGCGTAGCGTACCAGACGCAACACCACACCGCAGATAGCGACTATACTCg                                                  >  2:89469/1‑288 (MQ=255)
                                                                                                                                                                                                                                      cggaggacgctgAACGGAGATCCGGCACGGTCAACCCGTACCGATTCCGTCTACATCGCGCCGGTTTGAAGCAGAATCAGCCCTACCAGCGGATAGCCGAGGTGGGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGGGGCGAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCAGCACCACACCGAAGATAGCGATTTTGCTCGCCGTc                                             <  2:1049927/280‑1 (MQ=255)
                                                                                                                                                                                                                                                 gAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTg                                 <  1:1296644/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       aTAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAg                                                                                                                                                                                                                                                                      >  1:780176/1‑54 (MQ=255)
                                                                                                                                                                                                                                                       aTAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTg                                                                                                               <  2:1561458/205‑1 (MQ=255)
                                                                                                                                                                                                                                                       aTAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTcacccac                                                                                                       <  2:832991/213‑1 (MQ=255)
                                                                                                                                                                                                                                                       aTAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCACCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAAcc                           >  1:1388916/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              gCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATcac                                                                            >  1:1574372/1‑233 (MQ=255)
                                                                                                                                                                                                                                                              gCCAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAg                    >  2:92981/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                cAGGTAAACCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGgc                  <  1:1431525/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tAAACCCCTACCGCTTACATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGgcg                 <  1:126183/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aaaCCCCTACCGCTTCCCTCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGcc             <  1:1132797/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aaaCCCCTACCGCTTCCATCGACATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGgcgcgc              <  1:1458102/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
AACCACGGCACCCACCAGCCACCACAAGTGTGCCTGGACACCGACCGCCAGCACGTAGAACTTACCGATAAAGCCCAGCGTCATC‑GGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATGCTCATCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGAACTGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGGTGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGT  >  CP042583/1961549‑1962108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A