Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,961,891 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,961,8910AT98.8% 763.6 / NA 329intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (151/173);  minor base G (1/3);  total (153/176)
Fisher's exact test for biased strand distribution p-value = 6.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,961,8920CG99.4% 770.8 / NA 330intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (152/176);  minor base T (2/0);  total (154/176)
Fisher's exact test for biased strand distribution p-value = 2.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,961,8930TA99.1% 768.6 / NA 330intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (150/176);  minor base G (3/0);  total (154/176)
Fisher's exact test for biased strand distribution p-value = 9.95e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 330 total aligned reads displayed.

TACCGATAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATGCTCA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGAACTGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCAGAGAGAGTTTGAAGCCGAGGCCAACAATCAT  >  CP042583/1961611‑1962166
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                  
    gATAAAGCCCGGGGTGATCGGGATACCGGCCAGAGACAGCATAGTCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGc                                                                                                                                                                                                                                                                          <  2:1972432/289‑1 (MQ=255)
      tAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGTAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAg                                                                                                                                                                                                                                                                        <  1:1888639/289‑1 (MQ=255)
      tAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGCGCGATAGCAGAGTAACCGAGCAg                                                                                                                                                                                                                                                                        >  2:769267/1‑289 (MQ=255)
      tAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCa                                                                                                                                                                                                                                                                         <  1:493498/288‑1 (MQ=255)
      tAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAg                                                                                                                                                                                                                                                                        <  1:676142/289‑1 (MQ=255)
      tAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAg                                                                                                                                                                                                                                                                        <  1:2633770/289‑1 (MQ=255)
           cccATCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGtt                                                                                                                                                                                                                                                                   <  1:1044681/289‑1 (MQ=255)
           cccAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCCACA‑TCTCGCCGGGTTGCAGCGCAAACAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGGATAACCGAGCAGACggt                                                                                                                                                                                                                                                                   >  2:1844153/1‑287 (MQ=255)
            ccAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGtt                                                                                                                                                                                                                                                                   <  1:1566273/288‑1 (MQ=255)
                 gTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGatat                                                                                                                                                                                                                                                             <  1:402701/289‑1 (MQ=255)
                     tCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGCGAGAGATAGATGAATAACCGAACAGACGTTTGCAATTgg                                                                                                                                                                                                                                                          >  2:853903/1‑288 (MQ=255)
                     tCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGAGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCGGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCGGCGCAATCCGCGCTAACAGCAGGTAGCCGCGGTGAGAGATAGCTGAGTAACCGAGCAGTCGGTTGGTCTTgg                                                                                                                                                                                                                                                          >  1:1125577/1‑288 (MQ=255)
                      cGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTc                                                                                                                                                                                                                                                        <  1:1554795/289‑1 (MQ=255)
                      cGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTc                                                                                                                                                                                                                                                        <  1:1738224/289‑1 (MQ=255)
                              cGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCTGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGGCCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAg                                                                                                                                                                                                                                                <  1:2034294/289‑1 (MQ=255)
                                     ggaCGGCATCAGCACGGTCATCACCGCCGCGAGGATCGGGCGATGGCAGGACAGGCGGCGGTAAGAGAACAGGGAATCAGAACCCGGGGCAGGATGCGGGCTGGGCCTCCGGGTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAGCCGGCCAGGTGAACCCCTGCCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGGTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAAGCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCAt                                                                                                                                                                                                                                          <  2:2495367/287‑1 (MQ=255)
                                      gaCAGCATCATCACCGACATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCCGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCa                                                                                                                                                                                                                                           <  1:1352667/286‑1 (MQ=255)
                                              catcaCCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TATCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCg                                                                                                                                                                                                                                <  1:1241585/289‑1 (MQ=255)
                                                     gTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTc                                                                                                                                                                                                                                                        >  1:452854/1‑258 (MQ=255)
                                                     gTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAgatga                                                                                                                                                                                                                         >  1:892803/1‑289 (MQ=255)
                                                             tGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCACGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCACACGTTTGAGATTGGTCTGGCTCCGCGCCACACGGTTGCCGAAGCTTATGGAGGCa                                                                                                                                                                                                                 >  2:442401/1‑289 (MQ=255)
                                                              ccggcagggATCGGACGATGCCGGACGAGACCGCGGGAGGGGAACGGGGAATCGGCATCCGGGCCAGGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCa                                                                                                                                                                                                                 <  2:54097/281‑1 (MQ=255)
                                                               ccGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCaaa                                                                                                                                                                                                               >  2:818298/1‑289 (MQ=255)
                                                               ccGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCaaa                                                                                                                                                                                                               >  1:1679643/1‑289 (MQ=255)
                                                               ccGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACAGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCCATCAGCGCTACCAGCAGCTCGCCGAGGGGAGAGATAGATGAGGAAACGAGCAGACGGTTGACATGGGTCTGGTCCAGCGCCATCAGTGTACCGCAGATGATGGAGGCaaa                                                                                                                                                                                                               >  2:2528362/1‑289 (MQ=255)
                                                                  cgAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGc                                                                                                                                                                                                            >  2:2641192/1‑289 (MQ=255)
                                                                       gcgggcggagaccagaccagaCCGGGGTAGGGGAAAGGGGAATCAGCGTCCGGGCAAGGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  2:1546776/277‑1 (MQ=255)
                                                                       agcGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  1:1966759/286‑1 (MQ=255)
                                                                       aTCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  1:1191698/288‑1 (MQ=255)
                                                                       aTCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  2:601134/288‑1 (MQ=255)
                                                                       aTCGGACGATGCAAGACCAGCCCGCGGTAAGAGAACAGGGAATCATCAGCCGGGACACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  1:2124743/288‑1 (MQ=255)
                                                                                          gACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCa                                                                                                                                                                                                                                                 <  1:432372/228‑1 (MQ=255)
                                                                                              gcgGTAAGAGAACAGGGACTCAGCACCCGGGCCACGAGACGGGCTGGACACCAGGCTGACCACGCCGAACGCGCCGAGGCTGCGGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAAtcgct                                                                                                                                                                                <  1:2508062/289‑1 (MQ=255)
                                                                                                  aaaGGGAACAGGCAGTCGGCAACCGGGCCACGATACGGGCTGGACATCAGGCGGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACG‑TGTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTGTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAAtcgcttcg                                                                                                                                                                             <  2:273694/287‑1 (MQ=255)
                                                                                                          cAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAgg                                                                                                                                                                                                             <  2:552007/248‑1 (MQ=255)
                                                                                                              gAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTcacccac                                                                                                                                                                  <  1:818298/287‑1 (MQ=255)
                                                                                                                 tgcgCAGCCGGGCCGCGAGACGGGCTGGAAGTCCGGCTGACCACGCGGAACGCGCAGAGGCGGCTGAACAGATAACAGGCCAGGTAAACCCCTACCGCTGCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGGTATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCGCGCGAATCGCTTCGCTGTCACCCACCGG‑Tg                                                                                                                                                            <  2:1781831/286‑1 (MQ=255)
                                                                                                                  cAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTg                                                                                                                                                                          >  1:2551540/1‑275 (MQ=255)
                                                                                                                      aTCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTa                                                                                                                                                        <  2:1679643/288‑1 (MQ=255)
                                                                                                                         cGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAgg                                                                                                                                                    >  1:1299443/1‑289 (MQ=255)
                                                                                                                           ggCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTcacccac                                                                                                                                                                  <  2:269729/274‑1 (MQ=255)
                                                                                                                               gaggcaCGGGCTGGACATGAGACGGACCAGGACAAACGCGCCGATGCTGCTGAACAGATCACCGGCGAGGTAAACCCCTACCGCTTCAGTCGACA‑TCTCGCTGGTTTGCAGCGCAATCAGCGCTACCAGCAGGTAGCCGAGGGGAGAGATAGAGGAGTAGCCGAGCAGACGTGTGATATTGGTGTGGATCAGCGGCATCAGGTGACCGAAGATGGTGGAGGGGAGGGCGTTAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGa                                                                                                                                              <  2:2565593/284‑1 (MQ=255)
                                                                                                                                cGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAAAAGAc                                                                                                                                             >  1:2705161/1‑289 (MQ=255)
                                                                                                                                    aCGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCAt                                                                                                                                         <  1:2731269/289‑1 (MQ=255)
                                                                                                                                      gggCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑Tg                                                                                                                                                            <  1:321296/268‑1 (MQ=255)
                                                                                                                                      gggCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATACTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑Tg                                                                                                                                                            >  2:321296/1‑268 (MQ=255)
                                                                                                                                        gcgggacgaccggCTGACCCCGACGAAGGCGCCGAGGCGGCTGAACAGGTAACCGGCCAGGTAAACCCCTACGGCGTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGAGAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATcac                                                                                                                                      <  2:2061231/277‑1 (MQ=255)
                                                                                                                                        gcgagacagaacgCTGACAACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑GCTCGCCGGTTTGCAGCGCAATCAGCGATACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATcac                                                                                                                                      <  2:1798300/276‑1 (MQ=255)
                                                                                                                                           ggACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGAACCACGCGAATCGCTTCGCTGTC‑CCCACCGGCTGCTGCGAGGAACAGAACCCTcaccac                                                                                                                                   >  2:2282655/1‑288 (MQ=255)
                                                                                                                                            gACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTa                                                                                                                                                        >  2:950128/1‑266 (MQ=255)
                                                                                                                                            gACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCCTCGCTGTCACCCACCGG‑TGCGTAGAGGCACCAACGCaccacccaa                                                                                                                                  >  2:1132797/1‑285 (MQ=255)
                                                                                                                                                tCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGaa                                                                                                                             <  1:1606458/289‑1 (MQ=255)
                                                                                                                                                        aCCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGa                                                                                                                     >  2:24489/1‑289 (MQ=255)
                                                                                                                                                                  aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  1:1418931/197‑1 (MQ=255)
                                                                                                                                                                  aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        >  2:1418931/1‑197 (MQ=255)
                                                                                                                                                                  aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATca                                                                                                                                       <  1:2155365/261‑1 (MQ=255)
                                                                                                                                                                  aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATca                                                                                                                                       >  2:2155365/1‑261 (MQ=255)
                                                                                                                                                                  aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCg                                                                                                            <  1:1022638/288‑1 (MQ=255)
                                                                                                                                                                  aCGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGACAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGATTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCACCGTCACCCACCGG‑TGCGTAGCGTACCAGACGCAACACCACACCGCAGATAGCGACTATACTCg                                                                                                            >  2:89469/1‑288 (MQ=255)
                                                                                                                                                                   cgcgCAGGGGGTGATGAAAAGAGAACCGGCCAGGTAAACCCCTACCGCTTCAAT‑CGCAGTCTGGCCGTTTGGCAGCGCAATCAGCGCTACCAGCAGATGGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTGGATCTTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGcc                                                                                                          <  2:68281/289‑1 (MQ=255)
                                                                                                                                                                      gcCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGTAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGt                                                                                                        <  1:2607539/288‑1 (MQ=255)
                                                                                                                                                                       ccGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        <  1:9180/192‑1 (MQ=255)
                                                                                                                                                                       ccGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        >  2:9180/1‑192 (MQ=255)
                                                                                                                                                                                     cAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCCCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGAAATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGCAGAGGAACAGACGCATCCCCACACGGAAGACAGCGACTTTGCTCGCCGTCGCCAGGactgttc                                                                                          >  2:840697/1‑281 (MQ=255)
                                                                                                                                                                                        aTAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTcacccac                                                                                                                                                                  >  1:832991/1‑213 (MQ=255)
                                                                                                                                                                                        aTAACCGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCACCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAAcc                                                                                     >  1:1388916/1‑289 (MQ=255)
                                                                                                                                                                                             cGGCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGgcgc                                                                                >  1:2133206/1‑289 (MQ=255)
                                                                                                                                                                                               gCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATcac                                                                                                                                      <  2:1574372/233‑1 (MQ=255)
                                                                                                                                                                                               gCCAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAg                                                                              >  1:132285/1‑289 (MQ=255)
                                                                                                                                                                                                ccAGGTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTg                                                                                                                                                                          >  1:1287460/1‑197 (MQ=255)
                                                                                                                                                                                                    gTAAACCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTa                                                                                                                                                        >  1:2519460/1‑210 (MQ=255)
                                                                                                                                                                                                      aaaCCCTTACCGCATCCATGGCGA‑TGTCGCCGGTTTGCAGCGCCATCAGCGATACGAGCAGATAGACGAGGTGAGAGACAGATGAGTAACCGGGCCGTCGTTTGTAATTGGTCTGGCTCGGCCCCATCAGGTTACCGAAGATTATGGAGGCGAAGGCGATAATCGTCAGCACCACGCGAAGCGCTTCGCTGTCACCCATCGG‑TGGGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAGGTGGAAGCCGGCGCAGgcgtgc                                                                        <  2:1354611/288‑1 (MQ=255)
                                                                                                                                                                                                      aaaCCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGgcgcgc                                                                        <  1:769267/288‑1 (MQ=255)
                                                                                                                                                                                                      aaaCCCCTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGcc                                                                       <  1:2694395/289‑1 (MQ=255)
                                                                                                                                                                                                      aaaCCCCTACCGCGTCCATAGACA‑TTTCGCAGGTTTGCAGCGAAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGAGAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGcc                                                                       <  2:1101782/289‑1 (MQ=255)
                                                                                                                                                                                                         ccccTACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCGGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTg                                                                    >  1:1812866/1‑289 (MQ=255)
                                                                                                                                                                                                             tACCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACg                                                                                                                                            <  1:341685/213‑1 (MQ=255)
                                                                                                                                                                                                              aCCGCTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        >  1:1102959/1‑153 (MQ=255)
                                                                                                                                                                                                                  cTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGgcgc                                                                          <  1:1433584/274‑1 (MQ=255)
                                                                                                                                                                                                                  cTTCCATCGACA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACg                                                             >  1:2419810/1‑287 (MQ=255)
                                                                                                                                                                                                                        tcgacA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGCGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACAGAAGATGATGGAGGCAAAGGCGATACTCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCCCCGG‑TGCGTAGAGGAACAGTCGAATCACCACACCGAACATAGCGATGTTGCTCGCCGTCGCAAGGAAAGCGGAAACCGGCGGCAGCGCGCCCTGGGATActgcacgcg                                                      >  2:1274608/5‑280 (MQ=255)
                                                                                                                                                                                                                             aagctcGGCGGTTTGAAGGGCAAGCAGCGCTAACAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGAGATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCca                                                  <  2:469054/285‑1 (MQ=255)
                                                                                                                                                                                                                                ctcGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGCATTTGCTCGCCGTCCCCAGGAAAGTGGAAACCGGCGCAGGCCCGCCCTGGTATACGTCTGCCGCCCACAgc                                              >  2:2023011/1‑288 (MQ=255)
                                                                                                                                                                                                                                  cGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGgcg                                                                                 >  1:223615/1‑252 (MQ=255)
                                                                                                                                                                                                                                             aGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATa                                                                                                                                                                                                        >  2:425526/1‑123 (MQ=255)
                                                                                                                                                                                                                                                 cAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGta                                                                 <  2:1042259/253‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAATCAGCGCGACCGGGAGAGAGCCGGGGTGGGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCagag                              <  2:1240040/288‑1 (MQ=255)
                                                                                                                                                                                                                                                   aTCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCagagaga                           <  2:2133206/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    tCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGcc                                                                                                          >  2:1612167/1‑209 (MQ=255)
                                                                                                                                                                                                                                                           tACCAGCAGATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAAc                                                                                      <  2:193172/222‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cagATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCg                                                                                                                               >  2:1336026/1‑175 (MQ=255)
                                                                                                                                                                                                                                                                  agATAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATAATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAgg                                              <  2:352345/255‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aTAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCGCGCCGTCGCCAGGAAAGTGGAAACCGGCGCCGGCGCGCCCTGGTATGCGTCTGGCGTCCACAGGTGGAACGGCACCAGAGAGAGGTTGAAGCCGAGGCca          >  1:565302/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     tAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCAGAGAGAGTTTGAAGCCGAGGcc           <  1:2067266/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCAGAGAGAGTTTGAAGCCGAGGc            <  1:1472584/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tAGCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCAGAGAGAGTTTGAAGCCGAGGCca          >  1:2346192/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       gCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCa                                                                                                                                                                                                                 <  2:2398595/88‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gCCGAGGTGAGAGATAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGgcg                                                                           <  2:22/221‑1 (MQ=255)
                                                                                                                                                                                                                                                                                agagaTAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGccc                                                                      <  2:641981/217‑1 (MQ=255)
                                                                                                                                                                                                                                                                                agagaTAGATGAGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGccc                                                                      >  1:641981/1‑217 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                  
TACCGATAAAGCCCAGCGTCATCGGGATACCGGCCAGAGACAGCATCATCACCGTCATCACTGCCGCGAGGATCGGACGATGCCAGAACAGACCGCGGTAAGAGAACAGGGAATCAGCATCCGGGCCACGATACGGGCTGGACATCAGGCTGACCACGCCGAACGCGCCGAGGCTGCTGAACAGATAACCGGCCAGGTAAACCCCTACCGCTTCCATGCTCA‑TCTCGCCGGTTTGCAGCGCAATCAGCGCTACCAGCAGATAGCCGAGGTGAGAGATAGAACTGTAACCGAGCAGACGTTTGATATTGGTCTGGCTCAGCGCCATCAGGTTACCGAAGATGATGGAGGCAAAGGCGATAATCGCCAGCACCACGCGAATCGCTTCGCTGTCACCCACCGG‑TGCGTAGAGGAACAGACGCATCACCACACCGAAGATAGCGATTTTGCTCGCCGTCGCCAGGAAAGTGGAAACCGGCGCAGGCGCGCCCTGGTATACGTCTGGCGTCCACAGGTGGAACGGCACCAGAGAGAGTTTGAAGCCGAGGCCAACAATCAT  >  CP042583/1961611‑1962166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A