Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,964,015 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,964,0150GC99.4% 721.8 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (155/149);  minor base A (1/1);  total (156/151)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,964,0160CG99.3% 717.0 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (156/147);  total (156/151)
Fisher's exact test for biased strand distribution p-value = 2.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,964,0170TA99.0% 727.6 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (156/148);  minor base G (0/3);  total (156/151)
Fisher's exact test for biased strand distribution p-value = 1.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 307 total aligned reads displayed.

ATTGTAGTGAACAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCAGCTACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGGCTCAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGACTATAACCGCCCTGCAACCACAGTTGCAGGCTCAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGAAGCCGCC  >  CP042583/1963736‑1964293
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
aTTGTAGTGAACAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGt                                                                                                                                                                                                                                                                               <  1:1710748/289‑1 (MQ=255)
 ttgcaaggAAAAAACACCAGAGCCAGGGTGGCAATCAACAACACCAGCGCACGTGCAGAGATGTAAATGAAGAAATGGGTTTCCGAAGTGATACGCGTTTTACCGTCAGAGGC‑TTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTGCCCATAAAAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TGGTAc                                                                                                                                                                                                                                                                             <  2:2451760/282‑1 (MQ=255)
  tGTAGTGAACAAATACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTAc                                                                                                                                                                                                                                                                             <  1:2337790/289‑1 (MQ=255)
         aaCAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAg                                                                                                                                                                                                                                                                       >  1:1453206/1‑288 (MQ=255)
         aaCAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGc                                                                                                                                                                                                                                                                      >  1:2465895/1‑289 (MQ=255)
         aaCAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGc                                                                                                                                                                                                                                                                      >  1:1155913/1‑289 (MQ=255)
         aaCAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGc                                                                                                                                                                                                                                                                      >  2:1358273/1‑289 (MQ=255)
            aaaaaCCAGCGCCAGGATGGCAATCGACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGGACCGCCAGcaca                                                                                                                                                                                                                                                                   <  1:2538983/289‑1 (MQ=255)
              aaaCCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACAcc                                                                                                                                                                                                                                                                 >  1:1580939/1‑289 (MQ=255)
                   aGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGACCACGCCGATAACGCCGCCAAGGATCCACATCAGGTTGAGGTGGAAGAAGCTCTGATATTTTTCGCCCTCTTTCCACGACCA‑TAGTACCGCCAGccccgcgggca                                                                                                                                                                                                                                                            >  2:2583911/1‑279 (MQ=255)
                                 attCAACATCACCAGGCCACTCGCCTGGGGGTAAATGAAGACCTTGGTTGCCGCCGTAATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACg                                                                                                                                                                                                                                              <  2:2522468/287‑1 (MQ=255)
                                            ccAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATcagcag                                                                                                                                                                                                                                   >  2:909678/1‑289 (MQ=255)
                                               ggCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCC‑‑‑AGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGa                                                                                                                                                                                                                                                               <  1:7005/255‑1 (MQ=255)
                                                 ccACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATcagcagcga                                                                                                                                                                                                                                <  1:1358273/287‑4 (MQ=255)
                                                    cTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACCGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACAAGCCGATAACCCCGCCCCGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCCCTTTCCACGAACA‑TAGTATCGCCAGCACCCCGAGCAGTCCCGCCAGACCGACACTcagcaccgcacgg                                                                                                                                                                                                                            >  2:229288/1‑280 (MQ=255)
                                                    cTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGCTCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGCGGTGGAAGAAGCCCTGATCTTTTTCGCTCGCTTTCCAAGAACC‑TAGAACCGCCAGCACACCGAGCAGACCGGAACGCCCGACCATcagcagcaccacc                                                                                                                                                                                                                            >  2:1433855/1‑281 (MQ=255)
                                                    cTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATcagcagcgacagc                                                                                                                                                                                                                            >  1:2251911/1‑281 (MQ=255)
                                                    cTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATcagcagcgacagc                                                                                                                                                                                                                            >  2:637866/1‑281 (MQ=255)
                                                    cTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGACAGCAAACCGAGCAGACCGGTCACACCGACAATccgcagcgacagc                                                                                                                                                                                                                            >  1:31574/1‑281 (MQ=255)
                                                     tCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGccc                                                                                                                                                                                                                          >  1:1383184/1‑289 (MQ=255)
                                                              tgtAAATTAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTACGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGc                                                                                                                                                                                                                 <  2:2501929/289‑1 (MQ=255)
                                                               gtAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGc                                                                                                                                                                                                                 <  2:190838/288‑1 (MQ=255)
                                                               agaacatcagaaCTTGGTTGCCGCCGTGAGAAGCGTTTTTCCGTCAGAGGGTTTATGACCCCACAGTGCGATCAGGAAGTACATCGGCAACAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGc                                                                                                                                                                                                                 <  2:1745776/280‑1 (MQ=255)
                                                                 acgagaagaaCATGGGTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTAGTCCCCCAAAGTGCGATACAGAGGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAACAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGCTCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGAGCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgag                                                                                                                                                                                                              <  2:890134/285‑1 (MQ=255)
                                                                 aaaTGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgag                                                                                                                                                                                                              <  1:238084/289‑1 (MQ=255)
                                                                  aaaggaaaaCTTGGTTTCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgaga                                                                                                                                                                                                             <  2:1568639/282‑1 (MQ=255)
                                                                       agaaCTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGcc                                                                                                                                                                                                                                                                         >  2:2071433/1‑224 (MQ=255)
                                                                       agaaCTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAAt                                                                                                                                                                                                        >  1:2133169/1‑289 (MQ=255)
                                                                       agaaCTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTCCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAAt                                                                                                                                                                                                        >  1:1131891/1‑289 (MQ=255)
                                                                            ttGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAgaga                                                                                                                                                                                                   <  1:1916071/289‑1 (MQ=255)
                                                                                        gTGATACTCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGAGAGATCAGGACGTACATCGGCACAAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAAcgcg                                                                                                                                                                                       <  1:1256764/289‑1 (MQ=255)
                                                                                                     tACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCAt                                                                                                                                                                          >  1:534722/1‑289 (MQ=255)
                                                                                                                    tATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACt                                                                                                                                                            >  1:827230/1‑288 (MQ=255)
                                                                                                                    tATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACt                                                                                                                                                            >  1:947342/1‑288 (MQ=255)
                                                                                                                     aTGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGc                                                                                                                                                          <  2:1694739/289‑1 (MQ=255)
                                                                                                                     aTGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGc                                                                                                                                                          <  1:2176265/289‑1 (MQ=255)
                                                                                                                       gCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCa                                                                                                                                                        <  1:1161393/289‑1 (MQ=255)
                                                                                                                       gCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCa                                                                                                                                                        <  2:723286/289‑1 (MQ=255)
                                                                                                                          cccACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCAAGTCGAATTCAGACTGCCACt                                                                                                                                                      >  1:659601/1‑288 (MQ=255)
                                                                                                                           ccACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGAc                                                                                                                                                             <  2:756686/280‑1 (MQ=255)
                                                                                                                           ccACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGAc                                                                                                                                                             >  1:396774/1‑280 (MQ=255)
                                                                                                                           ccACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGAc                                                                                                                                                             >  1:756686/1‑280 (MQ=255)
                                                                                                                            cacaGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCa                                                                                                                                                                                                                                                                        <  1:1856468/172‑1 (MQ=255)
                                                                                                                            cacaGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCa                                                                                                                                                                                                                                                >  1:1536278/1‑196 (MQ=255)
                                                                                                                            cacaGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCa                                                                                                                                                                                                                                                <  2:1536278/196‑1 (MQ=255)
                                                                                                                                 tGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGTAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgag                                                                                                                                                                                                              >  2:1965895/1‑225 (MQ=255)
                                                                                                                                 tGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGTAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgag                                                                                                                                                                                                              <  1:1965895/225‑1 (MQ=255)
                                                                                                                                   cGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTcc                                                                                                                                            >  2:693266/1‑289 (MQ=255)
                                                                                                                                        aGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCcggcgg                                                                                                                                       >  1:1555838/1‑289 (MQ=255)
                                                                                                                                               aCATCGGCACCAGCATCATTTCCCAGAAGAGGAAGATCAGGAAGATGTCAATGGCAAGGAACACACCGATAACGCCGCCCAGCATCCACATCAGGTTGAGGTGGCAGAAGCCCTGTTATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTAAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGt                                                                                                                                <  2:602559/289‑1 (MQ=255)
                                                                                                                                                 aTCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCCCTGGCAAGGAACACGCCGAGAACGCCGCCCAGGCTCCACATCAGGTTGAGTTGGAAGAAGCCCTGATATATTTCGATCTCTCTCCACGAACA‑TAGTAACGCCAGCACCCCCAGCGGACCGGTCAGCCCACCCCTCAGCAGCGACAACCCGTCCATTGCGGCTTGAATAAGTATACCAACACGCGGCATCCTCGTCATCTCGAATCCAGAGCGGCCTTGCGGGATCGCGGCGGAtgcggta                                                                                                                               >  2:2209908/1‑282 (MQ=255)
                                                                                                                                                  tCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGt                                                                                                                                <  2:831805/286‑1 (MQ=255)
                                                                                                                                                    ggCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCTATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCACTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCCGCACGACCATCAGCAGCGACAGCCCGTCAATGACGAGATGAATAGAGCTACCACAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAACTCCGGCGGATTGCGCCAgtg                                                                                                                           >  1:1188517/1‑287 (MQ=255)
                                                                                                                                                    ggCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgag                                                                                                                                                                                                              <  1:2555378/206‑1 (MQ=255)
                                                                                                                                                     gCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATcagcagcgac                                                                                                                                                                                                                               >  2:1165240/1‑184 (MQ=255)
                                                                                                                                                                         aagaagaagaaCAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACcaca                                                                                                      <  2:817800/289‑1 (MQ=255)
                                                                                                                                                                            aagaagaaCAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGCCAGTGAATAACCGCCCTGCAACCCCCGtt                                                                                                   >  2:2619458/1‑289 (MQ=255)
                                                                                                                                                                               aagaaCAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCa                                                                                                >  1:843294/1‑289 (MQ=255)
                                                                                                                                                                                   aCAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGccc                                                                                                                <  2:162919/269‑1 (MQ=255)
                                                                                                                                                                                   aCAGGAACAGGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAgcga                                                                                            <  2:218323/289‑4 (MQ=255)
                                                                                                                                                                                         aCATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAgcgc                                                                                      <  2:534722/289‑1 (MQ=255)
                                                                                                                                                                                          ccatacGATGGCAAGGAACAAGCCGATAACGCAGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTCTTCGGTCTCATGCCACGACCA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGcc                                                                                     <  2:2468088/284‑1 (MQ=255)
                                                                                                                                                                                                              cGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGAAAGCGCCAGCGTCAATACCATGGTGa                                                                  >  1:1813722/1‑288 (MQ=255)
                                                                                                                                                                                                                 cGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCgag                                                                                                                                                                                                              >  2:5744/1‑145 (MQ=255)
                                                                                                                                                                                                                    tAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGc                                                                                                                  >  1:985864/1‑234 (MQ=255)
                                                                                                                                                                                                                    tAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATGAgcgc                                                           >  1:583871/1‑289 (MQ=255)
                                                                                                                                                                                                                    tAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAgcgc                                                           >  1:2197255/1‑289 (MQ=255)
                                                                                                                                                                                                                    tAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAgcg                                                            <  1:2364921/288‑1 (MQ=255)
                                                                                                                                                                                                                    tAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGGCAATCCCATGGTGATCAgcg                                                            >  2:848896/1‑288 (MQ=255)
                                                                                                                                                                                                                           gccacgggtCCACATCAGGTTGAGGGTGAAGACGCCCTAATAGTTTTCGATCCCTTTCCACGAACG‑TAGTACGGCCAGCACACCGAGGAGACCGGTCAGGACGACCATCAGCAGCGGCAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCa                                                     <  2:1820378/280‑1 (MQ=255)
                                                                                                                                                                                                                           gccCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCa                                                     >  1:2058839/1‑288 (MQ=255)
                                                                                                                                                                                                                             cccgggtCCACAGCCTGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑GGGTACCGCCAGCACACCGAGCAGGCCGGTAAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCATGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCg                                                  <  2:2545083/283‑1 (MQ=255)
                                                                                                                                                                                                                                  aTCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGc                                              >  2:1047020/1‑288 (MQ=255)
                                                                                                                                                                                                                                     cacaTCAGGTTGAGGTGGAGGAAGCCCTGATATTGTTCGACCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCt                                          <  2:177068/289‑1 (MQ=255)
                                                                                                                                                                                                                                     acaaTCAGGGTGACGTAGAAGAACCCCTAATATTTTTACATCTCCTACC‑CCGACAGTAGCACCGCCAGCACCCCGAGCAGACCGGTAAGCACGACCATCAGCGGCGACAGCCCTTAAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCt                                          <  2:1813823/286‑1 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGTAATTCcggcg                                                                                                                                        <  1:1764033/194‑1 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCcgg                                                                                                                                          >  2:1602092/1‑192 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGt                                                                                <  2:422472/250‑1 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCtt                                         >  1:2474656/1‑289 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCtt                                         >  1:1809499/1‑289 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCACCCTGCAACCCCAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGACATCAGCGCGATCCAGCGTGCCACCt                                          >  1:1820378/1‑288 (MQ=255)
                                                                                                                                                                                                                                           aGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACCGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCTCGAACAAGCGTGGCACCTTGACg                                     >  2:474318/1‑288 (MQ=255)
                                                                                                                                                                                                                                           aGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGt                                                                                <  1:2617202/245‑1 (MQ=255)
                                                                                                                                                                                                                                           aGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCACGGTGATCAGCGCGATCCAGCGTCGCACCTTCACg                                     >  2:2407706/1‑288 (MQ=255)
                                                                                                                                                                                                                                             gTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGGGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAgcg                                                            <  2:2657684/263‑1 (MQ=255)
                                                                                                                                                                                                                                             gTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAgcg                                                            >  1:2657684/1‑263 (MQ=255)
                                                                                                                                                                                                                                             gTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCa                                  >  1:168055/1‑289 (MQ=255)
                                                                                                                                                                                                                                             gTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGGGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCTCCAGCGTCAATCCCATGGTGATCAGCCCGATCCAGCGTTGCACCTTCACCCCa                                  >  2:2737467/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     gcaagaagCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGTCCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGtt                           <  1:432881/286‑1 (MQ=255)
                                                                                                                                                                                                                                                        agaagCCCTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCgg                        <  1:1342708/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             cccTTATATTTTTCGATCGCTTTCCACGAACC‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGc                   <  2:115571/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             cccTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAAcgcg                                                                                                                                                                                       >  2:1099866/1‑124 (MQ=255)
                                                                                                                                                                                                                                                             cccTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAAcgcg                                                                                                                                                                                       <  1:1099866/124‑1 (MQ=255)
                                                                                                                                                                                                                                                             cccTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGcc                  >  1:161280/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              ccTGATATTTTTCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGt                                                                                >  1:905035/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                       tttCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCAGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGaa        >  2:2355193/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        ttCGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGaa        >  2:1869668/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          cGATCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGAAgcc     <  1:1047020/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTCTCTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGAAgccg    >  2:1337530/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             tctcTTTCCACGAACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGCGACAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGTGAATAACCGCCCTGCAACCACAGTTGCAGCGACAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGAAgccgcc  <  1:346802/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
ATTGTAGTGAACAAAAACCAGCGCCAGGATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCAGCTACA‑TAGTACCGCCAGCACACCGAGCAGACCGGTCAGCACGACCATCAGCAGGCTCAGCCCGTCAATGGCGAGATGAATAGAGATACCAAAACGCGGGATCCACGGCATGTCGAATTCAGACTGCCACTGCGGAATTCCGGCGGATTGCGTCAGACTATAACCGCCCTGCAACCACAGTTGCAGGCTCAGCGCCAGCGTCAATCCCATGGTGATCAGCGCGATCCAGCGTGGCACCTTGACGCCAAAGCGTTCGGTCTGCCAGCACAGGAAGCCGCC  >  CP042583/1963736‑1964293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A