Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
150 |
105.7 |
2655328 |
79.3% |
2105675 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,638,228 |
A→G |
17.5% |
E196G (GAG→GGG) |
pitA → |
phosphate transporter, low‑affinity; tellurite importer |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,638,228 | 0 | A | G | 17.5%
| 150.2
/ 4.4
| 86 | E196G (GAG→GGG) | pitA | phosphate transporter, low‑affinity; tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (34/31); new base G (9/9); total (44/42) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTCGAAGCTTACT > NC_000913/3637995‑3638461
|
aTCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCCGATCCACCTGACCCCAGCGGGGCGTg > 1:871468/1‑239 (MQ=255)
ctctCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGAC‑T‑GAATTTTTTGCTGCGTCGCTACTTGAGCGGGA‑CCAAGAAACGCGCCCGGATCCACCTGACCCCAGCGGGGCGTG‑Aaaaga > 1:750946/1‑239 (MQ=255)
aTACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGTTGGCGGTC‑T‑GATTTTTTTGCTCCGTCCCTACCGGGGGGGCA‑CCAAAAAAAGCCCCCGCTTCCCCCCCACCCCACGGGAGCGGG‑Caaaaaaaaag > 2:561066/1‑236 (MQ=255)
aCGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACgg < 1:433329/239‑1 (MQ=255)
aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATTCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑TATTTTTTTTCTCGTTCCCTCCCTGAGCGGCACCCGAGAAAC‑CACCCCTCTCCCCCCGCCCCCCACGGGGGGGGAAAAAAAAAGACGGCaaaa > 2:1027319/1‑237 (MQ=255)
aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTTCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTTGCCACCTTACCCCACCGGAGAGTG‑AAAAGAAAAACggacaaca > 1:1220327/1‑233 (MQ=255)
aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCACCGGAGCCGG‑Aaaaga > 1:236230/1‑226 (MQ=255)
aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTTACCCCAGCGGGGCGTG‑AAAAGAAAGACGGCAAGaa > 1:577351/1‑239 (MQ=255)
aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCCTCGCTACTGGAGCGGCA‑CCCAGAAACGCGCCCGTATCCACCTGGCCCCAGCAGACCGTG‑Aaaagaaatcaggccagaa > 1:153881/1‑228 (MQ=255)
tGGCGCGATCATGGGGATTGGTTTAACCAATGGGTTGATGACCGGGACGGCAGTGGTGGATGCAATCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGaaaa < 1:1151622/239‑1 (MQ=255)
gcgcGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTTGTGCGTCGCTACTGGAGCGGCA‑CCCAGAAACGCGCCAGTATCCACCCGTCCCCAGCGGAGCTGG‑CTAAGAAAGACGGGTAGaaaaa > 1:357580/1‑238 (MQ=255)
cgcgATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCC‑CCAAGAAAAGCGCCCGTATCCCCCGTACCCCACCGGAGCCGG‑AAAAGAAAAAAGGCAAGaaaaaa > 1:127752/1‑237 (MQ=255)
gATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GGTTTTCTTGCCGCTTTCCTCCTGGAGCGGGC‑CCAAGAAACCCGCCCCTATCCACCTGACCCCCGCGGGGGGGG‑AAAAAAAAAAACGCaaaaaaaacaccc > 2:877036/1‑234 (MQ=255)
tcatcGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTGCCTACTGGAGCGGCC‑CCAAGAAACGCGCCCCGATCCACCTGACCCCAGCGGAGCGGG‑AAAAGAAAGACGGCAAGAAAAAcccccc > 1:865673/1‑238 (MQ=255)
gggggttttttttAACCAAGTTGTTGATTCCCGGGCCCGTAGTGGTGGATGCACTCAATTCCCCGAAAGTTTTAGTTTTTTTGGGTTC‑T‑CTGATCGTTTCCCCTATTGCCGGCCTGGGTTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTc < 2:32574/229‑1 (MQ=255)
tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTT‑T‑GGTTTTTTTGCTTCGTCGCTAATGGGGCGGCA‑CCCAAACACGCGCCCGTATCCCCCCGCACCCAACGGAGGGTG‑AAAAGAAAAAGGGCAAGAAAAAGCCCCACGTCTGGGCCCGCGTTGCGCTGa > 2:1026336/1‑239 (MQ=255)
tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTTCTGCGTCGCTACTGGGACGGGC‑CCCAGGAACGCGCCCGTATCCACCTGACCCCCGCGGGGCGGG‑AAAAGAAAAACGGCGAAAAAAAAACCCCATCCTGGAcgcggcttcgggcga > 2:1056117/1‑228 (MQ=255)
tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGGG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTTCGCTg > 1:1309831/1‑238 (MQ=255)
tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGGCTT‑GTTTTTTTTCCTCGGTC‑CTCCCGGGGCGGGC‑CCAAGAAACGCGCCCCTGTCCCCCCTACCCCCGCGGGGCGGG‑AAAAGAAAAAACGCCAGGAAAAACCCCCGGCCTGGACGCGTATTgggcgct > 2:54221/1‑236 (MQ=255)
gatgaCCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCACGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAACAAAACGGCAAGAAAAAGCCGCCCTTCTGGACCCGCATTTCGCTGAACCtt > 1:705301/1‑238 (MQ=255)
gACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑TATTTTCTTGCCGCGTCGCTACTGGGGCGGCA‑CCAAGTAACGCGCCCGTATCCACCTGACCCCCCCGGGGCGGG‑CAAAGAAAAACGGCAGGAAAAAACCACCGTCCCGGGCGCGTAATACGCGGACCCTTTcccacacag > 2:472587/1‑232 (MQ=255)
tGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCg > 1:652527/1‑238 (MQ=255)
tGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCCTGACGCGTATTGCCGTGATCCTTTCCGCTATCGGCCGGGGGGTTTTc > 1:63646/1‑238 (MQ=255)
ctcattattaccccGAAAGTCTTATGTTTTTTAGTGTC‑T‑CTGGACCTTTCCCCTATGGACGGCTGGGAGTTTGCT‑GCGGTG‑TGGATGTGCTTGAGGAGTGGCTACGGGAGGGTCA‑CCAAGACACGCCCCCGTATCCCCCTGGCCCAAGGGGGGCGTG‑AAAAGAAAGCCGGCAAGAAAACGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCa < 2:13932/228‑1 (MQ=255)
ctcTCATTACCCCAAATGTTTTAAGTTTTTTGGGTTC‑T‑TCGTTCTTTTCCCTTTGTGTCGGCTGGGTTTTTGCTGGCGGTT‑T‑GATTTTCTTGCTGCGTCGCTACGGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGCCCCCAGCGGGGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCAc < 2:652527/237‑1 (MQ=255)
aCTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTTTTTCTGCGTCGCTACTGGAGCGGCC‑CCCAAAAACGCGCCCGTATCCACCTGACCCCCGCGGAGCGGG‑GAAAGAAAGACGGCCAGAAAAAACCCCCCTTCTGGCCGCGGCATGCGCTGATCCTTTCCCCTATCCG‑AGTGGGGgttttctccg > 2:1030623/1‑233 (MQ=255)
tCAATTCCCCGAAATTATTAAGTTTTTCCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGgc < 1:472587/239‑1 (MQ=255)
cccGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAACCCCCGTTCTGGACGCGGATTGCGCTGATCCTTTCCCCCATCGG‑CGTGGGGCTTTCCCGCCGCGCGCACg > 2:997232/1‑239 (MQ=255)
cccGAAAGTATTAAGTATTTGCGGTTC‑T‑TTGATCGTTCCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACg < 1:1030623/239‑1 (MQ=255)
ccagAAAGTTTTATGTTTTTTGGGGTCTT‑CTG‑TCTTTTCCCCTTTTTGCGGCCTGGTTGTTGCGTGGGGTC‑T‑TATTTTTCTCACGCGCCGCTACGGGAGCGGCC‑CCAAGAAACGCGCCCGTATCCACCTGGCCCCAGCGAGGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACg < 2:945472/236‑1 (MQ=25)
ccGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGa < 1:997232/239‑1 (MQ=255)
aagtattaagtattTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGGGTTTTTGCACGGGGCGCACgcgtg > 1:864261/1‑234 (MQ=255)
gtattaagtattTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCCACTGGGCCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCCGCGGCGCGTG‑CAAAGAAAAAAGGCACACAAAAACCGCCGGTCTGGACGCGGATTGCGCGGACCCTTTTCCCCATCGG‑CGCGGGGTGTTCGCAAGTCGCGCAcacaaggga > 2:717886/1‑231 (MQ=255)
attaagtattTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTTCTGCGTCGCTACTGGAGCGGCA‑ACCAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCCCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTTTCACGGCGCGCACGATGGGCAGa > 1:415820/1‑239 (MQ=255)
ttttTGGTTT‑TCCTGATCTTTTCCCTTATTGGCGGCCTGGGTGTTGCTGGCGGTC‑T‑TATTTTCTTGCTGCGTAGCTACTGGAGGGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGCGCGTG‑AAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAt < 1:744278/239‑1 (MQ=37)
tttCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑ACAAGAAAGACGGCCAGAAAAAGCCGCCGTTCCGGACGCCGATTGCGCTGATCCCTTCCGCTATCGG‑CGTGGCGGTTTTGCGCCGCCGGAACAATGGTAAGAAAGGGAT‑Tg > 2:394701/1‑239 (MQ=255)
tCGGTTC‑C‑CTGATCGTTCCCCCTATTGGCGGCCTGGGGTTTGCCGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACGGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGt < 1:54221/239‑1 (MQ=255)
tCGGTCC‑T‑CTTATCGTTTCCCCTATTGGCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGt < 1:831969/239‑1 (MQ=255)
tc‑t‑cTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGGGGTTTTTCCCGGGGCGGAACATGGGGAGAAAGGCAT‑TTGTCCGGt > 1:889604/1‑239 (MQ=255)
gttcttttCCCCTTTTGGCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGt < 1:492960/234‑1 (MQ=255)
tttCCCCTTTTGGCGGCCTGTGGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTGCTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTa < 1:1026336/239‑1 (MQ=255)
tCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑CAAAGAAAGAGCGCAAGAAAAAACCGCCGTTCTGGACCCGTATTGCGCTGATCCTTTCCGCTATAGG‑CGAGGCGTTTTCTCACCGCGCGCACGCGGGTCAAACAAGCATATGGGCGGGTTTTG‑TGGTatt > 2:53405/1‑239 (MQ=255)
gCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGGGTTTTCGCCCGGCGCGGACGATGGGCAGAAAGGCCT‑TGGTCTTGGTATTTTGGGattgttttggcgccc > 1:19328/1‑230 (MQ=255)
cTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGGATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGGTTTTGCACGGGGCGGAAGATGTTCCGAAAGGCCT‑TGGGCTGGGTTTGTTGGGATTGATTGGGGTCtcgc > 1:751095/1‑238 (MQ=255)
ggTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGGTTTTGGCCGGGGCGGACGTTGGGACGAAAAGCAT‑TTGGCTGGGTTTGTTGGTATTTTTTTgcgccgcgccg > 1:81114/1‑237 (MQ=255)
gtggTTGCGGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCcagc < 1:438751/239‑1 (MQ=255)
tgttgggggggggTT‑T‑GCTTTTCTTGCGGCGTCGCTCGGGGGGGGTCA‑CCAAGAAACGCGCCCGTATCCACTGGCCCCTGGCGGAGCGTG‑AAAAGAAAGAGGGGAAGAAAAGGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCcagc < 2:871468/227‑1 (MQ=37)
ggCGGTC‑T‑GATTTTCTTGCTGGGTCGCTACGGGAGCGGCA‑CCAAGAACCGCGCCAGTATCCCCCTGACCCCAGGGGAGCGTG‑AAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCg < 1:596091/238‑1 (MQ=255)
cGGTC‑T‑GATTTCTTTGCCGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCgtg < 1:479078/238‑1 (MQ=255)
ttttttttCTGGCTGGGTCGCTGCTGGGGGGGCA‑ACAAAAACCGCGCCCGTACCCACCGGCCCCCAGGGGGGCGTG‑AAAAGAAAGCCGGCAAAAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGa < 2:63646/234‑1 (MQ=37)
t‑GATTTTCTTGCTGGGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGCCCCCAGGGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAAc < 1:1023573/239‑1 (MQ=255)
aTTTTCTTGCTGCGTCGCTACGGGAGGGGCC‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACAt < 1:77115/239‑1 (MQ=255)
gggcccgtACTGGAGGGGAA‑CAAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACt < 1:668583/231‑1 (MQ=255)
cgccacggggacGGCA‑CCAAGAAACGGGCCCGGTGCCACCTGACCCCAGCGGAGCGTA‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCt < 1:394701/227‑1 (MQ=38)
ccgtcgtGGAACGCCA‑CCAAGAAACGCGCCCTTATCCACCGGACCCCAGGGGGGCGTG‑AAAAAAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGGCGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCt < 1:891560/232‑1 (MQ=38)
cGCTACTGGAGCGGCA‑CAAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCt < 1:122315/238‑1 (MQ=255)
gCTACTGGAGCGGCA‑CCAAGAACCGCGCCCGTACCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTa < 1:957169/238‑1 (MQ=255)
cgggAGCGCCA‑CAAAGAACCGCGCCCGTACCCACGTGACCCCAGGGGAGCGTG‑AAAAGAAAGACGGCAAAAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGaaa < 1:96416/237‑1 (MQ=255)
ggAGCGGCC‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGGGGAGCGTG‑AAAAGAAAGGCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATc < 1:948669/239‑1 (MQ=255)
ggAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGGTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TTGTCTGGGTTTGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGGACATGAATGCCCCCGGCCACGAAATc > 1:432223/1‑239 (MQ=255)
gcgCGGCA‑CCAAAAAGCCCGCCCGTACCCCCCTGCCCCCAGGGGGGTGTG‑AAAAAAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATc < 2:577351/236‑1 (MQ=38)
gCGGCA‑ACAAGACACGCGCCCGTATCCGCCTGCCCCGAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCac < 1:599084/238‑1 (MQ=255)
gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCgg‑cgtgg > 1:555519/1‑117 (MQ=255)
gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACg < 2:860094/138‑1 (MQ=255)
gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACg > 1:860094/1‑138 (MQ=255)
gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCa > 2:114603/1‑153 (MQ=255)
gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCa < 1:114603/153‑1 (MQ=255)
gCA‑CAAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCgg‑cgtgg < 2:555519/117‑1 (MQ=255)
aGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGACGCGGCCGCTGGGCAGAAAGGCAT‑TGTGTTGGTTATGTTGGTATTGAATTGCGTCGCGCAACCAGGGCTCAGGGGGAACAGGAATGCGACAGGCTAAAAAATCaaccggaccggg > 2:470920/1‑236 (MQ=255)
aaCGCCCCCGTACCCACCTGGCCCCAGCGGAGCGTG‑AAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGAt < 1:561066/239‑1 (MQ=255)
cgcgCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGGCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGCAATCACCCGTACCCCGGATg > 1:57521/1‑238 (MQ=255)
cgccccGTAACCCCCCGGCCCAAGCGGGCGGTG‑AAAAAAAATACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTACTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGcc < 1:470920/236‑1 (MQ=37)
gcCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTTTGTTGGGATTGATTGGCGTGCCGCCCGCAGGCTTCGTGGGGAACAGGAATGCCCCTGGCTCCGAAATCacccgaacccgggtagcaac > 2:1019769/1‑230 (MQ=38)
cccGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGGATTGATTGGCGTCGCGCCCGCAGGCTTCCGGGTGAACATGAATGCCCCTGGCTCAGAAATAACCCGAACCCGTGATGCCATc > 1:869550/1‑239 (MQ=38)
cccggACCCTAGGGGGGCGTG‑AAAAGAAAGCCGGAAAGAAAAGGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTc < 1:1039620/235‑1 (MQ=255)
aCCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCCCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGGATTGATTGGCGTCGCGCCAGCAAGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGGGATGCCCTC‑AACAACGTc > 1:339714/1‑239 (MQ=255)
aCCTGACCCCAGCGGAGCGTA‑AAAAAAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTc < 1:838459/239‑1 (MQ=255)
aCCGGACCCCAGCGGAGGGTA‑AAAAGAAAGGCGGAAAAAAAAAGCCGCCGTTCTGGGCGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTc < 1:1263489/239‑1 (MQ=255)
cTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGCTGGTCAGAAAGGCAT‑TGGGCTGGTTATGTTGGTATTGATTTGCGGCGCGCCCGCAGGCTTCCCGCGTAAAATGGATGCCACTGGTGCCCGAATAACCCATACCCGCTAAGCCCCc‑aacaaacacga > 2:128402/1‑233 (MQ=25)
cTGACCCAAGCGGAGCGTG‑AATAGATAGACGGCAAGAAAAACCCTCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATAGG‑CGTGGCGTTTTCGCCCGGCGCGAACGACGGTCAGAAAACCAT‑TTGTCCGGTTTTATTGGTATTTAATGACGTCTCGCCGCCAAGGTCCGCTGAGAAGACGAATTCCCCTGGCTGCCAAAACACCCGTGCCCGTGCTGCCACCAAACAACCTCg > 2:276314/1‑239 (MQ=255)
gccccGGGGGAGGGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGGATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTCGAAGc < 1:588428/238‑1 (MQ=255)
aCCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGTTGCCCTC‑AACAAAGTCGac > 1:1196300/1‑236 (MQ=255)
ccccGGCGGTCCGTG‑AAGAGAAGGCCGGCAAGAAAAGGCCGCCGTTCGGGACGCTTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTCGAAGc < 1:377017/238‑1 (MQ=255)
ccccAGGGGGGCGTA‑AAAAGAAAGGCGGCAAGAAAAAGCCGCCGTTCTGGACGGGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTCGAAGc < 1:1027319/238‑1 (MQ=255)
cAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGGATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATGACCCCTACCCGTGATGCCATC‑AACAACCTCGAAACtt > 1:1078507/1‑237 (MQ=255)
ggAGCGTG‑GAAAGAAAAGCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTGCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTCGAAGCTTACt < 1:100506/236‑1 (MQ=255)
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ATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTC‑T‑CTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTC‑T‑GATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTG‑AAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGG‑CGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAT‑TGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATC‑AACAACGTCGAAGCTTACT > NC_000913/3637995‑3638461
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
