Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
150 |
105.7 |
2655328 |
79.3% |
2105675 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,975,377 |
A→G |
22.9% |
S78G (AGC→GGC) |
wecE → |
TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,975,377 | 0 | A | G | 22.9%
| 149.7
/ 11.8
| 88 | S78G (AGC→GGC) | wecE | TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase |
| Reads supporting (aligned to +/- strand): ref base A (47/18); new base G (15/7); total (63/25) |
| Fisher's exact test for biased strand distribution p-value = 7.87e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGATCACATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGT > NC_000913/3975139‑3975615
|
tGATCACATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCACAGGGTTACT‑GACGCCGTCCTGCACCGCTTCCCTGGAGATGGCGGCGCTGCTGCTCGATATCCCGCCTGGGGCT‑GAAGTGGTACTGCCGa > 1:709436/1‑239 (MQ=255)
cacaTGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCCCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTa > 1:449341/1‑239 (MQ=255)
tGATTCCATTTAGCGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAc‑c < 1:296669/239‑1 (MQ=255)
tCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑AAGTTTTGGCAGCGCCAAAGGGTTACT‑GACGCCGTCCTGCACCCCTTCGCTGGAGATGGCGGCCCGGCTGCCCGGTATCCAGCCTGGCGAT‑GAAGGGATCATGCCAGGCTACAC‑CTT‑Tg > 1:1242497/1‑239 (MQ=255)
cATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGGTATCCAGCCTGGCGCT‑GAAGGTATCATGCCGGCCCACAC‑CTT‑TGt > 1:399692/1‑238 (MQ=255)
tttAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGGGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCCCGATATCCAGCCTGGCGGT‑GAAGTGATCATGCCGAGCTACAC‑Ctt‑ttttt > 1:96165/1‑234 (MQ=255)
ttAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGGGCA‑CAGTTTTGGCAGCCCCAAAGTGTTACT‑GACGCCGTCCTGGCCCGCTTCCCTGGAGCTGGCGGCGCTGCTGCTCGCTATCCACCCTGGCGAT‑TAAGTGATCATGCCGGGCTACAC‑CAT‑TGtctc > 2:857736/1‑238 (MQ=255)
cGCACCGCCGGTGGTGGGTACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGGGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGCGGTCGGGTCA‑ACGTTTTTGCAGCGCCAAAGTGTTACTCGAC‑CCGTTCTGCACCGCTCCCCCGGAGATTGCGCGTGTGCCGCCCGATCTCCACCCCGGCGTG‑GAAGTGACCAGACCGCGCTACCC‑CTT‑TGTCTCCGcc > 2:1009802/1‑238 (MQ=255)
cGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCCCGGTATCCAGCCTGGCGAT‑GAAAGGATCATGCCGAGCTACCC‑CTT‑TGTCTCCAcc > 1:147190/1‑238 (MQ=255)
cgccgGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCCAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGGGATGGCGGCGCTGCTGCTCCATATCCAGCCCGGCGAT‑GAAGGGGTCAGTGCGAGCTAAAC‑CCT‑TGCCCCCACCCCCAAt > 2:388591/1‑239 (MQ=255)
cgccgGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGGTATCCAGCCTGGGGAT‑GAAGTGATCATGCCGAGCTCCAC‑CTT‑TGTCTCCACCCCCaa > 1:1305233/1‑238 (MQ=255)
aaCCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTACAC‑CTT‑TGTCTCCACCGCCAAA‑GCCTTTGtgcttc > 1:202092/1‑237 (MQ=255)
aaCTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGGGCTACAC‑CTT‑TGt > 1:267709/1‑208 (MQ=255)
gACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTACAC‑CTT‑TTTCTCCACCGCCAAT‑GCCTTTTTGCTGCCGGGCGCaaa > 1:821137/1‑239 (MQ=255)
gCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGttt > 1:204494/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCCAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGGGCCGCTGCCCGATATCCCGCCTGGCGAT‑GCAGTGATCATGCCCGGGTACCC‑CCT‑TGTCTCCCCCGCCCAA‑GCCCTTGGGTTGCGTGGGCCAAAAACCGttttt > 2:702277/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGGGGTGGCGGCGCTGCGGCTCGGTTTCCAGCCCGGCGCT‑CAGCGGGTCATGCCGGCCTCCAC‑CCT‑TGTCTCCCCGCCCAAT‑GCCTTTTGGCTGCGTGGGGCaaaaacagatttg > 2:401957/1‑231 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGAAATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTACAC‑CTT‑TGTCTCCACCGCCCAT‑GCCTTTGTGCTCCCTGGCGCCAAAATCGttttt > 1:254898/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGGGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGttttt > 1:393534/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGGGTTACG‑GACGCCGTCCTGCCCCGCTTCGCTGGGGATGGCGGACCTGCTCGCCGCTATCCATCCTGCCGAT‑GAAGGGGTAATTGCGGTCTAACC‑CTT‑TGTACCCACCCCCCAA‑GCCTTTTTGGCGCGGGGCGCAAAAAAAGttttt > 2:996534/1‑239 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCCAAAATCGttttttt > 1:545796/1‑237 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGGGCG‑ACGTTTTGGCAGGGCCACAGTGTTACT‑GACGCCGTCCTCCACCGCTTTCCTGGGGATGGGGGCGCGCCTGCTCGGAATCCAGCCTGCCGAT‑GACGGTATCCAGCCGGGCACCCCACTT‑TGTC‑CCACCGCCAAC‑ACCCTTTTGCTACGGGGGGCAAAAAACCttttttt > 2:500571/1‑237 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGAGCC‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCCTCGCCGGAGATGGCGGCGCTGCTGCCCCATATCCAGCCTGGGGAT‑GAAGGGATCCTGCCGAGCCACCA‑CTT‑TGTCCCCCACGCCCCA‑CCCTTTTTGACGCGGGGGGCACAAAACtttttttg > 2:1143395/1‑237 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGAGCA‑ACGTTTTGGCAGACCCAAAGTGTTACT‑GCCGCCGTCCTGCACCCCTTCGCTGGAGGTGGCGGCGCTGCTGCTCGGTATCCAGCCTGGCGATGGAAGT‑ATCATGCCCGGCTACCC‑CCT‑TGTCTCCCCCGCCCATACCCTTTTTCTTGGGGGGCCCAAAAA‑CGTTTTtgt > 2:149980/1‑239 (MQ=255)
ggCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGGTATCCAGCCTGGCCGT‑GAAGTGACCATGCCGAGCTACAC‑CTT‑TGTCTCCACCCCCACT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTgg > 1:610600/1‑239 (MQ=255)
gCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GCAGGGATCATGCCGAGCTACAC‑CTT‑TGGCTCCACCGCCAAT‑GCCTTTGGGCTGCGTGGCGCAAAAATCGTTTTtgtg > 1:181655/1‑237 (MQ=255)
gCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGAGCA‑ACGTTTTGGCAACGCCAAAGTGGTACT‑GACGCCGTCCTGCCCCGCTTCGCTGGAGAAGGGGGCGCCGCCGCCCGATACCCAGCCAGGCTGT‑AAAGCAATCCTGCCGGGGTAAAC‑CTT‑TGTCTCCCCCGCCAAG‑TCCTTTTGGCCGTGTGGGGGCAAAATGCGTTTTGTGGa > 2:945360/1‑239 (MQ=255)
gattGGGTAGCGGCAACTTGTGGGGAGATGGGTGTTTTACCCGGCGCTGCCAGTAGTGGC‑GGGGCACACGTTTGGGCAGGGCCAAAGTGTTACG‑GCCCCCGGCCGGCACCGCGGCGGGGGAGATGGGGGCGCTGCTGCTCGATATCCGGCCTGGCGAT‑GAGGTGATCAGGCCGGGCTACCC‑CTT‑TGTCTCCGCCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGa < 2:96165/235‑1 (MQ=255)
ggTCGCGGCAAACGGGGGGGCGATGGGGGTTTTCCCGGTCGCTGCCAGCAGTGGCTGGAGCA‑ACTTTTTGGCAGCGCAAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGtt < 1:35831/237‑1 (MQ=255)
ggTAGGGGAAAACTGGGGGGCGATGGCGGTTTTACCCGGCGCTGCCAGCAGTGGATGGAGCA‑ACGTTTGGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGtt < 1:929249/237‑1 (MQ=255)
ggaaaaCGGTGTGGCGATGGCGGTTTCACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTGGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCgg < 1:1005807/235‑1 (MQ=255)
gCAACCTGTGGGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGa < 1:857736/238‑1 (MQ=255)
gtggtgggcgtGGGGGTTTTCCCCTGCGCTGCCAGGAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCAAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATACCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATg < 1:996534/229‑1 (MQ=255)
gtgtgGCGGTGGCGGTTTTCCCGGTCGCTGCCAGCAGTGGCTGGAGCA‑CCGTTTGGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCCCCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATg < 1:562742/238‑1 (MQ=255)
tGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCCCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTTTGGATGTTCGCCCGGCACCCATGAACactcacg > 1:486045/1‑233 (MQ=255)
gCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCCAGCTCCAC‑CCT‑TGTCTCCCACGCCAAT‑GCCTTTGTGCTGCCGGGCGCAAAAATCGTTTTTGTGGGTGTTCGCCCCGACACCATGacaaccgaag > 2:562742/1‑228 (MQ=255)
gCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGAACATGCCGAGCTTCCC‑CTT‑TTTCTCCCCCCCCAAT‑CCCCTTGGGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTGTCCCGGACCCCATAAAAAACGACGaa > 2:303172/1‑239 (MQ=255)
aGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGGTGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGCCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGACAAAATCGTTTTTTTGGATGTTCGCCGGGACCCCATGAACATCGACGAAACGCTGAATAGAGGGGCGATCACCGACAAAAcg > 2:1114290/1‑239 (MQ=255)
aGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCCCCGACAAAAc > 1:601454/1‑238 (MQ=255)
cGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGCTGTTCGCCCGGCCACCATGAACATCGACGAACCCCTGATTGAATCGGCGATCACCGCCaaaccccccgt > 1:330649/1‑231 (MQ=255)
cGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGCCACCATGAACATCGACGAAACGCTGATTGAAGTGGCGATCACAGACAAAACGCGCGt > 1:939846/1‑239 (MQ=255)
cGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGA‑‑GAAGTGATCATGCCGGGCTACAC‑CTT‑TGTCTCCACCGCCACT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAGCACCGACGAAACGCGGATTAAAGCGGGAACCACCGACaaaccaccactt > 2:33602/1‑230 (MQ=255)
cGTTTGGGAAGCGCCAAGGTTTTCCT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGAt < 2:117564/171‑1 (MQ=255)
ttgggCAGCGCAAAAGTGTTACT‑GGCCCCGTCCGGCCCCGCTTCGTTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTAt < 1:950802/236‑1 (MQ=255)
agcagCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGACCATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACCCGCGGTa > 1:769335/5‑238 (MQ=255)
gcgcCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCgg > 1:117564/1‑171 (MQ=255)
cgcCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTTCTGCGTGGCGCCAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGCCGAAACGCTGCTTGAAGCGGCAACCCCCGAACAAACGCGCGGTAACCTGCggg > 2:1317399/1‑239 (MQ=255)
cgcCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGCCACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGCGCCg > 1:312213/1‑238 (MQ=255)
gcCAAGGTGTTACG‑GACCCCGTCCGGCCCCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCGGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCgg < 1:1001019/238‑1 (MQ=255)
caaaggtgtTACG‑GGCGCCGCCCGGCCCCGTTTCGGTGGAGATGGCGGCGCTGCTGCTCGATACCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCCCCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTc < 1:702277/234‑1 (MQ=255)
ttACT‑GACGCCGGCCTGCACCGCTTCGCGGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑Acg < 1:771037/238‑1 (MQ=255)
aCT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACCCg‑g > 1:485097/1‑239 (MQ=255)
cggccTGCCCCGCTTGGCTGGAGATGGCGGCGCTGTTGCTCGGTATCCAGCCTGGCGAT‑GAAGTTATCATGCCGGGTTACCC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGc < 1:149980/235‑1 (MQ=255)
cGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGCCAAAACGCGCGTTATCGTGCCGGTCCCTT‑ACGCG‑GGTGTGGcc > 1:925648/1‑239 (MQ=255)
aCCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCTTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAAt > 1:156986/1‑239 (MQ=255)
cccgtgcgggggAGAGGGGGGCGCTGCTGCTCGATTCCCATCCGGGCGAT‑GAAGTGATCATGCCGGGCTACCC‑CTT‑TGGCCCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATg < 1:361855/229‑1 (MQ=255)
ccGGTTCGTTGGGAATGCGGGCGCTGCTGCTCGATCTCCGGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATg < 1:1317399/239‑1 (MQ=255)
ccGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCG‑GCGAAATg > 1:1134115/1‑239 (MQ=255)
gCTTCGGGGGAGAGGGGGGCGCTGGTGCCCGATTTCCAGCCGGGCGAT‑GAAGTGATCATGCCGGGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa < 1:585826/239‑1 (MQ=255)
ctttCGCTGGGGGTGGCGGCGCTGCCGCTCGAGATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa < 1:260482/237‑1 (MQ=255)
cTTCGCTGGAGATTGCGGCGCTGCAGCTCGATAACCCGCCTGGCGAT‑GAAGAGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGGGGCGCAAAACTCGTTTTTGCGGCTGTTCGCCCGGCCACCATGATCATCTCCGAAACCCTTATTGGCGCGGCGCACACCTGCAAAACACTCGTTAACATGCCTGTCCATT‑A‑GCGTGGCGGGGCCC‑ACGAAATGGaa > 2:934276/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGTCCCCATTACCATGGCCGAAACGCTGATTGAAGCGGGCTTCACCGACAAAAACCCGGTTATCGCGCCGGTCCCTTAACGCG‑GG‑GGGGCCT‑GGGCAATgggc > 2:246453/1‑237 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAACTGGa > 1:433845/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa > 1:837562/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa > 1:360295/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGGTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACACGCGCTATAGTGCCGGGCCATC‑ACCCG‑GGCGTGGCCG‑GCGaaaaaggc > 2:652348/1‑234 (MQ=255)
ttcgggggtgaTGGCGGCTTTGCTCTTCGTTACCCACCCGGCCGAG‑GAGTTGATCATGCCGGTCTACCC‑CTTGTGT‑TCCACCGTCAAT‑GCCTTTGGGGCGGGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGaca < 2:202092/230‑1 (MQ=255)
tgcGCTGGAGATGGCGGCGTTGCTGCCCGATATCCAGCTGGGCGAT‑GAAGTGATCATGCCGGGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGaca < 1:303172/237‑1 (MQ=255)
cgcTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCg > 1:1122715/1‑239 (MQ=255)
ctgctgctCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGAAACCATGACCACCGCCGAAACGCTGATTGAACCGGAGATCACCGACAAAAACACCGGAATCATGCCGGTTCACT‑TCCCC‑GCGGTGGCCG‑CGGAAAAGGAAACCACTGTGGGGTTGGCGaa > 2:892939/1‑239 (MQ=255)
ttatCCCGCGTGGGAAT‑GAAGTGATCATGCCGAGCTCCCC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAAt < 1:388591/238‑1 (MQ=255)
tatCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGCGGTTGGCGAAAAAGCAAAAtt > 1:756602/1‑239 (MQ=255)
aGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCaa < 2:76193/52‑1 (MQ=255)
aGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCaa > 1:76193/1‑52 (MQ=255)
gcgtGGGGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAAtttgtttg < 1:1143395/236‑1 (MQ=255)
ccTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGc > 1:111922/1‑188 (MQ=255)
ggCGCT‑GAAGGGATCATGCCGAGCTACAC‑CTT‑TGTCTCCCCCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCACGGACACCATGACCATCGCCGAAACGCTGATTGAAGCGGCGATACCCGACAAAACCCGCGTAATCTTGCCGGTCCATT‑ACCCG‑GGGGGGGCCT‑GAGACGGTGCAACCAATAGGGGCTTGGGGAAAACGTATAATTTTTTTggggg > 2:737344/1‑238 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATg > 1:1261802/1‑207 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGt > 1:1156322/1‑239 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGt > 1:39440/1‑239 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCACGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGCATAGGAGACCATTATGCCGTGGGCGACAAAGCA‑AAATTGTTTTTgggg > 2:309781/1‑237 (MQ=255)
ggCGAT‑GAAGTGATAATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGAGGATGTTCGCCCGGACACCATGAACATCAACGAAACGATGATTGAAGCGGCGATCACCGACAAAACGCGCGGTATAGGGCCGGTCAATT‑AGGAG‑GTGGTGGCATGGCAACAGGCACACC‑TTTTGGGCTTGGGGGAAACGCAAAATTTGTTTGTggg > 2:659407/1‑238 (MQ=255)
aaGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATAGTGCCGGTCCATT‑AAGCG‑GGTGGGGCCT‑GCGAAAGGGGACCAATTATGGCGTTGGCGAAAAAAGATAATTTTTTTGTggggaaagag > 2:374562/1‑231 (MQ=255)
aaGTGATCATGACGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCACGGACACCATGAACATCCACGAAACGATGATTGAAGGGGCGATCACCATCAAAACGCGAGATATCGAGCAGTTCAATT‑AAGCG‑GGGGGGGCCT‑GAGAAATGGACAGCATAATGGCAGAGGAGTAAAAGCAAAAAATGTTTATGGAaaaaggg > 2:543360/1‑237 (MQ=255)
caggCCGGGCTACCC‑ATT‑TGTCTCCACCGCCAAT‑GCCGTTGTTCTGGCTGGCGCAAAAATCGTTTTTGTTGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGGGATCCCCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTc < 1:394533/236‑1 (MQ=255)
tGCCGAGCTACCC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAg < 1:246453/239‑1 (MQ=255)
gCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGCCACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGCCAAAACGCGCGTTATCGTGCCGGTCCATT‑AGGCG‑GGGGTGGCCT‑GCGAAATGGCACCCATTATGGCGTTGGGGAAAAAGAATAATTTTTTTGTGGTAGAAAAAGcccgccagg > 2:439752/1‑232 (MQ=255)
gAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTTTGGTAGAAGATGCCGCCAAGGGCg > 1:11428/1‑239 (MQ=255)
gAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCg > 1:85102/1‑239 (MQ=255)
aGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCCTT‑ACTCG‑GGGGTGGCCT‑GCGAAATGGACACCGTTATGGCGTTGGCGGAAAACCATAATTTGTTTTGGGTAAAAAATGCCGcccgaggggg > 2:1281526/1‑230 (MQ=255)
aGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTTTGGTAGAAGATGCCGCTCAGGGCgg > 1:536002/1‑238 (MQ=255)
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TGATCACATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGT > NC_000913/3975139‑3975615
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
