Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I0 R1 63 124.6 2504412 97.6% 2444306 226.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 954,374 C→G 13.5% P31P (CCG→CCC)  focA ← formate channel

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913954,3740CG13.5% 173.9 / 4.2 83P31P (CCG→CCC) focAformate channel
Reads supporting (aligned to +/- strand):  ref base C (30/41);  new base G (3/9);  total (33/50)
Fisher's exact test for biased strand distribution p-value = 3.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGT  >  NC_000913/954145‑954595
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                              
cccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAATCTTAAACGGATGtt                                                                                                                                                                                                                         >  2:1056454/1‑237 (MQ=255)
 gcAGGTGGTGCGCCCAGTCGCCTTAGCAACAAAAATCAACACGATGGAAGTAAAGAGATCGGGTCCGCAAACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  2:1129744/238‑1 (MQ=255)
 ccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  2:114459/239‑1 (MQ=255)
 ccAGGGGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTATTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACGCCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  2:468689/239‑1 (MQ=255)
      tGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGtt                                                                                                                                                                                                                    <  1:766840/236‑1 (MQ=255)
       gATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTTCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGGTGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTCCGTTGCt                                                                                                                                                                                                                 <  2:542730/238‑1 (MQ=255)
       gATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCt                                                                                                                                                                                                                 <  1:996784/238‑1 (MQ=255)
       gATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCt                                                                                                                                                                                                                 <  2:212036/238‑1 (MQ=255)
          gcgcCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAAACGCCCGATAGAAAGACTTCAGCGGCTGTTTCGTTGGTTtat                                                                                                                                                                                                             >  2:276214/1‑239 (MQ=255)
          gcgcCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAAACGCCAGATAGAAAGGCCTAAGCGGATGTTTCGTTGCTTtat                                                                                                                                                                                                             >  2:416488/1‑239 (MQ=255)
            cccccCTCGCCGTAGCAACAACAATCAACACGGGGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAg                                                                                                                                                                                                           <  2:103722/238‑1 (MQ=255)
                              caacaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGGTGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGcc                                                                                                                                                                                         >  1:657918/1‑239 (MQ=255)
                                acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGGGGGTGTTTTGTTGGTTTATAGACACCCGCCTCTTCGGCCa                                                                                                                                                                                        >  2:244282/1‑238 (MQ=255)
                                      aaCACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAAGATTAAGGGGGTGTTTTGGTGCTTTATAGAAACCCGCCTCCTCGGCCACTTTgg                                                                                                                                                                                  >  2:467166/1‑238 (MQ=255)
                                        cacGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCCGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCa                                                                                                                                                                               >  1:706669/1‑239 (MQ=255)
                                         acGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAACGGGTGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCAt                                                                                                                                                                              >  2:425826/1‑239 (MQ=255)
                                            gTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGGTGGTTTGTTGCTTTATAGACACCCGCCTCTTCGGCCAATTTTGCCATTgc                                                                                                                                                                           >  2:569663/1‑239 (MQ=255)
                                                  aaaaaGAGATCGGCTCCGCAGACAACAAAAAGAATCAGCCCCAGAGAGAAGAAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGAT‑TTGTGCCGGGGCCAGTGTTTGCTGTGATATAGAAGACGAATGCGATTGAGATAAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATTTTTCTTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAgg                                                                                                                                                                     <  1:425826/237‑1 (MQ=255)
                                                     aaGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAg                                                                                                                                                                  >  1:1162936/1‑239 (MQ=255)
                                                         gacgggCCCCGAAGAAAACAAAAAGACTCAGCCCAAGAGAGAAGAAACGGCAGC‑CAACCAGTTTTGCCAGGCAGAGGGGCA‑TTGTGCGGGGGCAAGGGGTTGCTGAAATATAGAAGACAAATGAAATTGAGAAGAAAACCCCGGCGGTAAGCGCAAGATAGAAAGTCTAAAGGGGATGTTTCGTTGCTTTAAAGAAACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaa                                                                                                                                                               <  2:166593/234‑1 (MQ=255)
                                                           ccgcccccGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGAAAACGCCGC‑CAACCATTTTTCCAATGCAGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATAAAAACCCCGGCGTTAATCGCCAGATAAAAATTCTTAAGCGAATGTTTCGTTGTTTTATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                             <  2:657918/232‑1 (MQ=255)
                                                             ggCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTATTAAGCGGGTGGTTCGTTGCTTTATAGAACCCCGCCTCTTCGGCCACTTTTGGCATTGTAGCCGGAAGTaaaaag                                                                                                                                                           >  2:833700/1‑236 (MQ=255)
                                                                 ccGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCcaa                                                                                                                                                      >  1:560545/1‑239 (MQ=255)
                                                                         aacaCAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTg                                                                                                                                               >  1:16620/1‑238 (MQ=255)
                                                                         aacaCAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGGTTCGTTGCTTTTTAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAAGTCAAAAGGGGTg                                                                                                                                               >  1:225369/1‑238 (MQ=255)
                                                                            acaAAGATTCACCCCCAGAGAGAAGAAAATGCCGC‑CAACCATTTTTCCAAGGCGGAGGGGCA‑TTGTGCTTGTGCCAGTGGTTGCTGTGATATAGAAGACAAAGGCGATTGAGATAAAACCCCCGGCGTTAACCGCCAGAAAGAAAGTCTTAAGCGGATTTTTCGTTTCTTTAAAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAg                                                                                                                                           <  2:279885/239‑1 (MQ=255)
                                                                                     cAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTcac                                                                                                                                   >  1:114816/1‑237 (MQ=255)
                                                                                         ccaagagagAAGCAAATGCCTA‑AAACCAGTTTAGCCATGCCGAAGGTCG‑TTGTCCCTGCGCCGGTGTTTGCTGTAATAAAGAAGACGAATGCGATTGAGATGAAAACCCCGGCGTTAATCGCCAGATAGAATGTCTTAAGCGTATGTTGGTTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACt                                                                                                                                <  2:454097/233‑1 (MQ=255)
                                                                                          cgaaggagaAACAAA‑GCCGCACACCCGGTTTGGCCATGCCGAAGGGGT‑TTGTCCTGGGGCCAGTGGTTGGTGTAATAAAGAAGACGAATGCGAGTGAGATGAAAACACGGGCTGAAAACGCCAGATAGAAAGTCTAAAGCGGTTGTTTCGTTGCTTTATACACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAAct                                                                                                                            <  2:467174/234‑1 (MQ=255)
                                                                                            agagagAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGACGACGAATGCGATTGAGATGAAAACACCCGCGGTAATTGCCAGATAAAAAGCCTTAAGCGGATGTTTCGTGGCTTTATAGAAACCCGCCTCTTCGGCCAATTTGGGCATTTCTTCAGTATGTAAAAGAAAAAACGGGGTGTACGC‑TTTCAtaataatcat                                                                                                                          >  2:177310/1‑235 (MQ=255)
                                                                                               gagaAGCAAATGCCGC‑CAACCAGTTTTGCCAGGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTAATAAAGAAGACGAATGCGATTGAGATGAAAACCCCGGGGGAAACCGCCAGATAAAAAGTTTAAAGCGGATGTTTCTTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAActctc                                                                                                                         <  1:601572/237‑1 (MQ=255)
                                                                                                  aaGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGGCAGATAGAAAGTCTTAAGGGGATGGTTCGTTGCTTTATAGACACCCGCCCCTTCGGCCACCTTTGCCATTGCAGCAGGAAGGAAAAGAACAAAAGGGTTGGCAACTTTTCAC‑CTAACTCCTTCttt                                                                                                                    >  2:881749/1‑239 (MQ=255)
                                                                                                  aaGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTTGc                                                                                                                                                                                 >  1:454708/1‑179 (MQ=255)
                                                                                                     cAAAGGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACCCCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGTTGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTttatt                                                                                                                 <  1:416488/239‑1 (MQ=255)
                                                                                                                 acccAGTTTTGCCATGCCGAGGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATGGAGATAAAAACCCCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                      <  1:974578/237‑1 (MQ=255)
                                                                                                                 acccAGTTTTCCAAGGCGGAGGGGCA‑TGGTGCCTGTGCCAGTGGTGGTTGTGATATAGAAGACGAATGCGATGGAGATAAAACCCCGGGCGTAAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGTTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                      <  2:1080748/237‑1 (MQ=255)
                                                                                                                 aaCCAGTTGTGCCACGCCAAAGGGCG‑TGGTGCTTGTGCCGGTGGTTGTTGTTATATAGAAGACGAATGCGATTGATATAAAAACCCCGCCGTTAATCGCCAGATAGAAATTCTTAAGCGGTTGTTTCTTTGCTTTAAACACTCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                      <  2:1251495/239‑1 (MQ=255)
                                                                                                                    cAGTTTTGCCATGCCGAAGGGTT‑TTGTGCCTGTGCCAGGGTTTGCTGTAATATAGAAGACGAATGCGATTGAGATGAAAACCCCGGCGGTAATCGCAAGATAAAAAGTTTTAAGCGGATGTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTgcagca                                                                                                                                                                       <  1:1126382/172‑1 (MQ=255)
                                                                                                                     aGTTTTGCCAGGCCGAAGGGCT‑TTGTGCCTGTGCCAGTGGTTGCTGGGATAAAGAAGCCAAATGCTATTGAGATAAAAACCCGGGGGGTAACCGCCAGATAGAAATTCTTAGGCGGATGTTTCGTTGTTTTATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAActctct                                                                                                                        <  2:497992/217‑1 (MQ=255)
                                                                                                                        ttttCCATGGCGAAGGGGATTTGTGCTTGTGCCAGTGGTTGTGGTGATAAAGAAGACGAAGGCGATGGAGATAAAAACCCCGGCGGTAATCGCCAGATAAAAAGTTTAAAGGGTTTTTTTCTTGTTTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGAt                                                                                                 <  2:626242/238‑1 (MQ=255)
                                                                                                                             cATGCCGAGGGGCA‑TGGTGCCTGTGCCGGTGGTTGCTGTGATATAGAAGAAGAATGCGATTGAGATGAAAACACCGGCGTTAATCGCAAGATAGAAAGTCTAAAGCGGATGTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                          <  1:213695/239‑1 (MQ=255)
                                                                                                                             aaggCCGAAGGGCA‑TTGTGCCTGTGCAAGTGGTTGCTGTGAAATAGAAGACGAATGCGATGGAGAGAAAACCCCCGGCGGTAATCGCCAGATAGAAAGTCTTAAGGGGATGTTTCGTTGTTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                          <  1:244282/236‑1 (MQ=255)
                                                                                                                              aTGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGGCATTTCAGCAGGAAGTaaaa                                                                                                                                                             >  2:1126382/1‑172 (MQ=255)
                                                                                                                              aTGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTGGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACCCCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACaa                                                                                         <  1:68741/239‑1 (MQ=255)
                                                                                                                               tGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAg                                                                                                              >  1:497992/1‑217 (MQ=255)
                                                                                                                                 ccGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg                                                                                       >  1:626242/1‑238 (MQ=255)
                                                                                                                                          a‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACAACCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAAATCTCTCTttat                                                                                                                  >  1:1019546/1‑202 (MQ=255)
                                                                                                                                            ttGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                      >  2:352201/1‑213 (MQ=255)
                                                                                                                                            ttGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                      <  1:352201/213‑1 (MQ=255)
                                                                                                                                             tgtgcctgggccGGGGGTTGGTGTGAAAAAGAAGGCGAAGGCATTGGTGAAGAAAACACCGGCGTTAATCGCCAAAAAGAAAGTCTTAAGCGGATTTTTCGTTCTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATga                                                                           <  2:225369/239‑1 (MQ=255)
                                                                                                                                                  ctgtgccAGTGTTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGTTAATCCCCAGATAGAAATTCTTAAGCGGATTTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAAt                                                                      <  1:569663/239‑1 (MQ=255)
                                                                                                                                                  ctggacgaGTGGTGGTTGTGATATAGAATAAGAATGATATTGAGATAAAAACACCGGGAGTAATCCCAAAATAGAAGGTCTAAAGCGGATGTTTCGTTCCTTTAGAGACCACCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                       <  2:911772/231‑1 (MQ=255)
                                                                                                                                                  cggtgcaAGTGGTTCCTGTGATATAGAACACAAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGTTGTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                       <  1:276214/236‑1 (MQ=255)
                                                                                                                                                  cggggccAGGGGTTGCTGTGATATAAAAGAAGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAAATAGAAAGTCTTAGGCGGATGTTTCGTTGCTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                       <  1:963598/234‑1 (MQ=255)
                                                                                                                                                     tgccAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                             >  1:714935/1‑150 (MQ=255)
                                                                                                                                                     tgccAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGa                                                                   >  1:601186/1‑239 (MQ=255)
                                                                                                                                                       cgaGTGGTTGCTGTGATATAAAAGCCGAATGGAATGGAGATAAACACACCGGGGGTAAGCGCAATAGAAAACTTCTAACGCGGATATTCCGTGCCTTGATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  2:576561/237‑1 (MQ=255)
                                                                                                                                                        gaGTGGTTGGTGTGATAAAAAAAACAAGTGAGATGGATATGAACACCCGGGGGGTAATCGCCAGATAAAAAGTCTTAGGGGGAGGTTTGTTTGTTTAATACACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGatat                                                                <  2:114816/238‑1 (MQ=255)
                                                                                                                                                        cagggtttGCTGTTAAAAAGAAGACGAATGCTTTTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGTATGTTTCGTTGCTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  2:615519/232‑1 (MQ=255)
                                                                                                                                                        cAGTGGTTGTTGTGAAAAAGAAGACGAATGCGATGGAAATGAAACCCCCGGCGGTATTCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  1:1056454/238‑1 (MQ=255)
                                                                                                                                                        cAGTGGTTGCTGTGAAATAGAAGAAGAGTGCGATTGAGATAAAAACACCGGCGTTAATCGCAAGATAGAAAGTCTTAAGGGGATGTTTCGTTGTTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCGGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  2:16620/238‑1 (MQ=255)
                                                                                                                                                        cAGGGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGACAGATAGAAAGTCTTAAGCGGATGTTTCGTTTCTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  1:881749/238‑1 (MQ=255)
                                                                                                                                                                gCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAATCGGATGTTTTGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCCTTATAGATGAGAAATTGATATAGATCata                                                        >  1:892072/1‑239 (MQ=255)
                                                                                                                                                                    tgATATAGAAGACGAATGCGATTGAGATAAAAACACCGGCGGTAATCGACAGATAAAAAGTCTTAAGCGGTTGTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  2:732223/226‑1 (MQ=255)
                                                                                                                                                                      atatAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAAATGAGAAATTGATATAGATCATAtttct                                                   >  2:537871/1‑237 (MQ=255)
                                                                                                                                                                      atatAGAAGACAAATGCGATTGAGATAAAAACACCGGCGTAAATCGCAAGATAGAAAGTCTTAGGGGGTTTTTTCGTTCCTTTAAAAACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGc                                                  <  2:710202/239‑1 (MQ=255)
                                                                                                                                                                       tataGAGAACGAATGCAATTGGGAGGAAAACACGGGCGGTAACCACCAAATAGAAAGCCGAAGGCGGATGTTACGTTGCTTTAGAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTATTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                 <  1:823906/239‑1 (MQ=255)
                                                                                                                                                                       tataAAAGACGAATGGGATTGAGATGAAAACCCCGGCGTTAATCGCCAAATAGAAAGTCTTAAGCGGTTTTTTCTTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                 <  1:467166/239‑1 (MQ=255)
                                                                                                                                                                        agagaagaCAAATGCTAGTGAAATGAAACCACCGGTGGTAAGCGCAAGATAAAAAGTCTAAGGCGGATGTTTCGTTGCTTTATAGAACCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCt                                                <  2:560545/237‑1 (MQ=255)
                                                                                                                                                                         tgaaagaCGAATGGGATGAAAGTAAAAACCCGGGCGTTAATCGCAAGATAGAAGGTCTTAGGGGGAGTTTTGTTTTCTTGATAAAACCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTg                                               <  1:102530/236‑1 (MQ=255)
                                                                                                                                                                         taGAAGACGAAGGCGATGGAGAGAAAAACACCGGCGATAACCGCAAGATAGAAAGTCTTAAGCGGATGTTGCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTg                                               <  1:537871/239‑1 (MQ=255)
                                                                                                                                                                              gaCGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCatat                                                       >  1:732223/1‑226 (MQ=255)
                                                                                                                                                                                cGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTtata                                        >  1:710202/1‑239 (MQ=255)
                                                                                                                                                                                  aaTGCTATGAAGATAAAACCCCCGGCGTAAATCGCAAGATAGAAAGTATTAAGCGGTTGTTTCGTTGCTTTATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAg                                       <  2:601186/238‑1 (MQ=255)
                                                                                                                                                                                              aTGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGc                          >  2:292894/1‑239 (MQ=255)
                                                                                                                                                                                               taaaacggccGGGGATAGTCGCAAGATAAAATGTCTTAGGGGGGTGTTTGGTTGTTTAAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTAGAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCa                         <  2:676956/231‑1 (MQ=255)
                                                                                                                                                                                                      acCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTTTAGGCCCGTCACTCGCCTGGtttt                  >  2:574068/1‑239 (MQ=255)
                                                                                                                                                                                                        cggcggTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACt                                                                                                                                >  2:1128463/1‑127 (MQ=255)
                                                                                                                                                                                                        cggcggTAATCGCCAGATAAAAAGTCTTAAGGGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACt                                                                                                                                <  1:1128463/127‑1 (MQ=255)
                                                                                                                                                                                                           cggTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGa                                                             >  1:837431/1‑191 (MQ=255)
                                                                                                                                                                                                                      aaaTAGAAGGTCTGAAGCGTTTTTTTCTTTGCTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt  <  1:833700/237‑1 (MQ=255)
                                                                                                                                                                                                                         tAGAATGTCTTATGCAGATTTTTCGTTGCTTTAAGGACCCCCGCCTCTTCGGCCTCTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACACTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt  <  2:568293/236‑1 (MQ=255)
                                                                                                                                                                                                                         tAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt  <  1:574068/236‑1 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                              
CCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGC‑CAACCAGTTTTGCCATGCCGAAGGGCA‑TTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAGATGAAAACACCGGCGGTAATCGCCAGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGC‑TTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGT  >  NC_000913/954145‑954595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A