Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I0 R1
|
87 |
172.1 |
3477528 |
97.2% |
3380157 |
226.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
599,579 |
T→G |
24.4% |
V289G (GTG→GGG) |
cusA → |
copper/silver efflux system, membrane component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 599,579 | 0 | T | G | 24.4%
| 250.5
/ 11.8
| 113 | V289G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (10/69); new base G (32/2); total (42/71) |
| Fisher's exact test for biased strand distribution p-value = 4.37e-17 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 116 total aligned reads displayed.
TGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGT > NC_000913/599342‑599807
|
tGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGgtggtg < 1:786954/239‑1 (MQ=255)
tCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCg < 2:143904/239‑1 (MQ=255)
aaaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑t < 1:735787/239‑1 (MQ=255)
aaaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑t < 1:875558/239‑1 (MQ=255)
gggcggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCaaaaa < 1:1188558/237‑1 (MQ=255)
gggcggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCaaaaa < 1:1407016/237‑1 (MQ=255)
ggcggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACg < 2:1572952/238‑1 (MQ=255)
ccTGGAGGAAGCGGAATATAGGGTGCGCGCCAGCGGCTAGCTGCAAACGGTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATcgccg < 2:1328479/238‑1 (MQ=255)
aCTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGTGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATcgccg < 1:1578768/239‑1 (MQ=255)
ggaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTg < 2:1677846/238‑1 (MQ=255)
ggaaTATATGGGGCGCGCAAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAAGGGGGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑c < 2:1046547/238‑1 (MQ=255)
tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATcgccg < 1:1728691/223‑1 (MQ=255)
tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑Caa < 1:1218616/236‑1 (MQ=255)
tGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGTCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGaa < 1:873753/239‑1 (MQ=255)
ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGaaa < 1:141735/239‑1 (MQ=255)
ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGGTCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGG‑GAAACTGGaaa > 1:1424549/1‑239 (MQ=255)
gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGaaa < 1:811005/238‑1 (MQ=255)
gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACCGCGAAGGCGAAGTGGCGCGGGGGGGGCGTG‑TCCCGCGACTCC‑CGCAAAAAC‑CCCGCGACAGGGGACCCCG‑CC‑GTGCA‑GGA‑CAAAcccgaac > 2:873753/1‑233 (MQ=255)
tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGAGCCTGCGG‑TCC‑GGCAAAAACGCCCCACG‑AGGGATCGCCC‑GC‑GAGAC‑GGA‑CAAACTGGAAACg > 1:1076964/1‑239 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTTATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTTCCGCGA‑TCC‑CGCCAAAAAACCCGGGG‑AGGAGGTGCCC‑GC‑GTGAA‑GGG‑CAAACAGGGAACg > 2:732149/1‑238 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGATCCTGCGA‑TCC‑GGCAAAAACGCCCGCGA‑AGTGATCGCCG‑CC‑GTGGA‑GGG‑CAAACTGGGAACg > 1:31164/1‑238 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGG‑AGTGATCGCCG‑CC‑GCGAA‑GGC‑CAAAATGGAAAc > 1:206837/1‑237 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑TTC‑GGCCAAAAACCCCGCGA‑AGGGGACGCCG‑CC‑GGGGA‑GGG‑CAAACTGGAAAc > 1:1062310/1‑237 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCC‑GGCAAAAACGCCCGAGG‑AGGGATCGCCG‑CC‑GGGGA‑GGA‑AAAACCGGAGACg > 1:461873/1‑238 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGG‑TCC‑GGCGAAAACACCCGGGA‑AGGGGTCGCCG‑CC‑GTGGC‑GGA‑GAAACCGGaaga > 2:233284/1‑235 (MQ=255)
gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GCGAA‑GGG‑GAAACTGGAAACg > 1:683163/1‑238 (MQ=255)
cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGTTCCTGCGG‑TCC‑GGCGAAAACGCCCGCGA‑AGAGGTAGCCG‑CC‑CGGGA‑AGA‑CAAAATGGGAAc > 1:941944/1‑236 (MQ=255)
cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCC‑GGCAAAAACCCCCGGGG‑AGGGATCGCCG‑CC‑GGGGA‑GGG‑CAAACTGGGAACGcc > 2:695131/1‑238 (MQ=255)
cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTACTGCGG‑TTC‑GGCAAAAACGCCCGAGAGAGGGAT‑GCCG‑CCGGTGAG‑GGC‑Caaatgggcaagcg > 2:387337/1‑229 (MQ=255)
gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGATCCTGCGA‑CCC‑GCCAAAAACGGCCGAGG‑AGTGGACGCCG‑CC‑GGGGA‑GGA‑CAAAATGGAAAcagcc > 2:1218616/1‑235 (MQ=255)
gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGATCCCGCGA‑TCC‑GGGAAAAACGCCCGGGG‑AGGGATACCCC‑CC‑GTGGA‑GGG‑CAAAACGGGAAAGCTg > 1:700092/1‑239 (MQ=255)
gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTTCGA‑TCC‑GGCAAAAACGCCCCAGA‑AGTGATCGCCG‑CC‑GGGAAGGGA‑CAAA‑TGGAAACGCTg > 1:1600093/1‑239 (MQ=255)
gcCAGCGGCTATCTGCAAACGCTCGGCGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGaa < 1:362212/239‑1 (MQ=255)
gcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGG‑TCCGGGCAAAAAC‑CCCGGGA‑AGGGATTGCCG‑CC‑GGGGA‑GGG‑CAAACTGGAAAAGCTGaa > 1:998861/1‑239 (MQ=255)
cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGAGCCTGCGG‑TCC‑CGGAAAAAAACCCGCGG‑AGTGAGCGCGC‑CC‑GGGAA‑GGA‑CAAAAAGGAAACACTGaaaaaga > 2:1475469/1‑236 (MQ=255)
ttATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCAAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAagtagt < 1:578597/237‑1 (MQ=255)
aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGa < 1:215609/238‑1 (MQ=255)
aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCGC‑TCC‑GGCCAAAACCCCCGCGG‑AGTGATCGCCG‑CC‑CGGGA‑GGA‑CAAACTGGCAACGCTGGAAAGTAGTCTGCCGGCAgg > 1:1230559/1‑239 (MQ=255)
cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑TCC‑GGGAAAAACACCCCAGA‑AGGGGTCGCCG‑CC‑GGCGA‑GGA‑CAAAACGGAAACACCGAAAAAGAGTCCGCCGGGAGGCgg > 2:1714359/1‑238 (MQ=255)
tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGGTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg < 1:570217/239‑1 (MQ=255)
tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCt < 1:760174/226‑1 (MQ=255)
tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg < 1:452522/239‑1 (MQ=255)
tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg < 1:629453/239‑1 (MQ=255)
ccgtcgacTTTAATCACACCGTTTTAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCCCGGAGAGGCGCCGGGTCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg < 2:182625/235‑1 (MQ=255)
cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGG‑TCC‑GGCAAAAACGCCCGAGA‑AGGGAGCGCCG‑CC‑GTGGA‑GGA‑CAAAATGGAAAAGCTGCAAAGTAGTCTGCCGGAAAGGGTgg > 1:770347/1‑239 (MQ=255)
gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGga < 1:812000/239‑1 (MQ=255)
cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGgag < 2:1037809/238‑1 (MQ=255)
cgacTTTAAGCACATAGTTTTAAAAGGCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATTGTGCGAAGGTCCAGAGTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGGGAAGGGGCG‑GGGGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTGTGCCGGAAGGCGTGgaga < 2:1646678/239‑1 (MQ=255)
tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGt < 1:899314/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 1:1558156/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 1:1508260/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 2:1269587/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 1:143782/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 1:695131/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 1:625740/239‑1 (MQ=255)
tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGGGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 2:916735/239‑1 (MQ=255)
aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑TCC‑GGCAAAAAAGCCCGAGG‑AGGGATCGCCG‑CC‑GGGAA‑GGA‑CCAACTGGGAAAGCTGGAAAGGAGGCCGCCGGAAGGCGTGGGGGTAGGTA‑ACAC‑At > 1:412437/1‑238 (MQ=255)
aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag < 1:40267/239‑1 (MQ=255)
aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag < 1:507038/239‑1 (MQ=255)
aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 1:94481/239‑1 (MQ=255)
aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 1:1475469/239‑1 (MQ=255)
aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCTGCGA‑TCC‑GGCAAAAAAGCCCGAGA‑AGGGATCGCCG‑CC‑GCGGA‑GGG‑CAAAATGGGAACGCAGAAAAAGAGTCTGCCGGAAGGCGGGGGGATAGTTC‑AAAC‑ATACGATCGcagccagc > 2:615447/1‑238 (MQ=255)
gggCTTGCCCGTTTATCGGGGCGAAGTTGCGAAGGGCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCGAAACAAAACGGCGAAGGCGAAGGGGCT‑GGGGGGGTGGTGATCCTGCGA‑ATC‑GTCAAAAACGGCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGG‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGTCAGCTCATGGAcc < 2:1415931/238‑1 (MQ=255)
gTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCGCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGATCTTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCgcgc < 2:1694691/239‑1 (MQ=255)
gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCa < 2:149602/239‑1 (MQ=255)
gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAagtagt < 1:880864/174‑1 (MQ=255)
gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATa < 1:689594/206‑1 (MQ=255)
ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc < 1:187941/238‑1 (MQ=255)
tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACcgcg < 1:1059170/218‑1 (MQ=255)
gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCaa < 1:1544463/239‑1 (MQ=255)
gAAGGGCGAGATGGGCCCGGAGATGCGTCGGGGCATTGCCGAACTAAACGGCGAAGGCGAGGTGGCG‑GGCGGGGTGGTGATCCGGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGc < 1:1217975/239‑1 (MQ=255)
gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGATCCTGCGG‑TCC‑CGCAAAAACGCCCGCGA‑AGGGATCGCCG‑CC‑GTGAA‑GGG‑GAAACTGGAAACGCGGGAAAGAAGTCTGCCGGAAGGGGGGGAGAGAGTTA‑CAAC‑AAAAGATCGCAGCCCGCTCATATACCGCGCCCCCGACCACCCCACCGGCAAGCTTCTggg > 2:1154965/1‑238 (MQ=255)
gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCC‑GGCAAAAACGCCCGCGA‑AGGGATCGCCG‑CC‑GGGAA‑GGA‑CAAAATGGAAACGCTGAAAAGAAGGTTGCCGGGAGGGGGGGAGATAGTTA‑AAAC‑ATACGGACGCCGCCAGCTCATTTACCGCGCCCTGCACAACCTCAGCGGCAAGTTGCTggg > 2:1717121/1‑238 (MQ=255)
tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:675234/238‑1 (MQ=255)
ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGC‑TCC‑GGCCAAAAAGCCCGAGA‑AGGGATCGCCG‑CC‑GTGGA‑GGA‑CAAACTGGAAACGCTGAAAAGGAGTCTGCCGGAAGGCGGGGGGATAATTACCAAC‑A‑ACGAACGCAGCCAACTCCTTCGCCCCGACATCGCCAACCTCCACCGCAAgcagccgggag > 2:1544536/1‑229 (MQ=255)
gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGGTCCCGCGG‑TCC‑GGCCAAAACGCCCCGGG‑AGGGATCGCCGCCC‑GTG‑C‑GGG‑CAAACCGGAAACGCCGGAAAGGAGTCTTCCGGCAGGGCGGGGGATAAGTA‑CAACAATAC‑ATCGCCGCCAACCCACTTGCCGCCCCATCCGCCCCCCCCCCGGCAAGTTGCttggcggca > 2:204533/1‑231 (MQ=255)
tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGGGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTa < 1:621037/239‑1 (MQ=255)
gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGGA‑GGA‑CAAAATGGAAACGCCGAAAAGGAGTCTGCCGGGAGGGGGGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCCGCCCCTTGACCGCGGCCACGACAACCTCAGCGGCAAGTTGCTGGGAGAGGTTAtt > 2:1540665/1‑239 (MQ=255)
gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGGTCCTGCGG‑TCC‑GGCAAAAACCCCCGAGA‑AGGGATCGCCG‑CC‑CGGGA‑GGG‑CAAACTGGGAACGCCGAAAAGAAGTCTGCCGGCAGGCGTGGGGAGAGGTA‑CAAC‑ATACGATACCCGCCCGCCCATTGACCGCGCCCTCCGCAACCCCACCGGCCACGTGCTGGGAGAGGTTAtt > 2:531844/1‑239 (MQ=255)
ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 1:822808/239‑1 (MQ=255)
gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGGGG‑TCC‑GGCAAAAACGCACCAGA‑AATGATCGCCG‑CC‑GTGAA‑GGACCAAACTGGAAACG‑GGAAAAGTAGTCCGCCGGGAAGAGGAGAGACAGGTA‑CAAC‑AAAAGGTCGCAGCACGCCCCGAGACCGGACCCTCGACAACCCCAGCGGCACGTTGACGGTGGAGGTTATTgtggc > 2:919361/1‑238 (MQ=255)
gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCG‑GGCGGGGTGGTGATTCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 2:874487/238‑1 (MQ=255)
gagaTGCGCCGGGGAATTGCGCAACTAAACGGAGAGGGAGAGGTGGCG‑GGGGGGGTGGGGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 2:384980/238‑1 (MQ=255)
agaTGGGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGTGGTGATCCTGCGG‑GAC‑GGCGAAAACGCCAGAGC‑AGGGAAAGCGG‑CC‑GGGCA‑GGA‑GATAGCGGAAACGCTGTAAACAAAGATTCCTGGAGGCGCGGGGAGAGTTG‑TAAC‑CTCCGATAGCAACCAGCTCCTTTACACCGCCATTGTAAAACTCCTGGACGAGTTGCTGGAGGGGTTTTTTgtggtg > 2:240322/1‑239 (MQ=255)
ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 1:900567/212‑1 (MQ=255)
aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCtgtg < 1:1512411/238‑1 (MQ=255)
cGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg < 2:412437/238‑1 (MQ=255)
aaCTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGGGGTCGCCG‑CC‑GGGGA‑GGG‑CAAACTGGAAAAGCTGAAAAGGAGTCTGCCGGAAGGCGGGGAGATAATTA‑CAAA‑ATACGAACGCAGCCAGCTCCTTTACCGCGCCCTCGACAACCCCAGCGGCAAGTTGGTGGGAGAGtttttt > 2:900567/1‑212 (MQ=255)
aaCTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑ACC‑GGCAAAAAACCCCGGGG‑AGGGGGCGGCC‑CC‑GGGAA‑GGG‑CAAACCGGAAACCCGGGAAAGAAGTCTGGCGGAAGGCGGGGAGGAAGGTA‑CAAC‑AAACGAAGCCCGCCAGCCCATTTGACGCGCCATCCACACCCCCACGGGCAAGCTGCTGGCAGAGTTTATTGGTGGGGCGGGAGCCTGGGGGCGGttt > 2:359736/1‑239 (MQ=255)
aCGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg < 1:1717121/239‑1 (MQ=255)
aCGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg < 1:1714359/239‑1 (MQ=255)
cgaaggcgaagTGGCG‑GGCGGGGGGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGGGA‑AGGGATCGCCG‑CC‑GTGAA‑GGA‑CAAAATGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGGGAAAGTTA‑AAAA‑AAAAGATCGCAGCCAGCTCATTGACCGCGCCATCCACAAACTCCCCGGCCAGTTGCTGGGAGAGTTTTTTGTGGGGGGGGGGGTCTGGGCGGTGTTTTTCTGGcggg > 2:798649/1‑236 (MQ=255)
gaaggcgaagGGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgt < 1:741280/239‑1 (MQ=255)
aaggcgaagTGGCG‑GGCGGGGGGGTGGTCCTGCGA‑TCC‑GGCAAAAAAGCCCGCGA‑AGTGGACGCCG‑CC‑GTGAA‑GGG‑CAAAATTGAAACGCTGAAAAGTAGGCTGCCGGGAGGGGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCCGCTCATTTACCCCGCCCTCGACAACCTCAGCCGCAAGTTGCTGGAAGAGGTtttt > 2:744532/1‑200 (MQ=255)
aggcgaagTGGCG‑GGCGGGGTGGTGACCCTGCGG‑TCC‑GTCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgtg < 2:941944/238‑1 (MQ=255)
aggcgaagTGGCG‑GGCGGGGGGGTGATCCTGCGA‑ACC‑GGCAAAAACGCCCGCGG‑AGTGATCGCCG‑CC‑GGGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGGAGGGGCGGGGATAATTT‑CAAC‑ATACGAACGCAGCCAGCTCATTGACCCCGCCATCGACAAACCCAGCGGCCAGTTGCTGGAGGAGGTTTTTGTGGTGGGGGGCGGCTGTGCGCCGGTTCTCTGGcgcgtgg > 2:389546/1‑233 (MQ=255)
gaagTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCt < 1:240322/238‑1 (MQ=255)
gcgggGTGGTGAGCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑GGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCtggt < 2:266514/238‑1 (MQ=255)
ggtggtGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtgtg > 2:1498747/1‑184 (MQ=255)
ggtggtGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtgtg < 1:1498747/184‑1 (MQ=255)
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TGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCC‑GGCAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GTGAA‑GGA‑CAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGT > NC_000913/599342‑599807
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
