Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F1 I2 R1 766 64.2 3232166 90.9% 2938038 104.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,803,347 (T)7→6 coding (2000/2145 nt) nrdE → ribonucleoside‑diphosphate reductase 2, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,803,3410T.100.0% 294.2 / NA 71coding (1994/2145 nt)nrdEribonucleoside‑diphosphate reductase 2, alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (38/33);  total (38/33)

TTTACTACCCTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCTTTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCG  >  NC_000913/2803206‑2803475
                                                                                                                                       |                                                                                                                                      
tttACTACCCTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCtttt                                                                                                                                     <  1:653745/139‑1 (MQ=255)
    ctacCCTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCttttttcc                                                                                                                                 >  1:1118593/1‑137 (MQ=255)
       cccTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCttttttccc                                                                                                                                <  2:1526261/137‑4 (MQ=255)
       cccTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCttttttccc                                                                                                                                >  1:1526261/1‑134 (MQ=255)
         cTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGAt                                                                                                                           <  1:982603/139‑1 (MQ=255)
         cTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGAt                                                                                                                           >  1:935418/1‑139 (MQ=255)
          tGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATa                                                                                                                          <  2:1480233/139‑1 (MQ=255)
           gCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGa                                                                                                                            >  2:1415267/1‑136 (MQ=255)
           gCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGa                                                                                                                            <  1:1415267/136‑1 (MQ=255)
           gCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATAc                                                                                                                         >  1:115326/1‑139 (MQ=255)
           gCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATAc                                                                                                                         >  2:842702/1‑139 (MQ=255)
            ccccGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATAcc                                                                                                                        >  2:1292374/1‑139 (MQ=255)
                gTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGcca                                                                                                                    <  2:1042203/139‑1 (MQ=255)
                 tttATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGccac                                                                                                                   <  2:287173/139‑1 (MQ=255)
                 tttATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGccac                                                                                                                   <  1:842702/139‑1 (MQ=255)
                        cTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTcgc                                                                                                            <  2:210356/139‑1 (MQ=255)
                        cTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTcgc                                                                                                            <  2:1507397/139‑1 (MQ=255)
                             gagaATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGatat                                                                                                       <  2:935418/139‑1 (MQ=255)
                                 aTCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGAt                                                                                                                           <  2:365542/115‑1 (MQ=255)
                                 aTCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGAt                                                                                                                           >  1:365542/1‑115 (MQ=255)
                                  tCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATcaaca                                                                                                  <  1:1292374/139‑1 (MQ=255)
                                          tGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAg                                                                                          >  1:1613664/1‑139 (MQ=255)
                                          tGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAg                                                                                          >  1:171229/1‑139 (MQ=255)
                                           gTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGa                                                                                         >  1:1300883/1‑139 (MQ=255)
                                                   aCGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGcc                                                                                 <  2:1118593/139‑1 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATcaacaa                                                                                                 >  2:619739/1‑120 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATcaacaa                                                                                                 <  1:619739/120‑1 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATcaaca                                                                                                  <  1:1410337/119‑1 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATcaaca                                                                                                  >  2:1410337/1‑119 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCa                                                                                           <  1:371953/126‑1 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCa                                                                                           >  2:371953/1‑126 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTgg                                                                              >  1:1608928/1‑139 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTgg                                                                              >  2:1428830/1‑139 (MQ=255)
                                                      cTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGACTGTCGCTGACGC‑TTTTTTCCCCGATACCCCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTgg                                                                              >  1:1611288/1‑139 (MQ=255)
                                                         aCGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGgcgc                                                                           <  2:171229/139‑1 (MQ=255)
                                                               ttGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGt                                                                     <  2:1608928/139‑1 (MQ=255)
                                                                tGGCGCAAACGAGATCATCGACCCCTCCGGGGCAGCCACTCGCCATGTAGGTCAGGGGCTGTTCATGACGC‑TCTTCACCCCGTTACCGCCACCACTCGCGATATCAACCAAGCGCAGATTTACGCCTGGCGCAAAGGTa                                                                    <  1:786888/139‑1 (MQ=255)
                                                                       gAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGcca                                                                                                                    >  2:796655/1‑84 (MQ=255)
                                                                       gAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGcca                                                                                                                    <  1:796655/84‑1 (MQ=255)
                                                                       gAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAAc                                                             <  2:1613664/139‑1 (MQ=255)
                                                                                  cGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACa                                                  >  2:832358/1‑139 (MQ=255)
                                                                                    acacCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGc                                                           >  2:1521477/1‑128 (MQ=255)
                                                                                    acacCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGc                                                           <  1:1521477/128‑1 (MQ=255)
                                                                                       ccTACGCGGAAGCGACTCGCCATGTCGATCAGGGACTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGc                                             <  2:1611288/139‑1 (MQ=255)
                                                                                        cTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGcc                                            >  1:793107/1‑139 (MQ=255)
                                                                                          aCGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTg                                          >  1:611441/1‑139 (MQ=255)
                                                                                           cgcgGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGc                                         >  1:729297/1‑139 (MQ=255)
                                                                                           cgcgGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGc                                         >  2:1364246/1‑139 (MQ=255)
                                                                                                 aGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGa                                   <  1:1428830/139‑1 (MQ=255)
                                                                                                     aCTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCaaaa                                                              >  1:1168187/1‑108 (MQ=255)
                                                                                                     aCTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCaaaa                                                              <  2:1168187/108‑1 (MQ=255)
                                                                                                     aCTCGCCATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTAAATCCGCCTGCGTCAGATggt                               >  2:197997/1‑138 (MQ=255)
                                                                                                           cATGTCGATCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCCGCGTCAGATGGCGCTGGa                         <  1:893733/139‑1 (MQ=255)
                                                                                                                   tCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCaa                                                                         <  1:811829/83‑1 (MQ=255)
                                                                                                                   tCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCaa                                                                         >  2:811829/1‑83 (MQ=255)
                                                                                                                   tCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTg                 <  2:1300883/139‑1 (MQ=255)
                                                                                                                   tCAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTg                 >  1:942383/1‑139 (MQ=255)
                                                                                                                    cAGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGa                >  1:1321466/1‑139 (MQ=255)
                                                                                                                     aGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGc                                                           >  1:843013/1‑95 (MQ=255)
                                                                                                                     aGGGGCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGc                                                           <  2:843013/95‑1 (MQ=255)
                                                                                                                       gggCTGTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAAt             >  2:1215675/1‑139 (MQ=255)
                                                                                                                            gTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAg        <  2:146423/139‑1 (MQ=255)
                                                                                                                            gTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAg        >  1:146423/1‑139 (MQ=255)
                                                                                                                            gTCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCCGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAg        >  2:31422/1‑139 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGa                                                                                                          >  2:110184/1‑40 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGa                                                                                                          <  1:110184/40‑1 (MQ=38)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAgcg                                                                                             <  1:600186/53‑1 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAgcg                                                                                             >  2:600186/1‑53 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGc                                                           >  2:826114/1‑87 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGc                                                           <  1:826114/87‑1 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAgg       >  1:1425519/1‑139 (MQ=255)
                                                                                                                             tCGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACGGAAATTGCAgg       >  2:1045570/1‑139 (MQ=255)
                                                                                                                              cGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACg                                                            >  2:47268/1‑85 (MQ=255)
                                                                                                                              cGCTGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACg                                                            <  1:47268/85‑1 (MQ=255)
                                                                                                                                 tGACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGGGCTGGAAGGCACTGAAATTGAAGGCTGc   <  1:197997/139‑1 (MQ=255)
                                                                                                                                  gACGC‑TTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCg  >  2:83966/1‑139 (MQ=255)
                                                                                                                                       |                                                                                                                                      
TTTACTACCCTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCTTTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCG  >  NC_000913/2803206‑2803475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A