Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F1 I1 R1 770 51.4 2439994 93.8% 2288714 110.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,654,538 G→A S132S (AGC→AGT)  sseB ← rhodanase‑like enzyme, sulfur transfer from thiosulfate

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,654,5380GA100.0% 230.9 / NA 71S132S (AGC→AGT) sseBrhodanase‑like enzyme, sulfur transfer from thiosulfate
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (33/38);  total (33/38)

CTTTAATTGAACAAATAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGGCTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAGCGTGCGAACGGGCATT  >  NC_000913/2654402‑2654673
                                                                                                                                        |                                                                                                                                       
ctTTAATTGAACAAATAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGact                                                                                                                                       >  1:1163371/1‑139 (MQ=255)
   tAATTGAACAAATAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGactgct                                                                                                                                    <  1:713667/139‑1 (MQ=255)
         aaCAAATAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCgg                                                                                                                              >  2:393643/1‑139 (MQ=255)
         aaCAAATAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCgg                                                                                                                              >  2:1065075/1‑139 (MQ=255)
             aaTAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGAttt                                                                                                                          <  1:477620/139‑1 (MQ=255)
             aaTAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGAttt                                                                                                                          <  2:1163371/139‑1 (MQ=255)
                    gCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCtt                                                                                                                   <  1:613258/139‑1 (MQ=255)
                      aCGCTTCACCGGCTTAATGCTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCTCTCTTCa                                                                                                                 <  1:797895/139‑1 (MQ=255)
                       cGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCAc                                                                                                                >  1:1000186/1‑139 (MQ=255)
                          ttCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCaa                                                                                                             <  1:965138/139‑1 (MQ=255)
                               cGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGAtt                                                                                                                           >  2:303006/1‑120 (MQ=255)
                               cGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGAtt                                                                                                                           <  1:303006/120‑1 (MQ=255)
                                    tAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACt                                                                                                   >  2:210070/1‑139 (MQ=255)
                                      aTGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGa                                                                                                 >  2:112158/1‑139 (MQ=255)
                                      aTGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGa                                                                                                 >  2:686045/1‑139 (MQ=255)
                                            ttAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCAc                                                                                           <  1:1063757/139‑1 (MQ=255)
                                            ttAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCAc                                                                                           <  1:157472/139‑1 (MQ=255)
                                            ttAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATAACAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTcc                                                                                                                        <  2:1000489/110‑1 (MQ=255)
                                            ttAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATAACAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTcc                                                                                                                        >  1:1000489/1‑110 (MQ=255)
                                             tAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCAcg                                                                                          <  1:1065075/139‑1 (MQ=255)
                                              aaaTAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCAcgc                                                                                         <  1:1154109/139‑1 (MQ=255)
                                                   aGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAAt                                                                                                            <  1:24129/115‑1 (MQ=255)
                                                   aGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAAt                                                                                                            >  2:24129/1‑115 (MQ=255)
                                                      tggtgAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATaaa                                                                                 <  1:393643/139‑1 (MQ=255)
                                                         tgagtgaATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTc                                                                              >  2:907035/1‑139 (MQ=255)
                                                           agtgaATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCtt                                                                            >  1:1115254/1‑139 (MQ=255)
                                                             tgaATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTa                                                                          <  1:907035/139‑1 (MQ=255)
                                                                     tcaTTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTgg                                                                  <  2:1115254/139‑1 (MQ=255)
                                                                         ttGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGt                                                              >  2:282207/1‑139 (MQ=255)
                                                                          tgtgCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGtt                                                             <  1:210070/139‑1 (MQ=255)
                                                                          tgtgCTGGCGGCTCTGCGAATTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATATCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGtt                                                             <  1:797342/139‑1 (MQ=255)
                                                                           gtgCTTGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGttt                                                            <  1:686045/139‑1 (MQ=255)
                                                                           gtgCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCAt                                                                                    >  1:167744/1‑115 (MQ=255)
                                                                           gtgCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCAt                                                                                    <  2:167744/115‑1 (MQ=255)
                                                                             gCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTgg                                                          <  2:31839/139‑1 (MQ=255)
                                                                              cTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGc                                                         >  1:126460/1‑139 (MQ=255)
                                                                                ggcggcTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGttt                                                            >  1:1206242/1‑134 (MQ=255)
                                                                                ggcggcTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGttt                                                            <  2:1206242/134‑1 (MQ=255)
                                                                                   ggcTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTaa                                                    >  2:259898/1‑139 (MQ=255)
                                                                                           gACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCaa                                                                                                             >  1:132764/1‑74 (MQ=255)
                                                                                           gACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCaa                                                                                                             <  2:132764/74‑1 (MQ=255)
                                                                                              ttCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGt                                          >  1:870452/1‑138 (MQ=255)
                                                                                              ttCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGt                                          <  2:870452/138‑1 (MQ=255)
                                                                                                  gATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGc                                     >  2:2998/1‑139 (MQ=255)
                                                                                                       tatCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCtt                                                                                                                   >  2:300489/1‑56 (MQ=255)
                                                                                                       tatCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCtt                                                                                                                   <  1:300489/56‑1 (MQ=255)
                                                                                                        atCAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAgtg                               <  1:2998/139‑1 (MQ=255)
                                                                                                          cAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTc                             >  2:115412/1‑139 (MQ=255)
                                                                                                          cAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTc                             <  1:152609/139‑1 (MQ=255)
                                                                                                          cAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTc                             <  2:126460/139‑1 (MQ=255)
                                                                                                          cAGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTc                             <  2:1000186/139‑1 (MQ=255)
                                                                                                           aGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCAcg                                                                                          >  2:1177378/1‑77 (MQ=255)
                                                                                                           aGCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCAcg                                                                                          <  1:1177378/77‑1 (MQ=255)
                                                                                                            gCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGttt                                                            <  1:1047152/106‑1 (MQ=255)
                                                                                                            gCGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGttt                                                            >  2:1047152/1‑106 (MQ=255)
                                                                                                             cGATTCACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCAtc                          >  2:400107/1‑139 (MQ=255)
                                                                                                                  gaCCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATACATTCTTTACCGGTTGGCAGTTTgg                                                          >  1:771458/2‑102 (MQ=255)
                                                                                                                  cACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTgg                                                          <  2:771458/102‑1 (MQ=255)
                                                                                                                  cACCGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCaaa                     >  2:215275/1‑139 (MQ=255)
                                                                                                                  cACCGCCTTCCAGGATTTCCTGACTGCACAGCGGATTTCCCTCATCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCaaa                     <  1:115412/139‑1 (MQ=255)
                                                                                                                     cGCCTTCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAg                  >  1:601997/1‑139 (MQ=255)
                                                                                                                          tCCAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCAcc                                                                                                               >  1:1127843/1‑41 (MQ=255)
                                                                                                                          gccAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCAcc                                                                                                               <  2:1127843/40‑1 (MQ=255)
                                                                                                                            cAGGATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAGCGTGCGa           <  1:215275/139‑1 (MQ=255)
                                                                                                                               gATTTCCTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAGCGTGCGAACg        >  1:467103/1‑139 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTa                                                                          >  2:331626/1‑68 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTa                                                                          <  1:331626/68‑1 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTgg                                                          >  2:492389/1‑84 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTgg                                                          <  1:492389/84‑1 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTc                             >  1:966397/1‑113 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTc                             <  2:966397/113‑1 (MQ=255)
                                                                                                                                    ccTGACTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAGCGTGCGAACGGGCAt   >  1:163311/1‑139 (MQ=255)
                                                                                                                                     cTGACTGCTCAGCGGATTTCCCTCTTCACCAATAAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAGCGTGCGAACGGGCAtt  <  1:112158/139‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CTTTAATTGAACAAATAAAAGCACGCTTCACCGGCTTAATGGTTTTAAATAAGGTGGTGAGTGAATCAATCATTTGTGCTGGCGGCTCTGCGACTTCCGATAATATCAGCGATTCACCGCCTTCCAGGATTTCCTGGCTGCTCAGCGGATTTCCCTCTTCACCAATCAACAAACTGATTTCACGCGGCATAAATTCTTTACCGGTTGGCAGTTTGGCATTAAGGAAGAGCGTTTCGCCAAGTGTCATCTCAAACAGCGTGCGAACGGGCATT  >  NC_000913/2654402‑2654673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A