Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F1 I2 R1
|
780 |
68.3 |
3343050 |
93.5% |
3125751 |
102.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,614,614 |
Δ2 bp |
coding (681‑682/849 nt) |
focB → |
putative formate transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,614,613 | 0 | C | . | 100.0%
| 301.9
/ NA
| 72 | coding (680/849 nt) | focB | putative formate transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (34/38); total (34/38) |
| * | NC_000913 | 2,614,614 | 0 | T | . | 100.0%
| 301.9
/ NA
| 72 | coding (681/849 nt) | focB | putative formate transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (34/38); total (34/38) |
TTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAT > NC_000913/2614476‑2614745
||
ttATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCTCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCTCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGccccc < 1:364025/139‑2 (MQ=255)
ttATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGccccc < 2:827112/139‑2 (MQ=255)
cGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCcccccccctt < 2:1449404/139‑3 (MQ=255)
ggCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGTACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCccccccccttct > 1:956843/1‑135 (MQ=255)
ggCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCccccccccttct > 2:565302/1‑135 (MQ=255)
ggCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCt > 2:788859/1‑139 (MQ=255)
tGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGgcg < 1:565302/139‑1 (MQ=255)
aaTCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAg > 2:424755/1‑139 (MQ=255)
tcgtcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGca > 2:622590/1‑131 (MQ=255)
tcgtcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGca < 1:622590/131‑1 (MQ=255)
tcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTTTCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGca < 1:305627/128‑1 (MQ=255)
tcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGgcg < 1:752028/126‑1 (MQ=255)
tcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGgcg > 2:752028/1‑126 (MQ=255)
tcgCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGca > 2:305627/1‑128 (MQ=255)
gCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGAc > 2:758458/1‑139 (MQ=255)
tGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAAtt > 1:368954/1‑139 (MQ=255)
ttttGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTc > 1:1305197/1‑139 (MQ=255)
tCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGa > 2:26575/1‑139 (MQ=255)
tCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGa > 1:897906/1‑139 (MQ=255)
tCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGa > 1:1266539/1‑139 (MQ=255)
tCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGa > 1:1331015/1‑139 (MQ=255)
ccTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 2:1301379/139‑1 (MQ=255)
ccTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 2:1266539/139‑1 (MQ=255)
tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGccccc > 1:1492407/1‑82 (MQ=255)
tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGccccc < 2:1492407/83‑2 (MQ=255)
tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACt > 1:79150/1‑131 (MQ=255)
tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACt < 2:79150/131‑1 (MQ=255)
tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCa > 1:1349468/1‑139 (MQ=255)
tGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCa < 1:31844/139‑1 (MQ=255)
tttGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 2:897906/139‑1 (MQ=255)
tttGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 2:1076576/139‑1 (MQ=255)
tttGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:758458/139‑1 (MQ=255)
tGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCa > 1:1010190/1‑139 (MQ=255)
cAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat < 1:26575/139‑1 (MQ=255)
cAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat < 1:788859/139‑1 (MQ=255)
gAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt > 1:839695/1‑117 (MQ=255)
gAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 2:839695/117‑1 (MQ=255)
gCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt < 2:1349468/139‑1 (MQ=255)
cACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTg > 1:6976/1‑139 (MQ=255)
cACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTg < 1:424755/139‑1 (MQ=255)
cTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCt < 2:956843/139‑1 (MQ=255)
tATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAg > 1:1252368/1‑68 (MQ=255)
tATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAg < 2:1252368/68‑1 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGc > 2:1149125/1‑58 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGc < 1:1149125/58‑1 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAtt > 1:467477/1‑109 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAtt < 2:467477/109‑1 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 1:257993/138‑1 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg > 2:257993/1‑138 (MQ=255)
aTTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGc > 1:547282/1‑139 (MQ=255)
tttgtttgTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 2:547282/139‑1 (MQ=255)
ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTg > 2:1594004/1‑139 (MQ=255)
aTTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCgg > 1:478993/1‑122 (MQ=255)
aTTCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCgg < 2:478993/122‑1 (MQ=255)
tCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTg > 2:1196790/1‑43 (MQ=37)
tCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTg < 1:1196790/43‑1 (MQ=37)
tCCGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAAtattat < 2:1331015/139‑1 (MQ=255)
cGTTCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATcg > 1:500066/1‑139 (MQ=255)
ttCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat < 2:1089664/96‑1 (MQ=255)
ttCGCCATTGCCATTCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat > 1:1089664/1‑96 (MQ=255)
ccattgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:1010190/139‑1 (MQ=255)
ccattgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:368954/139‑1 (MQ=255)
ccattgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:115542/139‑1 (MQ=255)
cattgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtgc > 1:553934/1‑139 (MQ=255)
tgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGgcg < 2:683875/41‑1 (MQ=37)
tgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGgcg > 1:683875/1‑41 (MQ=37)
tgccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtgcggt > 1:1603563/1‑139 (MQ=255)
gccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGcggtgcggtg < 2:552784/139‑1 (MQ=255)
ccattCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCggtgcggtgc < 2:6976/139‑1 (MQ=255)
tCGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt < 2:1305197/139‑1 (MQ=255)
cGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 2:1447161/73‑1 (MQ=255)
cGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 1:1447161/1‑73 (MQ=255)
cGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTtta < 1:761686/80‑1 (MQ=255)
cGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTtta > 2:761686/1‑80 (MQ=255)
cGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 1:218182/108‑1 (MQ=255)
cGCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt > 2:218182/1‑108 (MQ=255)
gCCATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGa < 2:500066/139‑1 (MQ=255)
ccATTTCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAg < 2:909712/139‑1 (MQ=255)
tttCGCCC‑‑CCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAt > 2:173767/1‑139 (MQ=255)
||
TTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTAT > NC_000913/2614476‑2614745
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
