Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F1 I1 R1
|
771 |
44.8 |
2153074 |
94.1% |
2026042 |
109.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
2,614,614 |
Δ4 bp |
coding (681‑684/849 nt) |
focB → |
putative formate transporter |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
2614614 |
2614617 |
4 |
39 [0] |
[0] 38 |
focB |
putative formate transporter |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 2614613 | 0 (0.000) | 38 (0.840) |
32/210 |
0.3 |
100% |
coding (680/849 nt) |
focB |
putative formate transporter |
| ? | NC_000913 |
2614618 = |
0 (0.000) | coding (685/849 nt) |
focB |
putative formate transporter |
GATK/CNVnator alignment
N/A
