Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F1 I2 R1 772 77.0 3769570 91.6% 3452926 105.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,414,699 T→C intergenic (+27/‑48) ackA → / → pta acetate kinase A and propionate kinase 2/phosphate acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,414,6990TC100.0% 251.7 / NA 71intergenic (+27/‑48)ackA/ptaacetate kinase A and propionate kinase 2/phosphate acetyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/40);  total (31/40)

TTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGTGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGATCCGTGCA  >  NC_000913/2414565‑2414824
                                                                                                                                      |                                                                                                                             
ttCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAGCGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTg                                                                                                                           >  2:979802/1‑139 (MQ=255)
       aaTCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTa                                                                                                                    <  2:940315/139‑1 (MQ=255)
               ttCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCa                                                                                                            >  2:935841/1‑139 (MQ=255)
                  atcaACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAAt                                                                                                         >  1:949039/1‑139 (MQ=255)
                   tcaACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATc                                                                                                        >  2:972892/1‑139 (MQ=255)
                      acaaAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATcggc                                                                                                     <  1:646887/139‑1 (MQ=255)
                         aagaagGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGt                                                                                                  >  2:960475/1‑139 (MQ=255)
                          agaagGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACTCCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTa                                                                                                 >  2:1847667/1‑139 (MQ=255)
                           gaagGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTaa                                                                                                <  2:1261490/139‑1 (MQ=255)
                           gaagGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTaa                                                                                                <  1:972892/139‑1 (MQ=255)
                           gaagGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTaa                                                                                                <  2:859973/139‑1 (MQ=255)
                               gTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            <  1:1671063/139‑1 (MQ=255)
                                tACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaaa                                                                                           <  2:949039/139‑1 (MQ=255)
                                 aCCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAag                                                                                          >  2:665942/1‑139 (MQ=255)
                                 aCCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAag                                                                                          >  2:663769/1‑139 (MQ=255)
                                 aCCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAag                                                                                          <  2:77507/139‑1 (MQ=255)
                                 aCCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAag                                                                                          <  1:523813/139‑1 (MQ=255)
                                  cccGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCGAGACGCGAGCCGCCTGACTGCCTCATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            <  2:1194702/136‑1 (MQ=255)
                                  cccGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            <  2:754824/136‑1 (MQ=255)
                                  cccGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            >  1:754824/1‑136 (MQ=255)
                                  cccGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            >  1:1194702/1‑136 (MQ=255)
                                      tCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGAt                                                                                     >  2:1748121/1‑139 (MQ=255)
                                      tCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGCTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCCCCAGCTCAGCTGGCGGCGATGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGAt                                                                                     >  1:943653/1‑139 (MQ=255)
                                           cGGTGGTTATCCCAACCAACGAAGAACTTGTTATCGCGCAAGACCCGGGCCGCCTGAGTGCCTGATTTCACACCGCCAGCTCAGCTAGCGGCGCTGTTTTGTAACCGACCAAATCGCGGGTAACGAAAGAGGATAAAcc                                                                                <  1:428666/139‑1 (MQ=255)
                                              tggtTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCgtg                                                                             <  1:407532/139‑1 (MQ=255)
                                                gtTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTc                                                                           >  2:1352110/1‑139 (MQ=255)
                                                gtTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTc                                                                           <  1:665942/139‑1 (MQ=255)
                                                gtTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTc                                                                           <  1:960475/139‑1 (MQ=255)
                                                gtTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTc                                                                           <  1:1748121/139‑1 (MQ=255)
                                                  tATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTccc                                                                         <  2:551801/139‑1 (MQ=255)
                                                   aTCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTcccc                                                                        <  1:1173066/139‑2 (MQ=255)
                                                        aaccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGtatta                                                                   <  2:1079464/139‑1 (MQ=255)
                                                        aaccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGtatta                                                                   <  1:1352110/139‑1 (MQ=255)
                                                          ccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTa                                                                                                                    >  1:1619256/1‑88 (MQ=255)
                                                          ccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTa                                                                                                                    <  2:1619256/88‑1 (MQ=255)
                                                          ccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAag                                                                                          <  2:1296352/114‑1 (MQ=255)
                                                          ccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAag                                                                                          >  1:1296352/1‑114 (MQ=255)
                                                          ccaacGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGtattatt                                                                 >  2:882560/1‑139 (MQ=255)
                                                              cGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGc                                                             >  1:577859/1‑139 (MQ=255)
                                                               gaagaaCTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCt                                                            <  2:1427575/139‑1 (MQ=255)
                                                                  gaaCTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCt                                                                                                                            >  2:1189149/1‑72 (MQ=255)
                                                                  gaaCTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCt                                                                                                                            <  1:1189149/72‑1 (MQ=255)
                                                                  gaaCTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGAt                                                         <  1:882560/139‑1 (MQ=255)
                                                                    aCTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATcc                                                       <  1:979802/139‑1 (MQ=255)
                                                                     cTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATccc                                                      >  1:1500166/1‑139 (MQ=255)
                                                                        gTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            <  1:119197/98‑1 (MQ=255)
                                                                        gTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            >  2:119197/1‑98 (MQ=255)
                                                                                   aGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCg                                        <  1:499308/139‑1 (MQ=255)
                                                                                        cgAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGt                                   <  1:935841/139‑1 (MQ=255)
                                                                                          aGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTc                                                                           >  2:1723042/1‑97 (MQ=255)
                                                                                          aGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTc                                                                           <  1:1723042/97‑1 (MQ=255)
                                                                                          aGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCg                                                                        <  2:869461/100‑1 (MQ=255)
                                                                                          aGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCg                                                                        >  1:869461/1‑100 (MQ=255)
                                                                                              gccTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGAt                                                                                     >  1:436297/1‑83 (MQ=255)
                                                                                              gccTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGAt                                                                                     <  2:436297/83‑1 (MQ=255)
                                                                                               ccTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCg                                                                        >  1:767959/1‑95 (MQ=255)
                                                                                               ccTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCg                                                                        <  2:767959/95‑1 (MQ=255)
                                                                                                         tGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            <  2:39198/65‑1 (MQ=255)
                                                                                                         tGATTTCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            >  1:39198/1‑65 (MQ=255)
                                                                                                            tttCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAAc                                                                                 >  1:1162583/1‑73 (MQ=255)
                                                                                                            tttCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCAAAATCGGCGGTAACGAAAGAGGATAAAc                                                                                 <  2:1162583/73‑1 (MQ=255)
                                                                                                             ttCACACCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGc              <  2:1500166/139‑1 (MQ=255)
                                                                                                                  acCGCCAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGAt         <  2:577859/139‑1 (MQ=255)
                                                                                                                      ccAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCg                                                                        >  1:1533913/1‑72 (MQ=255)
                                                                                                                      ccAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCg                                                                        <  2:1533913/72‑1 (MQ=255)
                                                                                                                      ccAGCTCAGCTGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGATCCGt     >  1:14410/1‑139 (MQ=255)
                                                                                                                         gctcagctGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGATCCGTGCa  >  2:1568903/1‑139 (MQ=255)
                                                                                                                              gctGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            <  2:409113/44‑1 (MQ=255)
                                                                                                                              gctGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGaa                                                                                            >  1:409113/1‑44 (MQ=255)
                                                                                                                               ctGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCg                                        <  1:1369944/95‑1 (MQ=255)
                                                                                                                               ctGGCGGCGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCg                                        >  2:1369944/1‑95 (MQ=255)
                                                                                                                                      |                                                                                                                             
TTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGATTTCACACCGCCAGCTCAGCTGGCGGTGCTGTTTTGTAACCCGCCAAATCGGCGGTAACGAAAGAGGATAAACCGTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGATCCGTGCA  >  NC_000913/2414565‑2414824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A