Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A5 F1 I2 R1 | 772 | 77.0 | 3769570 | 91.6% | 3452926 | 105.3 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,764,608 | T→C | I182M (ATA→ATG) | yfjL ← | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,764,608 | 0 | T | C | 100.0% | 304.5 / NA | 85 | I182M (ATA→ATG) | yfjL | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/41); total (44/41) | |||||||||||
GTCATCAGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGTATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCAT > NC_000913/2764476‑2764738 | gTCATCAGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTc > 2:1435988/1‑139 (MQ=255) catcaGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGAGCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt > 2:1179629/1‑139 (MQ=255) catcaGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt < 2:967422/139‑1 (MQ=255) gCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATcc < 2:699580/139‑1 (MQ=255) cTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTa > 2:1408708/1‑139 (MQ=255) tgtgAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 2:749233/1‑139 (MQ=255) tgtgAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 2:951668/1‑139 (MQ=255) tgtgAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg < 1:1408708/139‑1 (MQ=255) tgtgAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 1:891269/1‑139 (MQ=255) tgtgAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 1:1454151/1‑139 (MQ=255) gCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTcc > 1:1647687/1‑139 (MQ=255) gagaATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGAt > 1:893461/1‑121 (MQ=255) gagaATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGAt < 2:893461/121‑1 (MQ=255) tGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 2:572762/139‑1 (MQ=255) tGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 2:1464560/139‑1 (MQ=255) tGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 2:891269/139‑1 (MQ=255) cTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAgg > 2:75486/1‑139 (MQ=255) cccTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATg > 1:448737/1‑139 (MQ=255) cgTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACt < 1:749233/139‑1 (MQ=255) gTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACtt > 1:1729893/1‑139 (MQ=255) caGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt < 2:1839120/94‑1 (MQ=255) caGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt > 1:1839120/1‑94 (MQ=255) cAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGc < 1:1435988/139‑1 (MQ=255) aGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 2:72898/112‑1 (MQ=255) aGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa > 1:72898/1‑112 (MQ=255) aTGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCAt < 2:1729893/139‑1 (MQ=255) gCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCg > 1:42846/1‑139 (MQ=255) gCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCg > 2:1828744/1‑139 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGTTGa < 2:267056/112‑1 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGa > 1:267056/1‑112 (MQ=255) gCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 2:332586/104‑1 (MQ=255) gCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa > 1:332586/1‑104 (MQ=255) ccAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCaa > 1:1590659/1‑139 (MQ=255) gTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa < 2:1647687/139‑1 (MQ=255) gTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa < 2:448737/139‑1 (MQ=255) tCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGc > 1:139464/1‑139 (MQ=255) cGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg > 1:1608970/1‑88 (MQ=255) cGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg < 2:1608970/88‑1 (MQ=255) cGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa < 2:1321520/119‑1 (MQ=255) cGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTCCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa > 1:1321520/1‑119 (MQ=255) gCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGa > 1:370824/1‑95 (MQ=255) gCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGa < 2:370824/95‑1 (MQ=255) cGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTg > 2:126852/1‑62 (MQ=255) cGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTg < 1:126852/62‑1 (MQ=255) cGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg < 2:249436/85‑1 (MQ=255) cGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg > 1:249436/1‑85 (MQ=255) ttCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAg < 2:1454151/139‑1 (MQ=255) gagaATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTaaa > 2:1382857/1‑139 (MQ=255) gagaATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTaaa > 2:585039/1‑139 (MQ=255) agaATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa < 2:1266156/99‑1 (MQ=255) agaATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa > 1:1266156/1‑99 (MQ=255) aTGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGt < 2:437501/127‑1 (MQ=255) aTGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGt > 1:437501/1‑127 (MQ=255) gACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 2:1149007/65‑1 (MQ=255) gACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa > 1:1149007/1‑65 (MQ=255) ccccATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGGCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAATATTGTc > 1:1254845/1‑139 (MQ=255) ccccATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTc < 1:1179629/139‑1 (MQ=255) ccATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa < 2:528262/105‑1 (MQ=255) ccATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa > 1:528262/1‑105 (MQ=255) ccATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCtg < 2:1737904/139‑1 (MQ=255) aTCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACt < 1:1410599/67‑1 (MQ=255) aTCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACt > 2:1410599/1‑67 (MQ=255) cTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCtg > 2:158031/1‑129 (MQ=255) cTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCtg < 1:158031/129‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCa > 2:1713409/1‑67 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCa < 1:1713409/67‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGAt > 2:1518930/1‑82 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGAt < 1:1518930/82‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATAc < 2:213748/102‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATAc > 1:213748/1‑102 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCg < 1:626109/130‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCg > 2:626109/1‑130 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCG‑TTGTTGAgg > 1:1462629/1‑139 (MQ=255) ggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg > 2:991125/1‑45 (MQ=255) ggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg < 1:991125/45‑1 (MQ=255) ggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAgg < 2:1590659/139‑1 (MQ=255) ggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAgg < 1:1382857/139‑1 (MQ=255) gCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGtt > 2:1621726/1‑108 (MQ=255) gCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGtt < 1:1621726/108‑1 (MQ=255) gCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCAt < 1:585039/139‑1 (MQ=255) gCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCAt > 1:1020649/1‑139 (MQ=255) ccAGCCGCATGTTCTTGATCGCTAGAAGTTCCAGTTcgcg > 1:1103813/1‑40 (MQ=255) ccAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGt > 2:482782/1‑35 (MQ=255) ccAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGt < 1:482782/35‑1 (MQ=255) ccAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTcgcg < 2:1103813/40‑1 (MQ=255) | GTCATCAGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGTATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCAT > NC_000913/2764476‑2764738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |