Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F1 I1 R1
|
757 |
76.1 |
3598070 |
93.4% |
3360597 |
108.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,004,160 |
(G)7→6 |
coding (214/711 nt) |
ycbF → |
putative periplasmic pilin chaperone |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,004,154 | 0 | G | . | 100.0%
| 312.6
/ NA
| 76 | coding (208/711 nt) | ycbF | putative periplasmic pilin chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (41/35); total (41/35) |
TTGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACG > NC_000913/1004016‑1004285
|
ttGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCg < 1:1599485/139‑1 (MQ=255)
gtCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGt > 1:1375460/1‑139 (MQ=255)
ggcggAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGcc > 1:1269039/1‑139 (MQ=255)
cggAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAg < 2:1269039/139‑1 (MQ=255)
tCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTc > 2:1360608/1‑139 (MQ=255)
gacagaGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACt > 1:1104255/1‑139 (MQ=255)
aaTCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtctc > 2:144412/1‑139 (MQ=255)
aTCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTcc > 1:765391/1‑139 (MQ=255)
cGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTg < 2:1375460/139‑1 (MQ=255)
tatCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAg < 2:765391/139‑1 (MQ=255)
atCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGc < 2:1104255/139‑1 (MQ=255)
atCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGc < 2:211006/139‑1 (MQ=255)
tCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGcc > 2:96665/1‑139 (MQ=255)
tCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGcc > 2:1345651/1‑139 (MQ=255)
tATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAg < 1:1294447/97‑1 (MQ=255)
tATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAg > 2:1294447/1‑97 (MQ=255)
aTTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCgg < 1:3183/139‑1 (MQ=255)
ttttACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGt > 2:1048387/1‑139 (MQ=255)
aCTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCggggg > 2:1690731/1‑72 (MQ=255)
aCTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCggggg < 1:1690731/72‑1 (MQ=255)
gACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTcc < 2:1176414/107‑1 (MQ=255)
gACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTcc > 1:1176414/1‑107 (MQ=255)
aCTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGccc > 2:222266/1‑128 (MQ=255)
aCTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGccc < 1:222266/128‑1 (MQ=255)
aCTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAgg > 2:1474055/1‑139 (MQ=255)
aCTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAgg > 1:929224/1‑139 (MQ=255)
tACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCgggggg < 2:1224887/64‑1 (MQ=255)
tACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCgggggg > 1:1224887/1‑64 (MQ=255)
ccAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTg < 1:1345651/139‑1 (MQ=255)
gTCAGGAATCCTGGCTTATTAACCGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:1209764/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCg > 1:754679/1‑67 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCg < 2:754679/67‑1 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGcc > 1:1227238/1‑75 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGcc < 2:1227238/75‑1 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCa < 2:961089/76‑1 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCa > 1:961089/1‑76 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAg > 1:1754151/1‑115 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAg < 2:1754151/115‑1 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:1021601/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 2:1697508/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 2:607187/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:330665/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:122243/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:826061/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:1327404/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcgc > 1:773185/1‑139 (MQ=255)
gTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGACCGTTgcgc > 1:1096311/1‑139 (MQ=255)
ggCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACg < 1:1323700/139‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCt > 1:513235/1‑76 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCt > 1:660784/1‑76 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCt < 2:513235/76‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCt < 2:660784/76‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCTCGGTACGACAGGCACGTTGCGCTTGCTGAGAATGGAAAGc < 2:1096311/139‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGc < 1:812013/139‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGc < 1:1351128/139‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGc > 2:972517/1‑139 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGc < 2:1372219/139‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑‑GGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTcc < 2:1532192/77‑1 (MQ=255)
ttaACAGTAAAATCAACCGCCCAACGCGTTGGGCC‑‑GGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTcc > 1:1532192/1‑77 (MQ=255)
tAAAATCAACCGCCCATCGCGTTGGGCC‑GGGGTGAAGCGTCGACAGTGCCAGCACCATTTCTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCt < 1:683076/139‑1 (MQ=255)
tAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCt < 2:826061/139‑1 (MQ=255)
tAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCt < 2:773185/139‑1 (MQ=255)
tAAAATCAACCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCt > 1:1247538/1‑139 (MQ=255)
tAAAATCAACCGCCCAACACGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCt < 2:1209764/139‑1 (MQ=255)
aCCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACt < 2:1462098/54‑1 (MQ=255)
aCCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACt > 1:1462098/1‑54 (MQ=255)
aCCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACAt > 2:623306/1‑129 (MQ=255)
aCCGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACAt < 1:623306/129‑1 (MQ=255)
cGCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGa > 2:683076/1‑139 (MQ=255)
gCCCAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGAt < 2:1247538/139‑1 (MQ=255)
cccAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCAc < 1:94128/64‑1 (MQ=255)
cccAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCAc > 2:94128/1‑64 (MQ=255)
cccAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACAt < 2:1141518/125‑1 (MQ=255)
cccAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACAt > 1:1141518/1‑125 (MQ=255)
cAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATcgc > 1:1282263/1‑139 (MQ=255)
cAACGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATcgc > 1:792438/1‑139 (MQ=255)
aCGCGTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGa < 1:96665/139‑1 (MQ=255)
cgTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAAc < 2:1021601/139‑1 (MQ=255)
gTTGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACg < 1:607187/139‑1 (MQ=255)
tGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGa < 1:1011276/127‑1 (MQ=255)
tGGGCC‑GGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGa > 2:1011276/1‑127 (MQ=255)
|
TTGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACG > NC_000913/1004016‑1004285
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
