Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A1 F1 I1 R1 | 773 | 79.9 | 4112934 | 92.2% | 3792125 | 104.5 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,475,562 | (G)6→9 | coding (126/1815 nt) | yjgL → | SopA‑central‑domain‑like hexapeptide repeat protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4475556 | 1 (0.010) | 89 (1.110) +GGG |
55/188 | 0.1 | 98.9% | coding (120/1815 nt) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| ? | NC_000913 | 4475557 = | 1 (0.010) | coding (121/1815 nt) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein | |||||
TCACTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4475419‑4475556‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAG > NC_000913/4475557‑4475694 ||| TCACTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCG < 2:19136/139‑1 GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG < 1:257435/139‑1 TTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG > 1:1339640/1‑135 TTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG < 2:1339640/135‑1 CGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGAT > 1:430405/1‑139 TGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAG < 2:1264819/139‑1 CAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGG > 1:1341205/1‑139 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCA > 2:1141243/1‑139 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAA > 1:1063067/1‑111 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAA < 2:1063067/111‑1 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG < 2:596396/103‑1 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG > 1:596396/1‑103 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGG > 1:35712/1‑98 TTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGG < 2:35712/98‑1 AACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATT < 2:755883/119‑1 AACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATT > 1:755883/1‑119 AACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGG > 2:2041888/1‑93 AACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGG < 1:1190107/93‑1 AACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGG > 2:1190107/1‑93 AACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGG < 1:2041888/93‑1 AACACATTACAATAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAG < 2:1577932/109‑1 AACACATTACAATAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAG > 1:1577932/1‑109 TACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGG < 1:1414546/89‑1 TACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGG > 2:1414546/1‑89 TACATTAGCCGACAATTTTAAACAAAAAAGCGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTT > 2:1526730/1‑139 ACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG < 2:1440108/90‑1 ACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG > 1:1440108/1‑90 TAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGGATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCT > 1:1611392/1‑110 TAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGGATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCT < 2:1611392/110‑1 TAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGC > 1:1110947/1‑139 TAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCT < 2:1766930/109‑1 TAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCT > 1:1766930/1‑109 GCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAA > 1:1677528/1‑139 CCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAA > 1:1826129/1‑139 CCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAA < 2:1826129/139‑1 GACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTT < 2:450585/106‑1 GACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTT > 1:450585/1‑106 CAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG < 2:1507504/79‑1 CAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGG > 1:1507504/1‑79 AATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATAT < 1:2012236/139‑1 AATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGG > 1:155154/1‑71 AATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTCGCCCGTATTGCCGG < 2:155154/71‑1 TAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACC > 1:623185/1‑139 TAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGG > 1:628430/1‑72 TAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGG < 2:628430/72‑1 AAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACC < 2:1819029/132‑1 AAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACC > 1:1819029/1‑132 AATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCA < 2:1677528/139‑1 AATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAC < 2:2053906/116‑1 AATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAC > 1:2053906/1‑116 CTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAA > 1:1335468/1‑136 CTGGCGTGCTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAA < 2:1335468/136‑1 TGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCT < 2:623185/139‑1 TGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCT > 2:856310/1‑139 GGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTC > 2:1959773/1‑139 GGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTC > 2:856129/1‑139 GGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAA > 1:195160/1‑134 GGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAA < 2:195160/134‑1 GGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGA < 1:1778164/49‑1 GGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGA > 2:1778164/1‑49 GTTGGAATGAAT‑GATTTTGCCCGTATTGCTGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACG > 2:1063268/1‑131 GTTGGAATGAAT‑GATTTTGCCCGTATTGCTGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACG < 1:1063268/131‑1 GTTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACG < 1:856129/139‑1 TTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGG > 2:1342058/1‑42 TTGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGG < 1:1342058/42‑1 TGGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAA < 2:1110947/139‑1 GGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGA < 2:1883032/52‑1 GGAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGA > 1:1883032/1‑52 GAATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGC > 2:505758/1‑139 AATGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCG < 1:1141243/139‑1 TGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGG < 2:133569/139‑1 TGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAA > 1:820351/1‑88 TGAAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAA < 2:820351/88‑1 AAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAG < 2:182602/41‑1 AAT‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAG > 1:182602/1‑41 T‑GATTTTGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAG < 2:1144942/62‑1 TGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATG > 2:1395523/1‑139 TGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCT > 1:491242/1‑116 TGCCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCT < 2:491242/116‑1 CCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGT > 2:705295/1‑128 CCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGT < 1:705295/128‑1 CCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACG > 1:1209359/1‑112 CCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACG < 2:1209359/112‑1 CCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACC < 1:163514/86‑1 CCCGTATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACC > 2:163514/1‑86 TATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCT < 1:1959773/139‑1 TATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCT < 1:505758/139‑1 TATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAA > 2:282723/1‑72 TATTGCCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAA < 1:282723/72‑1 CCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATAT > 2:694621/1‑139 CCGGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAG‑TTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATT < 1:1526730/139‑1 GGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAG < 1:694621/139‑1 ||| TCACTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAAT‑GATTTTGCCCGTATTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4475419‑4475556‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAG > NC_000913/4475557‑4475694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |