Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F80 I1 R1 119 143.3 3427330 99.1% 3396484 212.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,686,880 T→C D765G (GAC→GGC)  bcsC ← cellulose biosynthesis protein BcsC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,686,8800TC100.0% 476.1 / NA 125D765G (GAC→GGC) bcsCcellulose biosynthesis protein BcsC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (66/59);  total (66/59)

Only 100 of 127 total aligned reads displayed.

ATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGTCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCCGCTGCGCTGCTGCGG  >  NC_000913/3686651‑3687114
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          
aTCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTtctc                                                                                                                                                                                                                                  <  1:482417/240‑1 (MQ=255)
  cGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCtcgt                                                                                                                                                                                                                                <  2:1396299/240‑1 (MQ=255)
  cGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCtcg                                                                                                                                                                                                                                 >  2:265885/1‑239 (MQ=255)
   ggCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCtcgt                                                                                                                                                                                                                                <  2:1441245/239‑1 (MQ=255)
               gaAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCa                                                                                                                                                                                                                    <  2:72316/239‑1 (MQ=255)
                aaaCTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAg                                                                                                                                                                                                                   <  1:1546367/239‑1 (MQ=255)
                          cGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAgg                                                                                                                                                                                                        <  1:1497393/240‑1 (MQ=255)
                          cGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAgg                                                                                                                                                                                                        <  1:1564347/240‑1 (MQ=255)
                            ttCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTa                                                                                                                                                                                                            <  2:444305/234‑1 (MQ=255)
                            ttCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGgt                                                                                                                                                                                                       >  2:1621607/1‑239 (MQ=255)
                                          aTCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGCGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGc                                                                                                                                                                                          >  1:753073/1‑238 (MQ=255)
                                                   aaaGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGcgtcg                                                                                                                                                                                <  2:1469216/239‑1 (MQ=255)
                                                           tCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGa                                                                                                                                                                                       <  2:1201461/224‑1 (MQ=255)
                                                           tCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCacac                                                                                                                                                                       >  1:1434177/1‑240 (MQ=255)
                                                            ccGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCacac                                                                                                                                                                       <  1:464441/239‑1 (MQ=255)
                                                                          aCGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGc                                                                                                                                                                                          >  2:1666795/1‑206 (MQ=255)
                                                                          aCGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATgg                                                                                                                                                        >  1:54071/1‑240 (MQ=255)
                                                                            ggCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTa                                                                                                                                                                                                                           >  1:496141/1‑171 (MQ=255)
                                                                             gcgcATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTa                                                                                                                                                                              <  1:1351080/215‑1 (MQ=255)
                                                                             gcgcATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTa                                                                                                                                                                              >  2:1351078/1‑215 (MQ=255)
                                                                             gcgcATCCACCTGCAACATGGTAGTGCGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGc                                                                                                                                                       <  2:116546/238‑1 (MQ=255)
                                                                              cgcATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGt                                                                                                                                                     >  1:632476/1‑239 (MQ=255)
                                                                                cATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCtt                                                                                                                                                  <  1:227790/240‑1 (MQ=255)
                                                                                cATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTAATGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTACCACCGGATGCGACCATGGCGTCtt                                                                                                                                                  >  1:701680/1‑240 (MQ=255)
                                                                                 aTCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGTGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCttt                                                                                                                                                 >  2:1300081/1‑240 (MQ=255)
                                                                                 aTCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCtcg                                                                                                                                                                                                                                 <  1:1454286/160‑1 (MQ=255)
                                                                                 aTCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCtcg                                                                                                                                                                                                                                 >  2:1454283/1‑160 (MQ=255)
                                                                                   ccACCTGCAACATTGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGAc                                                                                                                                                             <  1:1073552/226‑1 (MQ=255)
                                                                                             cATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAg                                                                                                                                     >  1:467155/1‑240 (MQ=255)
                                                                                               tGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgc                                                                                                                                    >  1:1098091/1‑239 (MQ=255)
                                                                                                ggTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGc                                                                                                                                                       <  2:217800/219‑1 (MQ=255)
                                                                                                ggTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgcgc                                                                                                                                  <  1:437926/240‑1 (MQ=255)
                                                                                                ggTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgcgc                                                                                                                                  <  1:299371/240‑1 (MQ=255)
                                                                                                ggTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgcgc                                                                                                                                  <  1:276061/240‑1 (MQ=255)
                                                                                                ggTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgcgc                                                                                                                                  >  1:170608/1‑240 (MQ=255)
                                                                                                ggTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTACGCCGCATCGATGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgcgc                                                                                                                                  <  1:1069871/240‑1 (MQ=255)
                                                                                                     tgtgCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGGCAGTCGGGTAAAGGTGTCGtt                                                                                                                                                                                                 >  2:344621/1‑172 (MQ=255)
                                                                                                       tgCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGtt                                                                                                                           >  2:1578789/1‑240 (MQ=255)
                                                                                                       tgCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGt                                                                                                                            >  2:89848/1‑239 (MQ=255)
                                                                                                       tgCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGt                                                                                                                            >  2:1566483/1‑239 (MQ=255)
                                                                                                         cgcTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTgg                                                                                                                         >  1:1707700/1‑240 (MQ=255)
                                                                                                         cgcTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTgg                                                                                                                         >  1:1662469/1‑240 (MQ=255)
                                                                                                            tttCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCacac                                                                                                                                                                       >  1:365381/1‑191 (MQ=255)
                                                                                                            tttCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCAGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATc                                                                                                                      >  1:727101/1‑240 (MQ=255)
                                                                                                             ttCAGATCGGAGTAACCTCCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCTGGTAAAGGTGTCGTTATCCTGCGGa                                                                                                                                                                                       <  2:432639/174‑1 (MQ=255)
                                                                                                                 gATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATcgccc                                                                                                                  >  1:1614753/1‑239 (MQ=255)
                                                                                                                      gAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGa                                                                                                                                                              >  2:1711175/1‑190 (MQ=255)
                                                                                                                      gAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTg                                                                                                             >  2:1613451/1‑239 (MQ=255)
                                                                                                                      gAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTg                                                                                                             >  2:1129847/1‑239 (MQ=255)
                                                                                                                            ccaccGGTGCCGCTCGAACCCCAGTAATCGTGCTCATGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCa                                                                                                      <  1:175876/240‑1 (MQ=255)
                                                                                                                            ccaccGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTc                                                                                                       <  1:22804/239‑1 (MQ=255)
                                                                                                                                 ggTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACt                                                                                                  >  2:1079987/1‑239 (MQ=255)
                                                                                                                                  gTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGAc                                                                                                                                                                                      <  2:683953/154‑1 (MQ=255)
                                                                                                                                   tGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTc                                                                                                >  1:1015751/1‑239 (MQ=255)
                                                                                                                                   tGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTc                                                                                                >  2:798939/1‑239 (MQ=255)
                                                                                                                                     ccGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGc                                                                                              >  2:505482/1‑239 (MQ=255)
                                                                                                                                        cTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAgg                                                                                                                                                                                                        >  1:1268922/1‑130 (MQ=255)
                                                                                                                                        cTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCAcc                                                                                           >  1:124495/1‑239 (MQ=255)
                                                                                                                                        cTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCa                                                                                          <  1:892172/240‑1 (MQ=255)
                                                                                                                                        cTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCa                                                                                          <  2:1426881/240‑1 (MQ=255)
                                                                                                                                         tCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCa                                                                                          <  2:323185/239‑1 (MQ=255)
                                                                                                                                                       tCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCggg                                                                                                                                                                                                              <  2:1118257/109‑1 (MQ=255)
                                                                                                                                                       tCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCggg                                                                                                                                                                                                              >  1:1118258/1‑109 (MQ=255)
                                                                                                                                                                    tGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATc                                                               >  1:1466296/1‑239 (MQ=255)
                                                                                                                                                                      aCGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGAc                                                            >  1:400908/1‑240 (MQ=255)
                                                                                                                                                                       cGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGAc                                                            >  1:236567/1‑239 (MQ=255)
                                                                                                                                                                       cGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGAc                                                            >  1:676826/1‑239 (MQ=255)
                                                                                                                                                                       cGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACg                                                           <  2:676825/240‑1 (MQ=255)
                                                                                                                                                                         ttAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACgg                                                          >  2:334119/1‑239 (MQ=255)
                                                                                                                                                                            aGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGc                                                      >  1:291425/1‑240 (MQ=255)
                                                                                                                                                                                ccTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTgag                                                  >  1:648290/1‑240 (MQ=255)
                                                                                                                                                                                ccTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTga                                                   >  1:1439079/1‑239 (MQ=255)
                                                                                                                                                                                 ctgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAg                                                                                                                                                                                                                   <  1:48604/78‑1 (MQ=255)
                                                                                                                                                                                 ctgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAg                                                                                                                                                                                                                   >  2:48604/1‑78 (MQ=255)
                                                                                                                                                                                  tgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGcgtcg                                                                                                                                                                                <  1:1593653/112‑1 (MQ=255)
                                                                                                                                                                                  tgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGcgtcg                                                                                                                                                                                >  2:1593650/1‑112 (MQ=255)
                                                                                                                                                                                  tgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATg                                                                                                                                                                 <  1:128152/127‑1 (MQ=255)
                                                                                                                                                                                  tgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATg                                                                                                                                                                 >  2:128152/1‑127 (MQ=255)
                                                                                                                                                                                  tgctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGAt                                                >  1:1322497/1‑240 (MQ=255)
                                                                                                                                                                                   gctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATg                                                                                                                                                                 <  2:490948/126‑1 (MQ=255)
                                                                                                                                                                                   gctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGAtt                                               >  2:1379065/1‑240 (MQ=255)
                                                                                                                                                                                   gctgGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTATCTCGTCGTTACGGGTCAGTCGGCTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGAGACTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGTAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGAtt                                               >  2:490028/1‑240 (MQ=255)
                                                                                                                                                                                      ggCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATcgcg                                                                        <  1:564793/212‑1 (MQ=255)
                                                                                                                                                                                            agagGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTg                                                                                                             <  2:12856/169‑1 (MQ=255)
                                                                                                                                                                                               ggTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGGCTTTGTAGGTTTCCAGCGCCt                                                                                                                                >  2:1260745/1‑147 (MQ=255)
                                                                                                                                                                                                 tCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGAt                                  <  2:632475/239‑1 (MQ=255)
                                                                                                                                                                                                  ccgccgCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATc                                 <  1:265885/239‑1 (MQ=255)
                                                                                                                                                                                                  ccgccgCATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATc                                 <  1:852437/239‑1 (MQ=255)
                                                                                                                                                                                                   cgccgcATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCaa                               <  1:1379067/240‑1 (MQ=255)
                                                                                                                                                                                                        cATCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTTGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAgcgc                                                                                                                                  <  2:144649/136‑1 (MQ=255)
                                                                                                                                                                                                          tCGCTGCGCACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACttatt                         >  2:933029/1‑239 (MQ=255)
                                                                                                                                                                                                                cgcACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGt                   >  1:1521356/1‑239 (MQ=255)
                                                                                                                                                                                                                 gcACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTc                  <  1:1482406/239‑1 (MQ=255)
                                                                                                                                                                                                                  cACGCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCcg                <  1:4787/240‑1 (MQ=255)
                                                                                                                                                                                                                     gCCACGTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCcgct              >  2:39606/1‑239 (MQ=255)
                                                                                                                                                                                                                          gTTTCAGCCAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCcgctgcgct         >  2:1584904/1‑239 (MQ=255)
                                                                                                                                                                                                                               agccagccATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCCGCTGCGCtgctgc    >  1:391241/1‑239 (MQ=255)
                                                                                                                                                                                                                                 ccAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCCGCTGCGCTGCTGCgg  >  2:232349/1‑239 (MQ=255)
                                                                                                                                                                                                                                 ccAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCCGCTGCGCTGCTGCgg  <  1:1351741/239‑1 (MQ=255)
                                                                                                                                                                                                                                 ccAGCCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCCGCTGCGCTGCTGCgg  <  2:1393377/239‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          
ATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACCACCGGTGCCGCTCGAACCCCAGTAATCGTGCTCAAGGGTGACGTTAAGATCCTGCTGGCGATAGAGGTCCGCCGCATCGCTGCGCACGCCACGTTTCAGCCAGTCATCTTTCTCGTCGTTACGGGTCAGTCGGGTAAAGGTGTCGTTATCCTGCGGACGCGTCGTAGTCACACCGGATGCGACCATGGCGTCTTTGTAGGTTTCCAGCGCCTGCGTTGGATCGCCCGCCTGCGCTTCAAACTTCGCACCATCACGCAGCACCATCGCGCTTTCCATCGACGGTGGCTGAGATTTTGCCTGCGGGATCAACTTATTAAACGTCCGCTGCGCTGCTGCGG  >  NC_000913/3686651‑3687114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A