Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F80 I1 R1 119 143.3 3427330 99.1% 3396484 212.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,957,219 A→G V201A (GTA→GCA)  ilvY ← DNA‑binding transcriptional dual regulator IlvY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,957,2190AG100.0% 418.6 / NA 114V201A (GTA→GCA) ilvYDNA‑binding transcriptional dual regulator IlvY
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (57/57);  total (57/57)

Only 100 of 114 total aligned reads displayed.

TTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTACCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGT  >  NC_000913/3956985‑3957452
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         
tttttCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGc                                                                                                                                                                                                                                      >  1:947866/1‑240 (MQ=255)
tttttCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGc                                                                                                                                                                                                                                      >  1:367356/1‑240 (MQ=255)
          cacacaCGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCgg                                                                                                                                                                                                                            <  1:228104/240‑1 (MQ=255)
                cGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCata                                                                                                                                                                                                                       <  2:1190950/239‑1 (MQ=255)
                  cccAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCataata                                                                                                                                                                                                                    >  1:1099383/1‑240 (MQ=255)
                       cTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACgg                                                                                                                                                                                                               <  1:717343/240‑1 (MQ=255)
                          aaaCGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGc                                                                                                                                                                                                                                      <  2:1241011/214‑1 (MQ=255)
                                  ttttCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGAcc                                                                                                                                                                                                    <  2:686262/240‑1 (MQ=255)
                                  ttttCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGAc                                                                                                                                                                                                     <  1:652471/239‑1 (MQ=255)
                                               gcgcTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTtct                                                                                                                                                                                        <  1:1461094/239‑1 (MQ=255)
                                                     tAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCg                                                                                                                                                                                  >  2:735549/1‑239 (MQ=255)
                                                         atcatcACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACgg                                                                                                                                                                                                               <  2:236323/206‑1 (MQ=255)
                                                          tcatcaCGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACAcc                                                                                                                                                                             <  1:1483692/239‑1 (MQ=255)
                                                          tcatcaCGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACAcc                                                                                                                                                                             <  1:343847/239‑1 (MQ=255)
                                                          tcatcaCGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACAcc                                                                                                                                                                             <  1:641480/239‑1 (MQ=255)
                                                             tcaCGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACAccctg                                                                                                                                                                          >  1:69124/1‑236 (MQ=255)
                                                              caCGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTtct                                                                                                                                                                                        <  2:69124/224‑1 (MQ=255)
                                                                  cgGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGc                                                                                                                                                                    >  1:467655/1‑240 (MQ=255)
                                                                   ggTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCa                                                                                                                                                                   <  1:1421543/240‑1 (MQ=255)
                                                                   ggTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCa                                                                                                                                                                   <  1:263975/240‑1 (MQ=255)
                                                                   ggTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCa                                                                                                                                                                   <  2:1623403/240‑1 (MQ=255)
                                                                           aCCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCgggcag                                                                                                                                                           >  1:1289151/1‑240 (MQ=255)
                                                                               gTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCata                                                                                                                                                                                                                       >  2:808480/1‑176 (MQ=255)
                                                                               gTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGac                                                                                                                                                                                >  2:1618187/1‑215 (MQ=255)
                                                                               gTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCgggcagggc                                                                                                                                                        >  2:959724/1‑239 (MQ=255)
                                                                                       cTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCgggcag                                                                                                                                                           >  2:1539527/1‑228 (MQ=255)
                                                                                        tGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCgggg                                                                                                                                               <  2:17898/239‑1 (MQ=255)
                                                                                        tGTTTTCCAGCACCACTTCCGGCAACAATGACACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCgggg                                                                                                                                               <  1:1107382/239‑1 (MQ=255)
                                                                                          ttttCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAGCCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAAc                                                                                                                                                                                                                 >  1:1503475/1‑171 (MQ=255)
                                                                                          ttttCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCCGGGCAGCGCGGGGGc                                                                                                                                             >  1:104350/1‑239 (MQ=255)
                                                                                          ttttCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCa                                                                                                                                            <  2:1074059/240‑1 (MQ=255)
                                                                                          ttttCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCa                                                                                                                                            <  2:1576411/240‑1 (MQ=255)
                                                                                           tttCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCa                                                                                                                                            <  2:414297/239‑1 (MQ=255)
                                                                                               cAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAg                                                                                                                                       <  1:1636399/240‑1 (MQ=255)
                                                                                                aGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCgggg                                                                                                                                               <  2:443238/231‑1 (MQ=255)
                                                                                                 gCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCa                                                                                                                                        >  2:753707/1‑237 (MQ=255)
                                                                                                    ccacTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCgggg                                                                                                                                               >  2:1011386/1‑227 (MQ=255)
                                                                                                    ccacTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCgggg                                                                                                                                               <  1:1011387/227‑1 (MQ=255)
                                                                                                       cTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCactact                                                                                                                                >  2:1345131/1‑239 (MQ=255)
                                                                                                       cTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCactact                                                                                                                                >  1:919886/1‑239 (MQ=255)
                                                                                                       cTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCactact                                                                                                                                >  1:1002299/1‑239 (MQ=255)
                                                                                                                 caaTGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATtctc                                                                                                                     >  1:219362/1‑240 (MQ=255)
                                                                                                                    tGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCa                                                                                                                   >  1:1405369/1‑239 (MQ=255)
                                                                                                                      ccacgccacAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGc                                                                                                                 >  1:69126/1‑239 (MQ=255)
                                                                                                                         cgccacAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGTCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCgg                                                                                                                                                                                             <  1:956674/160‑1 (MQ=255)
                                                                                                                           ccacAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTNTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGaa                                                                                                           <  2:1114613/240‑1 (MQ=255)
                                                                                                                            cacaGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACAGATTTTATTGCGTCGACACCACAGTTCAATGCGGCGGCGTGTCGGCCCCTGATCGGCCatactta                                                                                                                                                                                                                   >  2:1522451/1‑131 (MQ=255)
                                                                                                                              caGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGaaaa                                                                                                         <  2:1102002/239‑1 (MQ=255)
                                                                                                                                    aGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCAc                                                                                                   >  1:701065/1‑239 (MQ=255)
                                                                                                                                    aGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCAc                                                                                                   >  1:1325293/1‑239 (MQ=255)
                                                                                                                                         caccaTCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGcc                                                                                             >  1:902058/1‑240 (MQ=255)
                                                                                                                                           ccaTCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGcc                                                                                                                             <  2:210867/206‑1 (MQ=255)
                                                                                                                                              tCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCTGCGTGCCGGCCCCTGATCGGCCATAATGAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGAtt                                                                                                                                                                        <  1:1223152/160‑1 (MQ=255)
                                                                                                                                              tCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGc                                                                                         >  1:1200470/1‑239 (MQ=255)
                                                                                                                                              tCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGc                                                                                         >  2:1710454/1‑239 (MQ=255)
                                                                                                                                               cGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCa                                                                                        <  2:1202524/239‑1 (MQ=255)
                                                                                                                                                gATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACt                                                                                                  >  1:1035807/1‑228 (MQ=255)
                                                                                                                                                   aCCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGtt                                                                                   >  2:978490/1‑240 (MQ=255)
                                                                                                                                                     cATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAg                                                                                                                                                                                                  >  1:1332032/1‑127 (MQ=255)
                                                                                                                                                     cATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGa                                                                                                                          <  2:1011125/199‑1 (MQ=255)
                                                                                                                                                        cGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCgg                                                                              >  1:1226334/1‑240 (MQ=255)
                                                                                                                                                               tGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGt                                                                             >  1:212216/1‑234 (MQ=255)
                                                                                                                                                                gCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCg                                                                      <  1:1345133/240‑1 (MQ=255)
                                                                                                                                                                  ccGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCa                                                                    <  1:735550/240‑1 (MQ=255)
                                                                                                                                                                   cGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCaa                                                                   >  1:280791/1‑240 (MQ=255)
                                                                                                                                                                     ccAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAAt                                                                  <  2:1160143/239‑1 (MQ=255)
                                                                                                                                                                     ccAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAAt                                                                  >  1:891958/1‑239 (MQ=255)
                                                                                                                                                                           gTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGa                                                           <  2:1143303/240‑1 (MQ=255)
                                                                                                                                                                            tGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGa                                                           >  2:845199/1‑239 (MQ=255)
                                                                                                                                                                            tGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGCCGTGCCGGCCCCTAATCgg                                                                                                                                                                                                                            >  2:839563/1‑78 (MQ=255)
                                                                                                                                                                                gTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGc                                                      <  1:306809/240‑1 (MQ=255)
                                                                                                                                                                                 tAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGc                                                      >  2:883518/1‑239 (MQ=255)
                                                                                                                                                                                  aaaTCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCt                                                     <  1:192622/239‑1 (MQ=255)
                                                                                                                                                                                     tcatcGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCa                                                  <  2:1325291/239‑1 (MQ=255)
                                                                                                                                                                                         cGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAAt                                                                                                                                          <  2:105799/147‑1 (MQ=255)
                                                                                                                                                                                         cGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAAt                                                                                                                                          >  1:105799/1‑147 (MQ=255)
                                                                                                                                                                                         cGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAg                                              >  1:229828/1‑239 (MQ=255)
                                                                                                                                                                                               aCTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTgcgc                                                                                              >  1:839483/1‑185 (MQ=255)
                                                                                                                                                                                                        aTTGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCt                                                     <  1:1708260/217‑1 (MQ=255)
                                                                                                                                                                                                         ttGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCAt                              <  1:978491/239‑1 (MQ=255)
                                                                                                                                                                                                          tGCGTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATc                             >  1:4067/1‑239 (MQ=255)
                                                                                                                                                                                                             gTCGAAACCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCa                          >  1:1458607/1‑239 (MQ=255)
                                                                                                                                                                                                                  aaCCACAGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTATCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCa                                               >  1:524849/1‑213 (MQ=255)
                                                                                                                                                                                                                      acaGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCAt                <  1:794700/240‑1 (MQ=255)
                                                                                                                                                                                                                      acaGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCAt                <  1:738402/240‑1 (MQ=255)
                                                                                                                                                                                                                       caGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCAt                <  1:997324/239‑1 (MQ=255)
                                                                                                                                                                                                                       caGTTCAAGGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCAt                <  2:219362/239‑1 (MQ=255)
                                                                                                                                                                                                                        aGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCTATCGCATCTGCCGCa                 >  2:344828/1‑237 (MQ=255)
                                                                                                                                                                                                                        aGTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCa              >  1:1467327/1‑240 (MQ=255)
                                                                                                                                                                                                                         gTTCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc             <  1:1533326/240‑1 (MQ=255)
                                                                                                                                                                                                                          ttCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc             <  2:503998/239‑1 (MQ=255)
                                                                                                                                                                                                                          ttCAATGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc             <  1:1710458/239‑1 (MQ=255)
                                                                                                                                                                                                                               tGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCagtag       >  1:1035947/1‑240 (MQ=255)
                                                                                                                                                                                                                               tGCGGCGGCGTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACACGCAATCGCCAGATCCGCTCCACCAGTCACCACCTTTTCCATc                             >  2:710051/1‑218 (MQ=255)
                                                                                                                                                                                                                                  ggcggcgTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCa                                                                                                                                                                   <  2:840039/81‑1 (MQ=255)
                                                                                                                                                                                                                                  ggcggcgTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCa                                                                                                                                                                   >  1:840040/1‑81 (MQ=255)
                                                                                                                                                                                                                                    cggcgTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGcc                                                                                                                             <  1:1455543/117‑1 (MQ=255)
                                                                                                                                                                                                                                    cggcgTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCa                                                                    <  2:316416/174‑1 (MQ=255)
                                                                                                                                                                                                                                    cggcgTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGt  >  1:1454002/1‑240 (MQ=255)
                                                                                                                                                                                                                                     ggcgTGCCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGt  <  2:947865/239‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         
TTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTTTCCAGCACCACTTCCGGCAACAATGCCACGCCACAGCCGAGTGCCACCATCGATACCATCGCTTCATGCCCGCCAACCGTGGCGTAAATCATCGGGTTACTGATTTTATTGCGTCGAAACCACAGTTCAATGCGGCGGCGTACCGGCCCCTGATCGGCCATAATAAACGGCACCGTTGACCAGTCCGGCTTCTCTACCGACACCTGATTACGCACCGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGT  >  NC_000913/3956985‑3957452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A