Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F80 I1 R1 119 143.3 3427330 99.1% 3396484 212.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,302,471 T→C D203G (GAC→GGC)  mdtO ← putative multidrug efflux pump subunit MdtO

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,302,4710TC98.6% 526.6 / ‑6.4 139D203G (GAC→GGC) mdtOputative multidrug efflux pump subunit MdtO
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (47/90);  minor base G (1/1);  total (48/91)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 142 total aligned reads displayed.

TGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGTCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAGCGACAATGGCGACGGCGAAAAAGACCAGCCC  >  NC_000913/4302235‑4302703
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                        
tgttgATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGctgcctg                                                                                                                                                                                                                                       >  1:1686815/1‑240 (MQ=255)
  ttgATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGctgcctgt                                                                                                                                                                                                                                      <  1:1432532/239‑1 (MQ=255)
      tttCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGt                                                                                                                                                                                                                                 <  2:99160/240‑1 (MQ=255)
      tttCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGt                                                                                                                                                                                                                                 <  1:1701894/240‑1 (MQ=255)
       ttCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGt                                                                                                                                                                                                                                 >  1:1524399/1‑239 (MQ=255)
        tCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGa                                                                                                                                                                                                                               >  2:1324668/1‑240 (MQ=255)
           gAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTa                                                                                                                                                                                                                            <  1:306736/240‑1 (MQ=255)
               cTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATgg                                                                                                                                                                                                                        <  1:1060267/240‑1 (MQ=255)
                tAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATgg                                                                                                                                                                                                                        <  1:1327831/239‑1 (MQ=255)
                    ttttGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGcatca                                                                                                                                                                                                                   <  1:1292658/240‑1 (MQ=255)
                      ttGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCatcatc                                                                                                                                                                                                                 <  1:470675/240‑1 (MQ=255)
                         tCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGGCTGTCAGGTGACTAATGGc                                                                                                                                                                                                                       >  2:1658014/1‑231 (MQ=255)
                                   ataatTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTa                                                                                                                                                                                                    <  1:1156084/240‑1 (MQ=255)
                                         gCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTATGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGcc                                                                                                                                                                                              >  1:704399/1‑240 (MQ=255)
                                          ccTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTa                                                                                                                                                                                                    <  1:342802/233‑1 (MQ=255)
                                          ccTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTa                                                                                                                                                                                                    >  2:342802/1‑233 (MQ=255)
                                                    aGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTg                                                                                                                                                                                                                                >  2:1013842/1‑195 (MQ=255)
                                                          agagGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCg                                                                                                                                                                                 >  2:442416/1‑236 (MQ=255)
                                                                   aTCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGc                                                                                                                                                                                                                       <  2:775042/189‑1 (MQ=255)
                                                                   aTCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCg                                                                                                                                                                                 >  1:1457697/1‑227 (MQ=255)
                                                                   aTCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGAc                                                                                                                                                                     <  2:935175/239‑1 (MQ=255)
                                                                     cGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTgg                                                                                                                                                                  <  2:973269/240‑1 (MQ=255)
                                                                        aGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGa                                                                                                                                                                <  2:894007/239‑1 (MQ=255)
                                                                         gCGATTCAGCGTCGAGTAAATGTAGGTTACCGTGGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGa                                                                                                                                                                <  1:425267/238‑1 (MQ=255)
                                                                           gATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAAc                                                                                                                                                             <  2:1512403/239‑1 (MQ=255)
                                                                             ttCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACca                                                                                                                                                           >  2:1054828/1‑239 (MQ=255)
                                                                              tCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACcac                                                                                                                                                          >  2:1637362/1‑239 (MQ=255)
                                                                                  cGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACGGCa                                                                                                                                                      >  2:502750/1‑239 (MQ=255)
                                                                                       aGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGa                                                                                                                                                >  1:1116563/1‑240 (MQ=255)
                                                                                       aGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGa                                                                                                                                                >  1:555437/1‑240 (MQ=255)
                                                                                            aTGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAAc                                                                                                                                           <  1:1158249/240‑1 (MQ=255)
                                                                                              gTAGGTTCCCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACg                                                                                                                                                                       <  2:584551/210‑1 (MQ=255)
                                                                                                 ggTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATgg                                                                                                                                                                                                                        >  1:882369/1‑158 (MQ=255)
                                                                                                 ggTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACg                                                                                                                                                    <  1:1499846/226‑1 (MQ=255)
                                                                                                 ggTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGtcat                                                                                                                                      >  1:616216/1‑240 (MQ=255)
                                                                                                 ggTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGtca                                                                                                                                       >  1:919299/1‑239 (MQ=255)
                                                                                                    tACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCAc                                                                                                                                                     <  2:429089/222‑1 (MQ=255)
                                                                                                      ccGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCa                                                                                                                                 <  2:919298/240‑1 (MQ=255)
                                                                                                      ccGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCa                                                                                                                                 <  1:1463025/240‑1 (MQ=255)
                                                                                                      ccGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAACGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCa                                                                                                                                 <  1:894051/240‑1 (MQ=255)
                                                                                                       cGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAgg                                                                                                                                                                                                                                  >  1:949131/1‑142 (MQ=255)
                                                                                                         ttGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAgg                                                                                                                              <  1:788558/240‑1 (MQ=255)
                                                                                                              aCGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATgg                                                                                                                                                                           <  2:221317/190‑1 (MQ=255)
                                                                                                                  aGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGt                                                                                                                             <  2:856438/232‑1 (MQ=255)
                                                                                                                    cTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAgg                                                                                                                   >  1:504088/1‑240 (MQ=255)
                                                                                                                      ttGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGcc                                                                                                                 <  2:71959/240‑1 (MQ=255)
                                                                                                                        gcaaccaTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATgg                                                                                                                                                                           <  2:958403/177‑1 (MQ=255)
                                                                                                                         ccaccaTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaac                                                                                                              <  1:219884/240‑1 (MQ=255)
                                                                                                                         ccaccaTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaa                                                                                                               <  2:616215/239‑1 (MQ=255)
                                                                                                                          caccaTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaa                                                                                                               <  2:53883/238‑1 (MQ=255)
                                                                                                                            ccaTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCg                                                                                                                                                 >  1:72902/1‑202 (MQ=255)
                                                                                                                             caTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaacaa                                                                                                            <  2:67572/238‑1 (MQ=255)
                                                                                                                              aTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCCGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGc                                                                                                                                                                          >  2:1544851/1‑175 (MQ=255)
                                                                                                                              aTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAACTGGCACGACTgg                                                                                                                                                                  >  1:1400251/1‑183 (MQ=255)
                                                                                                                              aTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACg                                                                                                          >  2:421970/1‑239 (MQ=255)
                                                                                                                              aTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACg                                                                                                          <  1:1605934/239‑1 (MQ=255)
                                                                                                                              aTGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCACTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGAt                                                                                                                        >  2:669827/1‑225 (MQ=255)
                                                                                                                               tGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGAt                                                                                                        <  1:1229508/240‑1 (MQ=255)
                                                                                                                                  gTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGAc                                                                                                                                                                     <  2:753713/176‑1 (MQ=255)
                                                                                                                                      tGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATAcaccac                                                                                                 <  1:1244288/240‑1 (MQ=255)
                                                                                                                                           tcaccAGTTGGCATCGTCCGCGAGGCAAATGTCATTGAGTTTTAGTAGCGCCAGCGCCTCTCTTTCTATCCGCGATCCGGGTAGTGGTGCGAGGCTGCCTGTCAGCTGACTAATGGCATCATCAAGCCGTTCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCAc                                                                                                                                                     <  2:714017/180‑1 (MQ=255)
                                                                                                                                           tCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCg                                                                                             >  1:1452935/1‑239 (MQ=255)
                                                                                                                                           tCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGt                                                                                            >  1:986555/1‑240 (MQ=255)
                                                                                                                                           tCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGt                                                                                            >  1:1080771/1‑240 (MQ=255)
                                                                                                                                            cGCCAGTTGGCATCGTCCGCGCGGCAAAAGACATTGTGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCAttt                                                                                                                                                                                    >  2:1445288/1‑151 (MQ=255)
                                                                                                                                            cGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaacaa                                                                                                            <  2:1454541/223‑1 (MQ=255)
                                                                                                                                             gCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGtt                                                                                           <  2:545946/239‑1 (MQ=255)
                                                                                                                                             gCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTa                                                                                          <  1:1182225/240‑1 (MQ=255)
                                                                                                                                              ccAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaacaa                                                                                                            <  1:274758/221‑1 (MQ=255)
                                                                                                                                                aGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAg                                                                                        <  1:678803/239‑1 (MQ=255)
                                                                                                                                                       aTCGTCCGCGAGGCAGAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGAc                                                                                <  2:1231304/240‑1 (MQ=255)
                                                                                                                                                       aTCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGa                                                                                 <  1:252411/239‑1 (MQ=255)
                                                                                                                                                       aTCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGAc                                                                                <  2:778780/240‑1 (MQ=255)
                                                                                                                                                       aTCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGAc                                                                                <  1:778796/240‑1 (MQ=255)
                                                                                                                                                        tCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGAc                                                                                <  2:1623925/239‑1 (MQ=255)
                                                                                                                                                                    cAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAg                                                                   >  1:1501973/1‑240 (MQ=255)
                                                                                                                                                                         gACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAg                                                              <  1:502097/240‑1 (MQ=255)
                                                                                                                                                                          aCATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGa                                                                                                                         <  2:1574596/180‑1 (MQ=255)
                                                                                                                                                                            aTTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCa                                                            >  2:849701/1‑239 (MQ=255)
                                                                                                                                                                            aTTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCAt                                                           >  1:1651873/1‑240 (MQ=255)
                                                                                                                                                                             ttGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATg                                                          <  1:447558/240‑1 (MQ=255)
                                                                                                                                                                              tGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCAc                                                                                                                                                                        <  2:394070/129‑1 (MQ=255)
                                                                                                                                                                              tGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATgg                                                         >  1:778480/1‑240 (MQ=255)
                                                                                                                                                                                          gcgccagcgccTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAgg                                                                                                                              <  2:19035/159‑1 (MQ=255)
                                                                                                                                                                                          gcgccagcgccTATCATTAAATCCACGTTTCGGGTAGCGTTGCGAGGCTGGCATTCAGCTGACTAATGGCATCATCAAGCCGATCATTAAg                                                                                                                                                                                                  <  2:986721/91‑1 (MQ=255)
                                                                                                                                                                                             ccagcgccTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGa                                                                      <  2:1000981/212‑1 (MQ=255)
                                                                                                                                                                                                 cgccTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTa                                      >  1:290999/1‑240 (MQ=255)
                                                                                                                                                                                                      ctctTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAg                                 <  2:1195561/240‑1 (MQ=255)
                                                                                                                                                                                                       tctTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGAc                                                                                <  2:1281151/192‑1 (MQ=255)
                                                                                                                                                                                                            cAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGa                                                                      <  2:137440/197‑1 (MQ=255)
                                                                                                                                                                                                              aTCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTa                                                                                                                                                                                                                            >  2:1419865/1‑45 (MQ=255)
                                                                                                                                                                                                              aTCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTa                                                                                                                                                                                                                            <  1:1419867/45‑1 (MQ=255)
                                                                                                                                                                                                              aTCCGCGTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAgg                                                >  2:1110358/1‑217 (MQ=255)
                                                                                                                                                                                                                   cgTTTCGGGTAGCGGTGCGAGGCTGCCTGTCAGGTGAATAATGGCATCATCAAGCCGATCATTa                                                                                                                                                                                                    <  2:551476/64‑1 (MQ=255)
                                                                                                                                                                                                                          ggTAGCGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGAc                                                                                <  2:1025826/173‑1 (MQ=255)
                                                                                                                                                                                                                               cGGTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCcaacaa                                                                                                            <  1:642199/140‑1 (MQ=255)
                                                                                                                                                                                                                                ggTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCGCGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAGCGACAATGGCGACGGCGAAAAAGAc        <  1:549458/239‑1 (MQ=255)
                                                                                                                                                                                                                                ggTGCGAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAGCGACAATGGCGACGGCGAAAAAGAc        <  1:391702/239‑1 (MQ=255)
                                                                                                                                                                                                                                     gAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAGCGACAATGGCGACGGCGAAAAAGACCAGccc  <  1:1369826/240‑1 (MQ=255)
                                                                                                                                                                                                                                     gAGGCTGCCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAGCGACAATGGCGACGGCGAAAAAGACCAGccc  <  2:290845/240‑1 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                        
TGTTGATTTCTGAAGCTAATTTTTGTCGGAATTCAATAATTGCCTGAGAATCAGCAAAAGAGGTGGGATCGTAGCGATTCAGCGTCGAGTAAATGTAGGTTACCGTTGCCACGCAGCTTTGCCACCATGCGTTTTGAGTTCGCCAGTTGGCATCGTCCGCGAGGCAAAAGACATTGAGTTTTTGTAGCGCCAGCGCCTCTCTTTCAATCCGCGTTTCGGGTAGCGGTGCGAGGCTGTCTGTCAGGTGACTAATGGCATCATCAAGCCGATCATTAAGCGCCTGATGCATTTGCGAAATGGCACGACTGGGAAACCACAGCACGCCGATTAACGTCATCAGCAAGGTTGGATAGAGGCCAACAACGATACACCACAGCGTTAAGCGCACGACCACTTCCGGATAGTCGAGCATGGCGGGGAAGGTTTGCCCGTAAATAGCGACAATGGCGACGGCGAAAAAGACCAGCCC  >  NC_000913/4302235‑4302703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A