Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F80 I1 R1
|
130 |
60.2 |
1467357 |
98.1% |
1439477 |
216.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,679,079 |
A→G |
S97P (TCT→CCT) |
yphF ← |
putative ABC transporter periplasmic binding protein YphF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,679,079 | 0 | A | G | 100.0%
| 164.0
/ NA
| 45 | S97P (TCT→CCT) | yphF | putative ABC transporter periplasmic binding protein YphF |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (20/25); total (20/25) |
AAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTGCGCTAC > NC_000913/2678845‑2679312
|
aaaCTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTg > 1:671500/1‑240 (MQ=255)
tCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGa > 2:66282/1‑239 (MQ=255)
cAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATa > 1:511199/1‑240 (MQ=255)
tCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATg > 1:661661/1‑240 (MQ=255)
atgaCGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGa > 2:535068/1‑238 (MQ=255)
ggCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTAc > 2:436202/1‑239 (MQ=255)
cAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATca > 1:103668/1‑239 (MQ=255)
aaaataaTCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTActttcttt < 1:478342/240‑1 (MQ=255)
tCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAata > 1:240587/1‑240 (MQ=255)
ggCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCAcc < 2:421935/240‑1 (MQ=255)
ggCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCAcc < 2:616454/240‑1 (MQ=255)
ccAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc < 2:598693/240‑1 (MQ=255)
ccAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc < 2:661650/240‑1 (MQ=255)
cAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc < 1:535077/239‑1 (MQ=255)
ttCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAAc < 2:516262/240‑1 (MQ=255)
aTCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTCACTGAACTTGTACt > 2:276660/1‑238 (MQ=255)
cGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTAcg < 2:348463/157‑1 (MQ=255)
aTACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTg > 1:29402/1‑239 (MQ=255)
tACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGcc < 1:160783/240‑1 (MQ=255)
cGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGcc < 2:354417/238‑1 (MQ=255)
cATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGaa < 2:431870/240‑1 (MQ=255)
atatTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGaa < 2:121384/239‑1 (MQ=255)
atTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGc > 1:517439/1‑240 (MQ=255)
aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGc > 2:632575/1‑240 (MQ=255)
aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGc > 2:612843/1‑240 (MQ=255)
cccccTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGc > 2:484863/1‑239 (MQ=255)
ttAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCgta < 1:174164/239‑1 (MQ=255)
aaTACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGCTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGaa < 2:68532/215‑1 (MQ=255)
tACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATc > 1:492950/1‑240 (MQ=255)
gtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTAt > 1:13412/1‑239 (MQ=255)
tAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATc < 2:349905/239‑1 (MQ=255)
cAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACTGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAg < 2:473137/239‑1 (MQ=255)
cAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCTTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTa < 2:563381/234‑1 (MQ=255)
aaTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTgcg > 2:729622/1‑141 (MQ=255)
ccGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATAtt > 2:96676/1‑239 (MQ=255)
cGGACTGCCCGCTCCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATTGACATTACGCGCCACGAGGGTATCAACAAAg < 2:576899/109‑1 (MQ=255)
gCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTa < 2:81923/220‑1 (MQ=255)
cccGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCa > 1:580133/1‑237 (MQ=255)
cTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACg < 2:533933/190‑1 (MQ=255)
acgaACGGTACGGCTACTGCCATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCg < 2:199731/239‑1 (MQ=255)
ccATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTgcg < 2:38819/240‑1 (MQ=255)
ccATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTgcg < 2:312047/240‑1 (MQ=255)
ccATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTgcg < 2:292003/240‑1 (MQ=255)
ccATTTTCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTgcg < 1:204513/240‑1 (MQ=255)
tttCAGGCACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTGCGCTAc > 1:644711/1‑240 (MQ=255)
|
AAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAATAAAATAATCAGCGGCAGCGTTACCCAGTTTTTTACCAAATTCCAGCGGATCGCCGACCAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAGCGTAGTATCCCTGAGTATCAAGGTATATTGCGCCAATGGTCATTTCTTTTTCCGCAGCCCTGGCAAATAGTGCGCTAC > NC_000913/2678845‑2679312
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
