Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A18 F60 I1 R1	12	125.7	4217070	98.9%	4170682	139.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	4,522,032	IS5 (+) +4 bp	intergenic (‑12/+92)	yjhF ← / ← yjhG	KpLE2 phage‑like element; putative transporter YjhF/KpLE2 phage‑like element; D‑xylonate dehydratase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2290113	NA (NA)	123 (0.990)	71/278	0.3	100%	noncoding (1/1195 nt)	IS5	repeat region
*	?	NC_000913	= 4522035	0 (0.000)	123 (0.990)	71/278	0.3	100%	intergenic (‑15/+92)	yjhF/yjhG	KpLE2 phage‑like element; putative transporter YjhF/KpLE2 phage‑like element; D‑xylonate dehydratase
*	?	NC_000913	3652036 =	NA (NA)	98 (0.790)	55/276	0.7	100%	noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	4522032 =	0 (0.000)	98 (0.790)	55/276	0.7	100%	intergenic (‑12/+95)	yjhF/yjhG	KpLE2 phage‑like element; putative transporter YjhF/KpLE2 phage‑like element; D‑xylonate dehydratase

Only 100 of 123 total aligned reads displayed.

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289975‑2290113

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTATG  <  NC_000913/4522035‑4521898

AAAATCTCTTTTCTGGTCTGATGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  1:943347/140‑1

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           >  1:1011647/1‑140

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           >  2:496965/1‑140

 AAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                          <  1:675150/140‑1

 AAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                          <  1:1269586/140‑1

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         >  2:601884/1‑140

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         >  1:894660/1‑140

   ATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAT                                                                                                                                        <  1:443514/140‑1

   ATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAT                                                                                                                                        >  1:316679/1‑140

   ATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAT                                                                                                                                        <  1:237202/140‑1

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATG                                                                                                                                       >  1:1045694/1‑140

     CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGA                                                                                                                                      <  2:1802391/140‑1

       CTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGA                                                                                                                                    <  2:1045694/140‑1

       CTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGA                                                                                                                                    <  1:267208/140‑1

        TTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAG                                                                                                                                   <  1:1877666/140‑1

          TTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGA                                                                                                                                 >  2:1853835/1‑140

                   GACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCC                                                                                                                        <  2:1410597/140‑1

                   GACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCC                                                                                                                        <  1:1826353/140‑1

                    ACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCA                                                                                                                       <  2:572415/140‑1

                      GGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACT                                                                                                                     <  2:162900/140‑1

                         GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAAT                                                                                                                  >  1:1085585/1‑140

                         GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCACACCTTCCTTATGAGAGGACGTTATGCCACTAAT                                                                                                                  >  2:395212/1‑140

                                GCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTT                                                                                                           <  2:977969/140‑1

                                   GAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTG                                                                                                        <  1:1928008/140‑1

                                   GAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTG                                                                                                        <  1:1706212/140‑1

                                    AATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGG                                                                                                       <  2:181791/140‑1

                                     ATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGC                                                                                                      <  2:1085585/140‑1

                                     ATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGC                                                                                                      <  2:979014/140‑1

                                       TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAG                                                                                                    <  1:1099278/140‑1

                                       TCACTGTCGGCGAAGGTAAGTTGATGACTCA‑GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGG                                                                                                   <  2:1193302/140‑1

                                         ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGG                                                                                                  >  1:562319/1‑140

                                         ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGG                                                                                                  >  2:1992353/1‑140

                                          ctaTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 <  1:1885731/137‑1

                                          CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 <  1:1395119/140‑1

                                          CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 >  2:1679615/1‑140

                                          CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 <  1:1108268/140‑1

                                          CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 <  1:496965/140‑1

                                          CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 <  1:2038063/140‑1

                                          CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGA                                                                                                 <  1:1673488/140‑1

                                           TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGAT                                                                                                <  1:395212/140‑1

                                           TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGAACGTTATGCCACTAATTATCGTTGTGGCAGGGAT                                                                                                <  2:693384/140‑1

                                              CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGC                                                                                             >  1:12570/1‑140

                                              CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGC                                                                                             >  2:695713/1‑140

                                               GGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCT                                                                                            <  1:1312569/140‑1

                                               GGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCT                                                                                            >  2:11246/1‑140

                                                  GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTA                                                                                         <  2:316679/140‑1

                                                     GGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTC                                                                                      <  2:867998/140‑1

                                                       TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCT                                                                                    >  2:2037694/1‑140

                                                             GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTT                                                                              <  2:103073/140‑1

                                                                GACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAAC                                                                           >  2:1074136/1‑140

                                                                GACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAAC                                                                           >  1:598705/1‑140

                                                                   TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCAT                                                                        >  2:147858/1‑140

                                                                        ATGAACCCTGTTCTATGACTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAA                                                                   >  1:969254/1‑140

                                                                          GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATT                                                                 <  2:598705/140‑1

                                                                          GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATT                                                                 <  2:562319/140‑1

                                                                            ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAA                                                               >  2:205884/1‑140

                                                                             CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAG                                                              >  1:370056/1‑140

                                                                               CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCT                                                            >  2:335108/1‑140

                                                                                 GTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTA                                                          >  1:497379/1‑140

                                                                                  TTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAA                                                         >  1:2101370/1‑140

                                                                                      ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACG                                                     <  1:205884/140‑1

                                                                                       TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGT                                                    >  1:896399/1‑140

                                                                                       TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGT                                                    >  2:1233114/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTT                                               <  1:701042/140‑1

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTT                                               >  1:1840396/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTT                                               >  2:701042/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTT                                               >  2:482406/1‑140

                                                                                              AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTC                                             <  1:2037694/140‑1

                                                                                               GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCG                                            >  1:624526/1‑140

                                                                                                 TGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTT                                          <  1:1145225/140‑1

                                                                                                    CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAAT                                       >  1:1653864/1‑140

                                                                                                        CATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATT                                   <  1:335108/140‑1

                                                                                                             TCTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTC                              >  2:1369631/1‑140

                                                                                                              CTCATATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCG                             >  1:1181724/1‑140

                                                                                                                  TATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTG                         >  2:1405909/1‑140

                                                                                                                   ATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGC                        >  2:975761/1‑140

                                                                                                                   ATCAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGC                        >  1:1309255/1‑140

                                                                                                                     CAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTG                      <  1:267463/140‑1

                                                                                                                     CAGGGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTG                      <  2:2062141/140‑1

                                                                                                                        GGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCG                   >  1:1984995/1‑140

                                                                                                                        GGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCG                   >  1:356652/1‑140

                                                                                                                        GGACTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACC‑‑AAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCC                 >  2:1649870/1‑140

                                                                                                                           CTTGTTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCaa                >  2:18455/1‑138

                                                                                                                               TTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGC            <  2:2101370/140‑1

                                                                                                                               TTCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGC            <  1:482406/140‑1

                                                                                                                                TCGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCC           <  2:370056/140‑1

                                                                                                                                 CGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCA          <  2:969254/140‑1

                                                                                                                                 CGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCA          <  2:1309255/140‑1

                                                                                                                                 CGCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCA          <  1:766113/140‑1

                                                                                                                                  GCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAG         <  1:147858/140‑1

                                                                                                                                  GCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAG         <  1:1405909/140‑1

                                                                                                                                  GCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAG         <  2:624526/140‑1

                                                                                                                                  GCACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAG         <  1:536194/140‑1

                                                                                                                                    ACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTG       >  2:27313/1‑140

                                                                                                                                    ACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTG       <  1:956902/140‑1

                                                                                                                                    ACCTTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATAAGTTTGTTTCGGTAATTATTGTTTCGATTGCTGTCGCCATCGCCAATG       >  2:1623/1‑140

                                                                                                                                       TTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTA    <  2:1889681/140‑1

                                                                                                                                       TTCCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTA    <  1:695713/140‑1

                                                                                                                                         CCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTATG  <  1:1794493/140‑1

                                                                                                                                         CCTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTATG  >  2:1241213/1‑140

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289975‑2290113

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTATG  <  NC_000913/4522035‑4521898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A