Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F60 I1 R1 18 111.2 3814234 99.3% 3787534 138.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,952,435 IS1 (+) +9 bp coding (170‑178/396 nt) yecN → putative inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1952435 =0 (0.000)98 (0.870) 58/274 0.4 100% coding (170/396 nt) yecN putative inner membrane protein
?NC_000913 = 3584195 NA (NA)noncoding (768/768 nt) IS1 repeat region
* ? NC_000913 = 19524430 (0.000)139 (1.240) 75/274 0.1 100% coding (178/396 nt) yecN putative inner membrane protein
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

CCGGAACGTCGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1952573‑1952435
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATG  <  NC_000913/3584195‑3584058
                                                                                                                                                                                                                                                                                     
CCGGAACGTCGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGAC‑‑‑CAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTA                                                                                                                                        <  1:1290404/140‑1
         CGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACT                                                                                                                                  <  1:1478715/140‑1
         CGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACT                                                                                                                                  >  1:698466/1‑140
         CGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACT                                                                                                                                  >  1:637527/1‑140
         CGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACT                                                                                                                                  >  2:1367793/1‑140
         CGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACT                                                                                                                                  >  1:1376509/1‑140
         CGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACT                                                                                                                                  >  1:321672/1‑140
          GCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTC                                                                                                                                 >  1:867064/1‑140
           CCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCC                                                                                                                                <  2:1447104/140‑1
           CCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCC                                                                                                                                <  2:321672/140‑1
           CCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCC                                                                                                                                <  2:1376509/140‑1
           CCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCC                                                                                                                                <  2:698466/140‑1
           CCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCC                                                                                                                                <  2:834718/140‑1
           CCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCC                                                                                                                                <  1:907927/140‑1
             AGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAA                                                                                                                              <  2:1333324/140‑1
             AGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAA                                                                                                                              <  1:907764/140‑1
               CGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGTCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACT                                                                                                                            >  1:854568/1‑140
               CGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACT                                                                                                                            >  1:1582022/1‑140
                GGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTT                                                                                                                           <  1:1866342/140‑1
                      GACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGAT                                                                                                                     <  2:991718/140‑1
                      GACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGAT                                                                                                                     <  2:637527/140‑1
                         GGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGTCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGT                                                                                                                  <  2:854568/140‑1
                         GGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGT                                                                                                                  <  1:39325/140‑1
                              TGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTT                                                                                                             <  2:1582022/140‑1
                                   ACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTT                                                                                                        <  2:920398/140‑1
                                     CGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCA                                                                                                      >  2:952144/1‑140
                                               CATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC                                                                                            >  1:1757497/1‑140
                                               CATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC                                                                                            >  2:1427291/1‑140
                                                ATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG                                                                                           <  2:1757497/140‑1
                                                   AGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATG                                                                                        >  2:1488947/1‑140
                                                    GACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGA                                                                                       >  2:614693/1‑140
                                                      ccACCAGCCAGCAAAACCATGCCGCAAATATGCACCATCCACGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGCTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACT                                                                                     <  2:867598/138‑1
                                                        ACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTT                                                                                   >  2:1844218/1‑140
                                                        ACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTT                                                                                   >  1:1355890/1‑140
                                                         CCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTG                                                                                  >  1:1667774/1‑140
                                                         CCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTG                                                                                  >  1:1823751/1‑140
                                                             CAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCAATGACTTTGTCAT                                                                              >  2:954308/1‑140
                                                               AGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC                                                                            >  1:1404281/1‑140
                                                                  AAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGC                                                                         <  2:867064/140‑1
                                                                      CGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCA                                                                     <  1:452827/140‑1
                                                                      CGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCAATGACTTTGTCATGCAGCTCCA                                                                     <  1:954308/140‑1
                                                                            CGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATT                                                               <  1:962655/140‑1
                                                                            CGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACC                                                                   <  1:662177/136‑1
                                                                            CGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACC                                                                   >  2:662177/1‑136
                                                                            CGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATG                                                                             >  1:1217182/1‑126
                                                                            CGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATG                                                                             <  2:1217182/126‑1
                                                                              CAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTT                                                             <  1:1444252/140‑1
                                                                                 ATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAG                                                          <  1:1096142/140‑1
                                                                                         CATCCAGGTTTCTGCGCCATTCATTT‑CATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGC                                                 <  1:451644/140‑1
                                                                                          ATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGC                                                 >  1:1061567/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGGCTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  2:711180/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  2:1501725/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  2:1676619/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  1:1510542/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  2:74823/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  1:965875/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  1:1171208/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG                                                >  1:1086254/1‑140
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAA                                                        >  2:1203445/1‑132
                                                                                           TCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAA                                                        <  1:1203445/132‑1
                                                                                                    CTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTC                                       <  2:965875/140‑1
                                                                                                     TGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGTTCCACCGATTTTGAGAACGACAGCGACTTCCGTCC                                      >  2:315126/1‑140
                                                                                                     TGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCC                                      <  1:1488947/140‑1
                                                                                                     TGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCC                                      >  1:1720028/1‑140
                                                                                                     TGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCC                                      >  2:1510475/1‑140
                                                                                                     TGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCC                                      >  1:98613/1‑140
                                                                                                     TGCGCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCC                                      >  1:565570/1‑140
                                                                                                        GCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGTTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAG                                   <  1:315126/140‑1
                                                                                                        GCCATTCATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAG                                   <  1:952144/140‑1
                                                                                                               ATTTCCATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCC                            <  1:1427291/140‑1
                                                                                                                    CATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT                                        >  2:1423499/1‑123
                                                                                                                    CATAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT                                        <  1:1423499/123‑1
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCT                     <  2:1510542/140‑1
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGC                      <  1:1427150/139‑1
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTG                       >  1:35435/1‑138
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTG                       <  2:35435/138‑1
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCC                                 <  1:1812838/128‑1
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCC                                 >  2:1812838/1‑128
                                                                                                                      TAAACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAAAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGC                      >  2:1427150/1‑139
                                                                                                                         ACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCC                  <  2:1086254/140‑1
                                                                                                                         ACAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTATCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCC                  >  2:134830/1‑140
                                                                                                                          CAGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCT                 <  1:614693/140‑1
                                                                                                                           AGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTC                <  1:74823/140‑1
                                                                                                                           AGCATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTC                >  2:561190/1‑140
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTGAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAG              >  1:1033776/1‑140
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAG              >  2:1346909/1‑140
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAG              >  2:1295006/1‑140
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAG              >  1:754312/1‑140
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAG              >  1:257463/1‑140
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCC                            >  2:658289/1‑126
                                                                                                                             CATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCC                            <  1:658289/126‑1
                                                                                                                              ATCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGA             >  2:782655/1‑140
                                                                                                                               TCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGAT            <  2:1355890/140‑1
                                                                                                                               TCAGCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGAT            <  2:1404281/140‑1
                                                                                                                                  GCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCA         <  1:1501725/140‑1
                                                                                                                                  GCACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCA         >  2:1483183/1‑140
                                                                                                                                   CACAATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAG        >  1:1849233/1‑140
                                                                                                                                         CGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATG  <  1:1295006/140‑1
                                                                                                                                                                                                                                                                                     
CCGGAACGTCGCCAGCGGAACAGACGGTGATGAAAACCGTAATAATGCATCAGACGACCAGCAAGCAAAACGATGCCGCAAATATGCACCATCCAGGTTTCTGCGCCATTCATTTCCATAAACAGCATCAGCACAATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1952573‑1952435
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATG  <  NC_000913/3584195‑3584058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A