Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F60 I1 R1 15 55.1 2015454 99.1% 1997314 138.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,520,971 +A noncoding (41/76 nt) valU → tRNA‑Val

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,520,9701.A93.3% 191.5 / 5.7 60noncoding (40/76 nt)valUtRNA‑Val
Reads supporting (aligned to +/- strand):  ref base . (3/1);  new base A (18/38);  total (21/39)
Fisher's exact test for biased strand distribution p-value = 1.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.23e-01

ATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑AGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGG  >  NC_000913/2520839‑2521100
                                                                                                                                    |                                                                                                                                  
atcTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑Aagggggt                                                                                                                            >  1:272229/1‑138 (MQ=255)
atcTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑Aagggggt                                                                                                                            >  1:286230/1‑138 (MQ=255)
atcTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑Aagggggc                                                                                                                            >  1:994948/1‑138 (MQ=255)
atcTTGCTTAAATTTACGACGAACGAACAATTTCCTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑Aagggggt                                                                                                                            >  2:428324/1‑138 (MQ=255)
  cTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTcg                                                                                                                           <  2:831392/140‑1 (MQ=255)
  cTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTcg                                                                                                                           <  1:759718/140‑1 (MQ=255)
   ttGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTcgg                                                                                                                          <  1:650621/140‑1 (MQ=255)
     gCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTcggcg                                                                                                                        >  2:37865/1‑140 (MQ=255)
             ttACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATc                                                                                                                <  1:412805/140‑1 (MQ=255)
               acgacgAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATccc                                                                                                              >  1:598447/1‑140 (MQ=255)
                cgacgaACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTcgg                                                                                                                          <  2:366143/127‑1 (MQ=255)
                cgacgaACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTcgg                                                                                                                          >  1:366143/1‑127 (MQ=255)
                cgacgaACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCg                                                                                                             >  1:18998/1‑140 (MQ=255)
                    gaacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTCGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGtcat                                                                                                         <  1:508950/140‑1 (MQ=255)
                     aacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGtcatc                                                                                                        >  2:519851/1‑140 (MQ=255)
                     aacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGtcatc                                                                                                        >  1:387437/1‑140 (MQ=255)
                        gaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATcacc                                                                                                     <  1:289346/140‑1 (MQ=255)
                              tttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa                                                                                               <  1:978698/140‑1 (MQ=255)
                              tttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa                                                                                               <  2:286230/140‑1 (MQ=255)
                              tttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa                                                                                               <  1:747053/140‑1 (MQ=255)
                              tttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCGGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCTTCATCACCCTCCaa                                                                                               <  2:994948/140‑1 (MQ=25)
                                 cTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATcac                                                                                                      <  2:901757/130‑1 (MQ=255)
                                 cTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATcac                                                                                                      <  2:255334/130‑1 (MQ=255)
                                 cTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATcac                                                                                                      >  1:901757/1‑130 (MQ=255)
                                 cTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATcac                                                                                                      >  1:255334/1‑130 (MQ=255)
                                  tttAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactac                                                                                           <  2:18998/140‑1 (MQ=255)
                                   ttAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactact                                                                                          <  1:815642/140‑1 (MQ=255)
                                   ttAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactact                                                                                          <  2:598447/140‑1 (MQ=255)
                                           tcggTTGACTATTTTGGAGCTCTCCCTA‑AAAGCGAACGCACACAACGGGGGTGATTAGCTCAGCTGGGAGAGCTCCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGt                                                                                 <  2:949849/137‑1 (MQ=17)
                                           tGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa                                                                                               >  1:596506/1‑127 (MQ=255)
                                           tGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa                                                                                               <  2:596506/127‑1 (MQ=255)
                                            gCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGt                                                                                 <  1:253053/140‑1 (MQ=255)
                                                tGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑AGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccg                                                                            <  1:528617/140‑1 (MQ=255)
                                                 gACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccg                                                                            <  2:438180/140‑1 (MQ=255)
                                                 gACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTACCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccg                                                                            <  1:334121/140‑1 (MQ=255)
                                                           gAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCa                                                                  <  1:428324/140‑1 (MQ=255)
                                                             aCTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAg                                                                <  1:674588/140‑1 (MQ=255)
                                                             aCTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAg                                                                <  2:422071/140‑1 (MQ=255)
                                                                     tataATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTgag                                                        <  2:196827/140‑1 (MQ=255)
                                                                         aTGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGt                                                    <  2:387437/140‑1 (MQ=255)
                                                                         aTGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGt                                                    <  1:519851/140‑1 (MQ=255)
                                                                         aTGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGt                                                    <  1:227409/140‑1 (MQ=255)
                                                                           gCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTgg                                                  >  1:99606/1‑140 (MQ=255)
                                                                           gCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCAC‑‑‑CCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAg                                                                <  2:691853/123‑1 (MQ=21)
                                                                           gCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCAC‑‑‑CCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAg                                                                >  1:691853/1‑123 (MQ=21)
                                                                             gACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAAtt                                                           <  1:883548/129‑1 (MQ=255)
                                                                             gACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAAtt                                                           >  2:883548/1‑129 (MQ=255)
                                                                               cTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGACGGCGGTTCGACGCCGCCGTCAACCACCGAGTACTTTATGTAGTCTCCCCCCGGTAGCAAGAAAATGAGAAGGGGGTGa                                              >  2:433667/1‑140 (MQ=21)
                                                                                   acacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAg                                          <  2:272229/140‑1 (MQ=255)
                                                                                    cacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGc                                         >  1:963733/1‑140 (MQ=255)
                                                                                     acaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCt                                        <  2:99606/140‑1 (MQ=255)
                                                                                         cGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTACTTTCTGTAGTCTCCTCCGTGGAGCAGGTAATTTTTAAATGGGTGATTAGCGCAGc                                    >  2:31713/1‑140 (MQ=17)
                                                                                         cGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTgg                                                  <  1:891612/126‑1 (MQ=255)
                                                                                         cGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTgg                                                  >  2:891612/1‑126 (MQ=255)
                                                                                         cGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGc                                    <  2:424345/140‑1 (MQ=255)
                                                                                         cGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGc                                    >  1:513553/1‑140 (MQ=255)
                                                                                            gggTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTgg                                 >  1:806726/1‑140 (MQ=255)
                                                                                              gTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTGCTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGga                               <  2:513553/140‑1 (MQ=255)
                                                                                                   tAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCa                          <  1:321277/140‑1 (MQ=255)
                                                                                                    aGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAc                         <  1:433667/140‑1 (MQ=255)
                                                                                                      cTCAGCTTGGAGAGCGCCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCt                       <  2:812745/140‑1 (MQ=37)
                                                                                                        cAGCTGGGAGAGCACCTCCCTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTcc                     >  1:206179/1‑140 (MQ=255)
                                                                                                                           cTTACAAGGAAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTcgg  <  1:37865/140‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                  
ATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGG‑AGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGG  >  NC_000913/2520839‑2521100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A