Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F60 I1 R1
|
21 |
123.7 |
4184002 |
99.2% |
4150529 |
137.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,485,655 |
A→T |
I55N (ATC→AAC) |
yhfA ← |
OsmC family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,485,655 | 0 | A | T | 100.0%
| 390.7
/ NA
| 112 | I55N (ATC→AAC) | yhfA | OsmC family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (55/57); total (55/57) |
Only 100 of 114 total aligned reads displayed.
CGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGTTAA > NC_000913/3485519‑3485788
|
cGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCg < 2:1719557/140‑1 (MQ=255)
cTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGaa < 1:1799330/140‑1 (MQ=255)
cTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGaa < 1:1302190/140‑1 (MQ=255)
tGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGaaa > 1:777338/1‑140 (MQ=255)
cGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAAcc > 1:1756885/1‑140 (MQ=255)
cGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAAcc > 2:834345/1‑140 (MQ=255)
cTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACcaca < 1:1542060/140‑1 (MQ=255)
ttCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATc > 2:262942/1‑140 (MQ=255)
aGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGAt < 2:612697/140‑1 (MQ=255)
gTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGa < 2:934168/126‑1 (MQ=255)
gTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATgg > 1:1106598/1‑140 (MQ=255)
cgcgACCGGTGACGATAAATTGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCa > 1:1768626/1‑140 (MQ=255)
cgcgACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCa < 1:67207/140‑1 (MQ=255)
cgACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACcac < 2:157900/128‑1 (MQ=255)
cgACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACcac > 1:157900/1‑128 (MQ=255)
gACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTg > 1:1261989/1‑140 (MQ=255)
aCCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCAc < 2:1268563/137‑1 (MQ=255)
aCCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCAc > 1:1268563/1‑137 (MQ=255)
cGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCaa < 1:988073/140‑1 (MQ=255)
ggTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAac < 2:1261989/140‑1 (MQ=255)
gTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCaa > 1:549184/1‑138 (MQ=255)
gTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCaa < 2:549184/138‑1 (MQ=255)
gATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACccg < 1:1892200/140‑1 (MQ=255)
tAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACccgcc > 1:1922562/1‑140 (MQ=255)
tAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACccgcc > 1:1123307/1‑140 (MQ=255)
tAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACccgcc > 1:1621653/1‑140 (MQ=255)
aTGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCa > 2:1131008/1‑140 (MQ=255)
gATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAac < 1:1917384/140‑1 (MQ=255)
aTTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATc < 2:1529739/136‑1 (MQ=255)
aTTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAaca > 2:448707/1‑140 (MQ=255)
ttAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAacac < 2:1106598/140‑1 (MQ=255)
aTGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAt < 2:2074181/140‑1 (MQ=255)
aTGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAt < 1:834345/140‑1 (MQ=255)
aTGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAt < 1:973418/140‑1 (MQ=255)
tgtgCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAtt < 1:633478/140‑1 (MQ=255)
tgtgCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAtt > 1:1757503/1‑140 (MQ=255)
gTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAac > 2:1238195/1‑129 (MQ=255)
gTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAt > 1:958486/1‑134 (MQ=255)
gTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCAt < 2:958486/134‑1 (MQ=255)
gTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCAt > 2:1633184/1‑140 (MQ=255)
gTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCAt < 1:1272912/140‑1 (MQ=255)
cAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGAc < 2:1768626/140‑1 (MQ=255)
gCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACt > 1:156583/1‑138 (MQ=255)
gCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACt < 2:156583/138‑1 (MQ=255)
cGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTgg < 2:1621653/140‑1 (MQ=255)
cGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTgg < 2:1756885/140‑1 (MQ=255)
gtggtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGCCCCCATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCCCCCGCCGCCATCAACACCATTTCCATCGGACTTGGt < 1:1331349/140‑1 (MQ=255)
gtggtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGt < 1:1095746/140‑1 (MQ=255)
tggtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACt > 2:1632103/1‑135 (MQ=255)
tggtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACt < 1:1632103/135‑1 (MQ=255)
gtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCt > 1:868022/1‑140 (MQ=255)
gtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCt > 1:199299/1‑140 (MQ=255)
gtgCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCt > 2:1873914/1‑140 (MQ=255)
ccTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTa > 1:270091/1‑140 (MQ=255)
ctctTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTAt < 1:1131008/140‑1 (MQ=255)
tctTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCgg > 1:691370/1‑125 (MQ=255)
tctTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATc > 2:1126159/1‑140 (MQ=255)
tctTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATc > 1:685609/1‑140 (MQ=255)
tctTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATc < 2:777338/140‑1 (MQ=255)
gcgTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGt > 2:1015851/1‑140 (MQ=255)
tCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCtt < 1:1925570/124‑1 (MQ=255)
tCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCtt > 2:1925570/1‑124 (MQ=255)
tCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGcc < 1:987743/140‑1 (MQ=255)
agagGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGt < 1:1015851/140‑1 (MQ=255)
agagGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGt < 2:270091/140‑1 (MQ=255)
agagGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGt < 1:313952/140‑1 (MQ=255)
aaTTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTaa > 1:238093/1‑140 (MQ=255)
aaTTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTaa > 2:1786910/1‑140 (MQ=255)
tACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCt > 2:1399090/1‑140 (MQ=255)
tACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCt > 1:1640437/1‑140 (MQ=255)
tACTTCACAATCGACCACATCCCGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCt > 1:1113291/1‑140 (MQ=255)
cacaATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGTTTTATCGCCTGAGTTGCCGTCCATTAAAATCtg < 2:2089939/136‑1 (MQ=255)
caATCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGAcc > 2:460782/1‑140 (MQ=255)
tCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGAc < 2:1748017/136‑1 (MQ=255)
tCGACCACATCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGAc > 1:1748017/1‑136 (MQ=255)
caTCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGAt < 1:460782/140‑1 (MQ=255)
caTCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGAt < 1:262942/140‑1 (MQ=255)
caTCCTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGAt > 1:100359/1‑140 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCACCCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCg < 1:498228/140‑1 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCtgatg < 2:968805/124‑1 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCg < 1:150520/140‑1 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCg > 2:434636/1‑140 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCg > 1:1592920/1‑140 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCg > 1:1866634/1‑140 (MQ=255)
ccTGACGCCCTTTTTGCAGGTTCGAAACCACATCGATGACACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCtgatg > 1:968805/1‑124 (MQ=255)
aCGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGGCCAGAGGCGGATTCGCCCa > 2:950186/1‑140 (MQ=255)
aCGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCg < 1:1906942/136‑1 (MQ=255)
aCGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCa < 2:1922562/140‑1 (MQ=255)
aCGCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTACAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCa > 2:1282451/1‑140 (MQ=255)
gCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGa < 2:199299/140‑1 (MQ=255)
gCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGa < 1:1825316/140‑1 (MQ=255)
gCCCTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGa < 2:566852/140‑1 (MQ=255)
ccTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTCCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGaaa > 1:1074224/1‑140 (MQ=255)
ccTTTTTGCAGCTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGaaa > 1:204904/1‑140 (MQ=255)
cTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGaaaa < 2:685609/140‑1 (MQ=255)
cTTTTTGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGaaaa > 2:847626/1‑140 (MQ=255)
tttGCAGGTTCGAAACCACATCGATGGCACTACAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGtt < 1:1282451/140‑1 (MQ=255)
ttGCAGGTTCGAAACCCCATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGTTa < 2:1866634/140‑1 (MQ=255)
ttGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGTTa < 2:1592920/140‑1 (MQ=255)
tGCAGGTTCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGGCCAGAGGCGGATTCGCCCAGAAAAGTTaa < 1:950186/140‑1 (MQ=255)
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CGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGTTAA > NC_000913/3485519‑3485788
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
