Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	145	69.6	2346944	99.3%	2330515	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,720,013	T→C	S21P (TCG→CCG)	patZ →	peptidyl‑lysine acetyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,720,013	0	T	C	100.0%	200.4 / NA	57	S21P (TCG→CCG)	patZ	peptidyl‑lysine acetyltransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (26/31); total (26/31)

CATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGTCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCTT  >  NC_000913/2719880‑2720149

cATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGa                                                                                                                                    >  2:1088485/1‑140 (MQ=255)

           cATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATcgc                                                                                                                         >  1:969420/1‑140 (MQ=255)

           cATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATcgc                                                                                                                         >  2:637604/1‑140 (MQ=255)

           cATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATcg                                                                                                                          >  1:1132971/1‑139 (MQ=255)

           cATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATcg                                                                                                                          <  2:1132971/139‑1 (MQ=255)

            aTCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGTGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATcgcg                                                                                                                        <  2:788392/140‑1 (MQ=255)

            aTCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATcgcg                                                                                                                        <  2:969420/140‑1 (MQ=255)

             tCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCgcgc                                                                                                                       <  2:842033/140‑1 (MQ=255)

              cacaGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCa                                                                                                                      <  2:375943/140‑1 (MQ=255)

                cagcagAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAgg                                                                                                                    <  2:77424/140‑1 (MQ=255)

                cagcagAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAgg                                                                                                                    <  2:1067587/140‑1 (MQ=255)

                cagcagAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAgg                                                                                                                    >  2:925430/1‑140 (MQ=255)

                  gcagAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGtt                                                                                                                  >  2:429820/1‑140 (MQ=255)

                  gcagAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGtt                                                                                                                  <  2:247003/140‑1 (MQ=255)

                     gAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTAcc                                                                                                               <  1:429820/140‑1 (MQ=255)

                     gAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTAcc                                                                                                               >  1:522423/1‑140 (MQ=255)

                      aaCAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCt                                                                                                              >  2:1010749/1‑140 (MQ=255)

                       aCAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCtg                                                                                                             <  1:925430/140‑1 (MQ=255)

                                aaGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGt                                                                                                    >  1:640680/1‑140 (MQ=255)

                                aaGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGt                                                                                                    >  1:588508/1‑140 (MQ=255)

                                             cATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCgg                                                                                       <  1:1083704/140‑1 (MQ=255)

                                             cATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCgg                                                                                       <  1:592536/140‑1 (MQ=255)

                                               ttCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACctgc                                                                                             <  2:424998/132‑1 (MQ=255)

                                               ttCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACctgc                                                                                             >  1:424998/1‑132 (MQ=255)

                                               ttCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCgggg                                                                                     >  1:122018/1‑139 (MQ=255)

                                               ttCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGa                                                                                     <  2:975840/140‑1 (MQ=255)

                                                 cGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAgg                                                                                   <  2:522423/140‑1 (MQ=255)

                                                         tCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACg                                                                           <  2:588508/140‑1 (MQ=255)

                                                         tCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACg                                                                           <  1:1010749/140‑1 (MQ=255)

                                                                 agaCCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTa                                                                   <  1:169964/140‑1 (MQ=255)

                                                                       gTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCT‑GCGGGAGGCTTTAACGGACCGGTACTCCCgg                                                            >  1:52115/1‑140 (MQ=255)

                                                                          tGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTg                                                          >  1:502255/1‑140 (MQ=255)

                                                                             gTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACg                                                       <  2:756202/140‑1 (MQ=255)

                                                                                 gCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACg                                                       <  2:61681/136‑1 (MQ=255)

                                                                                 gCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACg                                                       >  1:61681/1‑136 (MQ=255)

                                                                                 gCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAg                                                   >  2:285070/1‑140 (MQ=255)

                                                                                       aCTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGa                                             >  1:915781/1‑140 (MQ=255)

                                                                                         tGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGaaa                                           <  1:559132/140‑1 (MQ=255)

                                                                                          ggAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAg                                          <  1:783240/140‑1 (MQ=255)

                                                                                           gAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGc                                         <  2:640680/140‑1 (MQ=255)

                                                                                           gAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGc                                         <  1:1088485/140‑1 (MQ=255)

                                                                                           gAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGc                                         >  1:795649/1‑140 (MQ=255)

                                                                                            aaGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCg                                        <  1:38989/140‑1 (MQ=255)

                                                                                               cACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAGCCCAATCGCGCAGGTTCCCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGgtg                                     <  1:117968/140‑1 (MQ=255)

                                                                                                actactGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGgtgt                                    >  2:1115282/1‑140 (MQ=255)

                                                                                                 ctactGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGtt                                   >  1:87997/1‑140 (MQ=255)

                                                                                                 ctactGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATACGTAACCTGCTGGCGGGAGGGTTTAACGGACCGGTACTCCCGGGGACGCCAGCCTGGAAAGCGGGGtt                                   >  2:814802/1‑140 (MQ=255)

                                                                                                   actGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTgg                                 >  1:640612/1‑140 (MQ=255)

                                                                                                   actGCGACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGGGACGCCAGCCTGGAAAGCGGTGTTgg                                 >  2:1027288/1‑140 (MQ=255)

                                                                                                        gACCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGgtgtg                            <  2:87997/140‑1 (MQ=255)

                                                                                                         aCCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGGGGCCTTAAAGGACCCGTACTCCCCGGGACGCCCGCCTGGAAAGCGGTGTTGGgggtgt                           >  2:117968/1‑140 (MQ=255)

                                                                                                         aCCAAAATCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGgtgtgt                           >  2:181585/1‑140 (MQ=255)

                                                                                                             aaaTCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTtggc                       >  2:225941/1‑140 (MQ=255)

                                                                                                             aaaTCGATAGCGGTAATTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTtggc                       <  1:225941/140‑1 (MQ=255)

                                                                                                                           aaTTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTg         <  1:285070/140‑1 (MQ=255)

                                                                                                                            aTTGGCGCGCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGc        <  1:637604/140‑1 (MQ=255)

                                                                                                                                gcgcgcCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGc    <  2:640612/140‑1 (MQ=255)

                                                                                                                                 cgcgCCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCT‑GCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCtt  <  2:52115/140‑1 (MQ=255)

CATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGTCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCTT  >  NC_000913/2719880‑2720149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A