Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A46 F30 I1 R1	21	163.1	5590070	99.5%	5562119	139.1

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	783,858	A→G	E231E (GAA→GAG)	pnuC →	nicotinamide riboside transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	783,858	0	A	G	100.0%	1005.8 / NA	261	E231E (GAA→GAG)	pnuC	nicotinamide riboside transporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (128/133); total (128/133)

Only 100 of 261 total aligned reads displayed.

TTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTGATCCA  >  NC_000913/783724‑783994

   tgGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTc                                                                                                                                  >  1:601877/1‑140 (MQ=255)

        gATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcg                                                                                                                             <  1:1230607/140‑1 (MQ=255)

         attattAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgc                                                                                                                            >  2:576692/1‑140 (MQ=255)

          ttatttACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:897322/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:815781/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:741887/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  2:735432/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:1674054/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:242568/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:2359691/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:2241903/140‑1 (MQ=255)

          ttattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           >  2:278489/1‑140 (MQ=255)

           tattaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACgcgcgc                                                                                                                          <  2:580036/140‑1 (MQ=255)

            attaACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCACGCt                                                                                                                         <  2:20052/140‑1 (MQ=255)

              taACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGt                                                                                                                       <  2:1009490/140‑1 (MQ=255)

              taACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGt                                                                                                                       <  2:1786380/140‑1 (MQ=255)

               aaCGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACgcgcgc                                                                                                                          >  2:33656/1‑136 (MQ=255)

                  gTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCa                                                                                                                   <  1:2006134/140‑1 (MQ=255)

                  gTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCa                                                                                                                   >  1:356817/1‑140 (MQ=255)

                    gATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:1272668/130‑1 (MQ=255)

                    gATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCAtt                                                                                                                 >  2:167240/1‑140 (MQ=255)

                     aTTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTa                                                                                                                >  1:1395687/1‑140 (MQ=255)

                     aTTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTa                                                                                                                >  2:1652433/1‑140 (MQ=255)

                     aTTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTa                                                                                                                >  1:2739600/1‑140 (MQ=255)

                       tAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAAt                                                                                                              >  1:2311097/1‑140 (MQ=255)

                        aGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATg                                                                                                             >  1:1355328/1‑140 (MQ=255)

                          cgtcgtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGt                                                                                                           >  1:2399579/1‑140 (MQ=255)

                          cgtcgtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGt                                                                                                           <  1:1991908/140‑1 (MQ=255)

                           gtcgtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGtg                                                                                                          <  2:1989398/140‑1 (MQ=255)

                            tcgtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           <  1:2698966/122‑1 (MQ=255)

                            tcgtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCAcgcgcg                                                                                                                           >  2:2698966/1‑122 (MQ=255)

                              gtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCAtt                                                                                                                 >  2:1368918/1‑130 (MQ=255)

                              gtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGtgatg                                                                                                       >  2:1959545/1‑140 (MQ=255)

                              gtTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGtgatg                                                                                                       >  2:960270/1‑140 (MQ=255)

                                       gCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGaa                                                                                                >  1:2516116/1‑138 (MQ=255)

                                       gCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATg                                                                                              >  2:634775/1‑140 (MQ=255)

                                             cAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGtg                                                                                                          >  2:1825190/1‑122 (MQ=255)

                                             cAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGa                                                                                        <  2:2311097/140‑1 (MQ=255)

                                             cAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGa                                                                                        >  2:975662/1‑140 (MQ=255)

                                               gggCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGaca                                                                                      <  2:60542/140‑1 (MQ=255)

                                                     ttACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCtt                                                                                >  1:1174959/1‑140 (MQ=255)

                                                            aTGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAg                                                                         >  2:2107332/1‑140 (MQ=255)

                                                              gTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGt                                                                       >  2:2481970/1‑140 (MQ=255)

                                                               tctcTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTg                                                                      <  2:2529924/140‑1 (MQ=255)

                                                                ctctGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTgg                                                                     <  2:2384087/140‑1 (MQ=255)

                                                                   tGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAg                                                                  >  2:310504/1‑140 (MQ=255)

                                                                     gAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTc                                                                <  2:1956277/140‑1 (MQ=255)

                                                                     gAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTc                                                                <  2:1220026/140‑1 (MQ=255)

                                                                        tACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTc                                                                >  1:388649/1‑137 (MQ=255)

                                                                        tACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTc                                                                <  2:388649/137‑1 (MQ=255)

                                                                        tACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTgg                                                             >  1:194377/1‑140 (MQ=255)

                                                                        tACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTgg                                                             >  2:1446116/1‑140 (MQ=255)

                                                                         aCATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGc                                                            >  2:1045897/1‑140 (MQ=255)

                                                                          catcatCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGcc                                                           >  2:398969/1‑140 (MQ=255)

                                                                          catcatCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGcc                                                           <  1:576359/140‑1 (MQ=255)

                                                                          catcatCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGcc                                                           <  1:1827547/140‑1 (MQ=255)

                                                                               tcCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGa                                                      >  1:730292/1‑140 (MQ=255)

                                                                               tcCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGa                                                      <  1:975662/140‑1 (MQ=255)

                                                                               tcCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGa                                                      >  2:126715/1‑140 (MQ=255)

                                                                               tcCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGa                                                      <  1:1022690/140‑1 (MQ=255)

                                                                               tcCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGa                                                      >  2:2166734/1‑140 (MQ=255)

                                                                                ccTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGAc                                                     >  1:214297/1‑140 (MQ=255)

                                                                                     ccTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGt                                                <  2:730292/140‑1 (MQ=255)

                                                                                         tATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGat                                            >  1:1808226/1‑140 (MQ=255)

                                                                                              cgcTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTcc                                       >  2:2358928/1‑140 (MQ=255)

                                                                                                cTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTcc                                       <  2:462041/138‑1 (MQ=255)

                                                                                                cTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCAt                                     >  1:18477/1‑140 (MQ=255)

                                                                                                cTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCAt                                     >  2:2425574/1‑140 (MQ=255)

                                                                                                  cAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCt                                   <  1:1652433/140‑1 (MQ=255)

                                                                                                   aaCGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTg                                  >  1:2558735/1‑140 (MQ=255)

                                                                                                   aaCGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTg                                  >  1:2339333/1‑140 (MQ=255)

                                                                                                   aaCGGCAGCCGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTg                                  >  2:2279305/1‑140 (MQ=255)

                                                                                                            cGGATGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGc                         <  1:2622743/140‑1 (MQ=255)

                                                                                                               aTGTGGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTg                      <  1:48447/140‑1 (MQ=255)

                                                                                                                 gtgGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    <  2:8063/140‑1 (MQ=255)

                                                                                                                 gtgGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    <  2:1395687/140‑1 (MQ=255)

                                                                                                                 gtgGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    <  1:85298/140‑1 (MQ=255)

                                                                                                                 gtgGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    <  2:837806/140‑1 (MQ=255)

                                                                                                                 gtgGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    <  1:1959545/140‑1 (MQ=255)

                                                                                                                  tgGATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTc                   <  1:1446116/140‑1 (MQ=255)

                                                                                                                   ggATCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    <  1:639450/138‑1 (MQ=255)

                                                                                                                     aTCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAAt                >  1:450811/1‑140 (MQ=255)

                                                                                                                     aTCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAAt                >  2:2069756/1‑140 (MQ=255)

                                                                                                                      tCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATc               <  2:2592283/140‑1 (MQ=255)

                                                                                                                      tCAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATc               <  2:2558735/140‑1 (MQ=255)

                                                                                                                       cAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCt              <  2:870988/140‑1 (MQ=255)

                                                                                                                       cAACAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCt              <  2:752319/140‑1 (MQ=255)

                                                                                                                         aCAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGa            >  2:652790/1‑140 (MQ=255)

                                                                                                                         aCAGCGCACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGa            >  2:1093178/1‑140 (MQ=255)

                                                                                                                            gcgcACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAg         >  2:499875/1‑140 (MQ=255)

                                                                                                                            gcgcACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAg         >  1:319151/1‑140 (MQ=255)

                                                                                                                             cgcACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGt        >  2:2334476/1‑140 (MQ=255)

                                                                                                                              gcACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTg       >  2:1911931/1‑140 (MQ=255)

                                                                                                                              gcACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTg       <  1:1093178/140‑1 (MQ=255)

                                                                                                                              gcACGTGAGAGAGGCTCACACGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTg       <  2:12786/140‑1 (MQ=255)

                                                                                                                               cACGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTTATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCt                    >  2:2726076/1‑126 (MQ=255)

                                                                                                                                aCGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTGAt     <  1:1862128/140‑1 (MQ=255)

                                                                                                                                aCGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTGAt     <  1:2096077/140‑1 (MQ=255)

                                                                                                                                aCGTGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTGAt     <  1:2279305/140‑1 (MQ=255)

                                                                                                                                   tGAGAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTGATCCa  <  1:605643/140‑1 (MQ=255)

TTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAATGGTGATGATGTGAATGGCCAGACACCCCTTCATTCAGGTGGCAGTCTGGCCCATGACAAGGTTGATATTCCATCTGAATGGTGGCGTGCTCAATCTGATAGTGATCCA  >  NC_000913/783724‑783994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A