Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A19 F30 I1 R1
|
22 |
88.0 |
2982758 |
99.3% |
2961878 |
139.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
649,874 |
G→T |
S206Y (TCC→TAC) |
citE ← |
citrate lyase beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 649,874 | 0 | G | T | 94.5%
| 242.1
/ 8.1
| 73 | S206Y (TCC→TAC) | citE | citrate lyase beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base T (33/36); total (35/38) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.28e-01 |
ACTTCTTTCTGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGGAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGTCTTCTGCACC > NC_000913/649739‑650004
|
aCTTCTTTCTGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGCTGTTAGCGTCGTAATa > 2:497982/1‑140 (MQ=255)
cttcttTCTGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAg > 1:10318/1‑140 (MQ=255)
ttctttctGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGa < 1:446650/140‑1 (MQ=255)
ttctttctGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGa < 2:1075047/140‑1 (MQ=255)
tctttctGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGAc > 2:830950/1‑140 (MQ=255)
tctGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTa > 2:64749/1‑140 (MQ=255)
gTCGGTGCGTAGAGGTTGTGTAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGaa > 1:591742/1‑140 (MQ=255)
gTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGaa > 2:363339/1‑140 (MQ=255)
cGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAAc > 1:1341005/1‑139 (MQ=255)
cGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAAc < 2:1341005/139‑1 (MQ=255)
ggTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGc > 1:76491/1‑140 (MQ=255)
gtgCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCag > 1:1167191/1‑140 (MQ=255)
gtgCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCag > 1:763620/1‑140 (MQ=255)
gtgCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCag > 2:202153/1‑140 (MQ=255)
tgCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCaga > 2:641656/1‑140 (MQ=255)
tgCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCaga > 2:750081/1‑140 (MQ=255)
gcagATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTAGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAgcgc > 2:64409/1‑140 (MQ=255)
cagATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAgcgcg < 2:76491/140‑1 (MQ=255)
aTCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCgg > 2:906563/1‑140 (MQ=255)
tCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGc < 2:1325046/140‑1 (MQ=255)
tCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGc < 1:647336/140‑1 (MQ=255)
tCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGc < 1:351079/140‑1 (MQ=255)
tCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGc < 2:511724/140‑1 (MQ=255)
aTCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTg < 1:830950/140‑1 (MQ=255)
aTCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTg < 2:1167191/140‑1 (MQ=255)
aTCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTg < 2:763620/140‑1 (MQ=255)
cTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCa < 2:27556/140‑1 (MQ=255)
tGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCaa > 2:806126/1‑140 (MQ=255)
tGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCa > 2:1365285/1‑139 (MQ=255)
tGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCa < 1:1365285/139‑1 (MQ=255)
aCGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCaaaa > 1:1198499/1‑140 (MQ=255)
cgcgGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCaaaaa > 1:689473/1‑139 (MQ=255)
ggTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGaa > 1:779306/1‑140 (MQ=255)
ggTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGaa > 2:778657/1‑140 (MQ=255)
gTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAAc > 2:1293772/1‑140 (MQ=255)
aTCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCg > 1:1404248/1‑140 (MQ=255)
cAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTg < 2:482647/140‑1 (MQ=255)
gCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCg < 1:939769/140‑1 (MQ=255)
cGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGa > 1:894869/1‑140 (MQ=255)
ttGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAAcag < 1:677944/140‑1 (MQ=255)
ttGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAAcag < 1:812198/140‑1 (MQ=255)
ttGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGCTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAAcag < 1:497982/140‑1 (MQ=255)
tGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTg < 2:1453104/132‑1 (MQ=255)
tGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTg > 1:1453104/1‑132 (MQ=255)
tGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAAcagc > 2:973831/1‑140 (MQ=255)
gTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGcagtt < 1:105582/140‑1 (MQ=255)
aaGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGcagttcagt < 1:363339/140‑1 (MQ=255)
aaGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGcagttcagt > 2:140030/1‑140 (MQ=255)
aaGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTAGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGcagttcagt < 1:64409/140‑1 (MQ=255)
aGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGttccttc > 2:301864/1‑140 (MQ=255)
ttGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGa < 1:778657/140‑1 (MQ=255)
ttGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGa < 2:591742/140‑1 (MQ=255)
gATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGc < 1:504161/140‑1 (MQ=255)
gtgGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGtt < 1:984891/140‑1 (MQ=255)
gtgGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGtt < 2:1210351/140‑1 (MQ=255)
gtgGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGtt < 1:1245862/140‑1 (MQ=255)
gtgGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGtt < 1:203018/140‑1 (MQ=255)
tgGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTc > 2:23365/1‑140 (MQ=255)
gcggcTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGt > 2:875460/1‑140 (MQ=255)
tGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCg > 2:485991/1‑125 (MQ=255)
tGCAGAAATCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCg < 1:485991/125‑1 (MQ=255)
aTCCGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGcaca < 1:1117892/140‑1 (MQ=255)
ccGGCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATa < 2:1404248/140‑1 (MQ=255)
cGGCTTCGTTGTTAGCGTCGGAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGc > 1:1023796/1‑125 (MQ=255)
cGGCTTCGTTGTTAGCGTCGGAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGc > 1:1003864/1‑125 (MQ=255)
cGGCTTCGTTGTTAGCGTCGGAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGc < 2:1003864/125‑1 (MQ=255)
cGGCTTCGTTGTTAGCGTCGGAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGc < 2:1023796/125‑1 (MQ=255)
ggCTTCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGt < 1:1028004/140‑1 (MQ=255)
tCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGtcttc > 1:1304360/1‑140 (MQ=255)
tCGTTGTTAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGtcttc < 2:10318/140‑1 (MQ=255)
ttgttAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGTCTTCTGc > 1:55598/1‑140 (MQ=255)
tgttAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGTCTTCTGCa < 1:641656/140‑1 (MQ=255)
ttAGCGTCGTAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGTCTTCTGCAcc < 2:1220498/140‑1 (MQ=255)
|
ACTTCTTTCTGGGTCGGTGCGTAGAGGTTGTGCAGCAGATCAATCTGACGCGGGTTGATCAGCGATTTGCCGTCAAAGCCCAGCTGTTTGATGTGGGCGGCTTCTTGCAGAAATCCGGCTTCGTTGTTAGCGTCGGAATAGACGGTATCGAACGCCTGAATACCCGCAGAGCGCGCGGCCTGCAAAATGGAACAGCGTGCGAACAGCAGTTCAGTTCCTTCCGGGGAGCGTTCTGTACGCAGGTTGCGCACATAGTCTTCTGCACC > NC_000913/649739‑650004
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
