Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
146 |
75.3 |
2562504 |
98.6% |
2526628 |
139.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,853,629 |
G→A |
A126T (GCC→ACC) |
hypE → |
hydrogenase maturation protein, carbamoyl dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,853,629 | 0 | G | A | 97.3%
| 242.8
/ ‑1.8
| 74 | A126T (GCC→ACC) | hypE | hydrogenase maturation protein, carbamoyl dehydratase |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (36/36); total (37/37) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01 |
ACGTTGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTGCCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCGATGTA > NC_000913/2853501‑2853760
|
aCGTTGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACt < 1:450971/140‑1 (MQ=255)
ttGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGc < 2:1218483/140‑1 (MQ=255)
ttGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGc < 2:833295/140‑1 (MQ=255)
tGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCg > 1:1140342/1‑140 (MQ=255)
tGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCg > 1:526962/1‑140 (MQ=255)
tGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCg > 1:438702/1‑140 (MQ=255)
tGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCg > 2:918982/1‑140 (MQ=255)
tGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTCATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCg < 2:1195115/140‑1 (MQ=255)
gCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGa < 2:1051405/140‑1 (MQ=255)
ggTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATa < 1:1013030/140‑1 (MQ=255)
gTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATAc < 2:987321/140‑1 (MQ=255)
gTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATAc < 2:630529/140‑1 (MQ=255)
cAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTa < 1:946607/140‑1 (MQ=255)
tGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAg < 2:352413/140‑1 (MQ=255)
ggCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTGCAATCGTTACTGGCGATACTAAAgt > 1:751905/1‑140 (MQ=255)
tATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTaaa < 2:82503/133‑1 (MQ=255)
tATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTaaa > 1:82503/1‑133 (MQ=255)
tATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGc > 2:1264235/1‑140 (MQ=255)
ttCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAg > 1:1271681/1‑140 (MQ=255)
ccGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAgcg < 2:932499/140‑1 (MQ=255)
ccGCGCTATCCCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAgcg > 2:638711/1‑140 (MQ=255)
gcgcTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAgcgcg < 2:1084114/140‑1 (MQ=255)
gcgcTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAgcgcg < 1:918982/140‑1 (MQ=255)
tATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAgcgcggcgc < 2:1054362/140‑1 (MQ=255)
tctctcCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGcgcggcgcgg < 1:940946/140‑1 (MQ=255)
tctctcCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGcgcggcgcgg < 1:1264235/140‑1 (MQ=255)
tgtgGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATaa > 1:1252726/1‑140 (MQ=255)
gtgGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATaaa < 2:339478/140‑1 (MQ=255)
ggCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGcgcggcgcgg > 2:734557/1‑130 (MQ=255)
ggCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGcgcggcgcgg < 1:734557/130‑1 (MQ=255)
ggCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACt > 1:699207/1‑140 (MQ=255)
ggCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACt > 2:562197/1‑140 (MQ=255)
ggCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACt > 1:303928/1‑140 (MQ=255)
ggCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACt > 1:349559/1‑140 (MQ=255)
gCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTg < 2:515607/140‑1 (MQ=255)
ttATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGttt > 2:98157/1‑140 (MQ=255)
aTCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTAt > 2:192836/1‑140 (MQ=255)
cTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCaa < 1:720086/140‑1 (MQ=255)
cTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCaa < 2:1252726/140‑1 (MQ=255)
cGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAaca > 2:1155940/1‑140 (MQ=255)
cGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAaca > 1:34348/1‑140 (MQ=255)
aagaagGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACAcc > 1:788630/1‑140 (MQ=255)
agGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTg > 2:1084182/1‑140 (MQ=255)
ttGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCAt < 1:562197/140‑1 (MQ=255)
ccGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATggg > 1:657474/1‑140 (MQ=255)
ccGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATggg > 1:533615/1‑140 (MQ=255)
ggAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCaa > 2:463241/1‑140 (MQ=255)
cTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGc < 2:657474/140‑1 (MQ=255)
cTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGc < 2:381208/140‑1 (MQ=255)
cTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGc < 1:1084182/140‑1 (MQ=255)
gAAAGCCGTAGTGACCATCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGACAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGa < 2:1140342/140‑1 (MQ=255)
gAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGa > 2:96894/1‑140 (MQ=255)
aGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAata > 2:336288/1‑140 (MQ=255)
aGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAata > 1:90847/1‑140 (MQ=255)
gCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAatat < 2:839150/140‑1 (MQ=255)
gTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCa < 1:1155940/140‑1 (MQ=255)
gTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTg < 2:438702/140‑1 (MQ=255)
aTGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGcaca < 2:349559/140‑1 (MQ=255)
tGGCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAg > 1:648714/1‑140 (MQ=255)
ggCAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGa > 1:445609/1‑140 (MQ=255)
cAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGca > 2:760152/1‑134 (MQ=255)
cAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGca < 1:760152/134‑1 (MQ=255)
cAGAAACCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACg > 1:740389/1‑140 (MQ=255)
aCCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAAc > 1:92198/1‑140 (MQ=255)
aCCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAAc > 2:288743/1‑140 (MQ=255)
aCCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAAc > 2:551605/1‑140 (MQ=255)
aCCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAAc > 2:315559/1‑140 (MQ=255)
aCCGCCCGCGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAAc > 2:349478/1‑140 (MQ=255)
aCCGCCCGCGCCGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAAc > 2:520862/1‑140 (MQ=255)
cccgcGCGGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCa > 2:511483/1‑140 (MQ=255)
cgcgcgGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAgg < 2:445609/140‑1 (MQ=255)
cgcgcgGCAGGCATTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAgg < 2:358681/140‑1 (MQ=255)
cgcgGCAGGCATTGCAATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCg < 2:751905/140‑1 (MQ=255)
ggcaggcaTTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCGATg < 1:520862/140‑1 (MQ=255)
caggcaTTACCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCGATGTa < 1:336288/140‑1 (MQ=255)
|
ACGTTGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTGCCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCGATGTA > NC_000913/2853501‑2853760
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
