Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	153	60.1	2040486	99.3%	2026202	138.5

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,926,961	G→A	S218S (TCG→TCA)	ppnN →	nucleotide 5'‑monophosphate nucleosidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,926,961	0	G	A	100.0%	226.9 / NA	65	S218S (TCG→TCA)	ppnN	nucleotide 5'‑monophosphate nucleosidase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (28/37); total (28/37)

CTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAG  >  NC_000913/2926827‑2927094

cTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTAt                                                                                                                                  <  1:550729/140‑1 (MQ=255)

   ggCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATcgc                                                                                                                               >  2:9397/1‑140 (MQ=255)

    gCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATcgcc                                                                                                                              <  1:198753/140‑1 (MQ=255)

    gCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATcgcc                                                                                                                              <  1:73844/140‑1 (MQ=255)

     ccTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATcgccg                                                                                                                             >  1:1017597/1‑140 (MQ=255)

     ccTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATcgccg                                                                                                                             <  1:841609/140‑1 (MQ=255)

         cGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTg                                                                                                                          >  1:144290/1‑139 (MQ=255)

         cGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTg                                                                                                                          <  2:144290/139‑1 (MQ=255)

            gAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAAcc                                                                                                                      <  2:402557/140‑1 (MQ=255)

             aGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGag                                                                                                                        <  2:562114/137‑2 (MQ=255)

             aGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGaa                                                                                                                        >  1:562114/1‑137 (MQ=255)

               cTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGcc                                                                                                                   >  2:419241/1‑140 (MQ=255)

                  aaTATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTaa                                                                                                                >  1:258355/1‑140 (MQ=255)

                       cTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGc                                                                                                           >  1:907475/1‑140 (MQ=255)

                            ccGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTc                                                                                                      >  2:252682/1‑140 (MQ=255)

                            ccGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTc                                                                                                      >  1:739752/1‑140 (MQ=255)

                            ccGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTc                                                                                                      >  1:305636/1‑140 (MQ=255)

                             cGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCa                                                                                                     <  1:911195/140‑1 (MQ=255)

                              ggCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGGGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCaa                                                                                                    >  1:877994/1‑140 (MQ=255)

                                    ggTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAAtt                                                                                              <  1:9397/140‑1 (MQ=255)

                                     gTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTg                                                                                             <  1:419241/140‑1 (MQ=255)

                                     gTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTg                                                                                             <  2:739752/140‑1 (MQ=255)

                                          ggAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatcat                                                                                        <  1:252682/140‑1 (MQ=255)

                                           gAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatcatc                                                                                       <  1:88641/140‑1 (MQ=255)

                                               gATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGc                                                                                   <  1:84471/140‑1 (MQ=255)

                                               gATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGc                                                                                   >  1:996159/1‑140 (MQ=255)

                                                aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTg                                                                                             >  1:522173/1‑129 (MQ=255)

                                                aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTg                                                                                             <  2:522173/129‑1 (MQ=255)

                                                aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGcc                                                                                  >  1:858412/1‑140 (MQ=255)

                                                aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGcc                                                                                  <  2:1017597/140‑1 (MQ=255)

                                                           gATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGaaa                                                                       >  2:617510/1‑140 (MQ=255)

                                                                         cGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCg                                                         >  1:965550/1‑140 (MQ=255)

                                                                         cGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCg                                                         <  1:617510/140‑1 (MQ=255)

                                                                            tCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTACCCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGttt                                                      <  2:877994/140‑1 (MQ=255)

                                                                              ggACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGt                                                    >  2:324772/1‑140 (MQ=255)

                                                                                 cacGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCg                                                 >  2:939967/1‑140 (MQ=255)

                                                                                 cacGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCg                                                 >  2:516615/1‑140 (MQ=255)

                                                                                   cgcgCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTa                                               <  1:351791/140‑1 (MQ=255)

                                                                                      gcagcaGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCg                                            >  2:837716/1‑140 (MQ=255)

                                                                                       cagcagCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGc                                           <  2:996159/140‑1 (MQ=255)

                                                                                        agcagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGCTCAACGAATTGATCATCACGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCt                                          <  2:907475/140‑1 (MQ=255)

                                                                                          cagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCt                                          >  1:546714/1‑138 (MQ=255)

                                                                                          cagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCt                                          <  2:546714/138‑1 (MQ=255)

                                                                                          cagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCa                                        <  2:258355/140‑1 (MQ=255)

                                                                                          cagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCa                                        <  2:965550/140‑1 (MQ=255)

                                                                                          cagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCa                                        <  1:516615/140‑1 (MQ=255)

                                                                                          cagcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCa                                        >  2:622935/1‑140 (MQ=255)

                                                                                            gcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACg                                      <  2:987368/140‑1 (MQ=255)

                                                                                            gcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACg                                      <  1:489829/140‑1 (MQ=255)

                                                                                            gcGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACg                                      <  1:939967/140‑1 (MQ=255)

                                                                                               ttACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTa                                   >  2:236496/1‑140 (MQ=255)

                                                                                               ttACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTa                                   <  1:429215/140‑1 (MQ=255)

                                                                                                          gTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTc                        >  2:692235/1‑140 (MQ=255)

                                                                                                          gTCGTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTc                        >  2:789630/1‑140 (MQ=255)

                                                                                                             gTTTTATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCt                     >  2:887287/1‑140 (MQ=255)

                                                                                                               tttATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTgg                   <  1:51839/140‑1 (MQ=255)

                                                                                                               tttATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTgg                   <  1:622935/140‑1 (MQ=255)

                                                                                                               tttATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTgg                   <  2:858412/140‑1 (MQ=255)

                                                                                                                ttATTGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGc                  <  1:1001820/140‑1 (MQ=255)

                                                                                                                   ttGGTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGgt               <  1:837716/140‑1 (MQ=255)

                                                                                                                     ggTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTgg                   >  1:46843/1‑134 (MQ=255)

                                                                                                                     ggTATGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTgg                   <  2:46843/134‑1 (MQ=255)

                                                                                                                        aTGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTggg          <  1:342122/140‑1 (MQ=255)

                                                                                                                        aTGACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTggg          <  1:324772/140‑1 (MQ=255)

                                                                                                                          gACAGAGCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTa        <  1:789630/140‑1 (MQ=255)

                                                                                                                                gCCGTCAATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTGTCTTCCCTGGCGGTGTGGGTACGGCag  >  2:784089/1‑140 (MQ=255)

CTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAG  >  NC_000913/2926827‑2927094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A