Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F28 I1 R1 153 60.1 2040486 99.3% 2026202 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,702,492 A→G L126P (CTG→CCG)  dppF ← dipeptide ABC transporter ATP binding subunit DppF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,702,4920AG100.0% 205.6 / NA 58L126P (CTG→CCG) dppFdipeptide ABC transporter ATP binding subunit DppF
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (29/29);  total (29/29)

GCGATACGCTGACGCTGACCGCCGGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCAGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGATCCTGCCCCTG  >  NC_000913/3702357‑3702625
                                                                                                                                       |                                                                                                                                     
gcgatACGCTGACGCTGACCGCCGGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCTGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGcggcgg                                                                                                                                   <  1:711306/140‑1 (MQ=255)
gcgatACGCTGACGCTGACCGCCGGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGcggcgg                                                                                                                                   <  1:62658/140‑1 (MQ=255)
gcgatACGCTGACGCTGACCGCCGGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGcggcgg                                                                                                                                   <  2:510301/140‑1 (MQ=255)
  gatACGCTGACGCTGACCGCCGGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGct                                                                                                                                 >  1:948066/1‑140 (MQ=255)
                     ccgGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGAc                                                                                                              >  2:143687/1‑140 (MQ=255)
                        gagaACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACttt                                                                                                           <  2:297016/140‑1 (MQ=255)
                           aaCATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTTCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACtttttt                                                                                                        >  1:72514/1‑140 (MQ=255)
                                atGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTAcgcg                                                                                                   >  1:278305/1‑140 (MQ=255)
                                 tGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCgg                                                                                                  <  1:446587/140‑1 (MQ=255)
                                   cGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGAt                                                                                                <  2:137713/140‑1 (MQ=255)
                                     gATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTc                                                                                              >  1:115826/1‑140 (MQ=255)
                                      aTAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCa                                                                                             >  1:401400/1‑140 (MQ=255)
                                         gCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCg                                                                                          <  2:69123/140‑1 (MQ=255)
                                         gCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCg                                                                                          <  2:730465/140‑1 (MQ=255)
                                         gCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCg                                                                                          <  1:743426/140‑1 (MQ=255)
                                         gCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCg                                                                                          <  2:106257/140‑1 (MQ=255)
                                          cGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGa                                                                                         >  2:835385/1‑140 (MQ=255)
                                          cGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGa                                                                                         >  2:77064/1‑140 (MQ=255)
                                          cGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGa                                                                                         >  2:343314/1‑140 (MQ=255)
                                            gTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAAc                                                                                       <  1:143687/140‑1 (MQ=255)
                                                tAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTTCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTa                                                                                   <  2:72514/140‑1 (MQ=255)
                                                tAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTa                                                                                   <  1:343314/140‑1 (MQ=255)
                                                tAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTa                                                                                   <  1:77064/140‑1 (MQ=255)
                                                 aGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTaa                                                                                  >  2:469318/1‑140 (MQ=255)
                                                     cTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGt                                                                              <  2:422430/140‑1 (MQ=255)
                                                     cTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGt                                                                              >  1:437457/1‑140 (MQ=255)
                                                     cTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGt                                                                              >  1:483134/1‑140 (MQ=255)
                                                      tCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCg                                                                                          <  2:146484/127‑1 (MQ=255)
                                                      tCGGTTTTCAGGCCGACTTCCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCg                                                                                          >  1:146484/1‑127 (MQ=255)
                                                       cGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTa                                                                                   >  1:693933/1‑133 (MQ=255)
                                                       cGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTa                                                                                   <  2:693933/133‑1 (MQ=255)
                                                         gTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTg                                                                          >  2:536056/1‑140 (MQ=255)
                                                          ttttCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTgg                                                                         >  1:22962/1‑140 (MQ=255)
                                                             tCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTaa                                                                                  >  2:579237/1‑128 (MQ=255)
                                                             tCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTaa                                                                                  <  1:579237/128‑1 (MQ=255)
                                                             tCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGGTCttccag                                                                      <  1:370214/140‑6 (MQ=255)
                                                               aGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGAc                                                                    <  2:278305/140‑1 (MQ=255)
                                                               aGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGAc                                                                    <  1:734344/140‑1 (MQ=255)
                                                                                catcGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGcc                                                   <  2:401400/140‑1 (MQ=255)
                                                                                catcGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGcc                                                   >  2:805/1‑140 (MQ=255)
                                                                                         ggCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTc                                                       >  1:262648/1‑127 (MQ=255)
                                                                                         ggCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTc                                                       <  2:262648/127‑1 (MQ=255)
                                                                                         ggCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCt                                          >  2:599595/1‑140 (MQ=255)
                                                                                           cTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTg                                                     >  2:163605/1‑127 (MQ=255)
                                                                                           cTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTg                                                     <  1:163605/127‑1 (MQ=255)
                                                                                           cTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTc                                        >  1:995147/1‑140 (MQ=255)
                                                                                             ttttCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCCGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTg                                      <  1:835385/140‑1 (MQ=255)
                                                                                                  ccGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCt                                 <  1:49578/140‑1 (MQ=255)
                                                                                                   cGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTg                                <  1:599595/140‑1 (MQ=255)
                                                                                                        cTGTTCTTTGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGAt                           <  1:536056/140‑1 (MQ=255)
                                                                                                              tttGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCt                     <  2:995147/140‑1 (MQ=255)
                                                                                                               ttGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCtt                    >  1:547625/1‑140 (MQ=255)
                                                                                                                tGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTa                   >  2:418913/1‑140 (MQ=255)
                                                                                                                tGCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTa                   >  1:926688/1‑140 (MQ=255)
                                                                                                                 gCTTAAGCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTAGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTaa                  >  1:351946/1‑140 (MQ=255)
                                                                                                                       gCTGGTGTTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGAt            >  2:522259/1‑140 (MQ=255)
                                                                                                                           gtgtTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGATCCTg        >  1:279731/1‑140 (MQ=255)
                                                                                                                            tgtTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGATCCTGc       >  1:261359/1‑140 (MQ=255)
                                                                                                                             gtTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGATCCTGcc      <  2:115826/140‑1 (MQ=255)
                                                                                                                             gtTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGATCCTGcc      <  2:716679/140‑1 (MQ=255)
                                                                                                                             gtTGATCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCNTAAGCAGATCCTGcc      <  1:718318/140‑1 (MQ=255)
                                                                                                                                 aTCAGCGGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGCGCTTAAGCAGATCCTGCCCCTg  >  1:719868/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                     
GCGATACGCTGACGCTGACCGCCGGAGAACATATGCGGATAGCGGTCATAGTGCTCGGTTTTCAGGCCGACTTTCGCCATCATCGACAGGGCTTTTTCCCGACGCTGTTCTTTGCTTAAGCTGGTGTTGATCAGCAGCGGCTCTTCAAGAATTTGCCCGACTTTTTTACGCGGATTCAGCGAACCGTAAGGGTTCTGGAAGACGATCTGGATTTTCTGCCGACGCAGCTTCTGCGCCTGCGGATCGTGCTTAAGCAGATCCTGCCCCTG  >  NC_000913/3702357‑3702625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A