Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	153	60.1	2040486	99.3%	2026202	138.5

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,097,247	A→G	C68R (TGC→CGC)	rhaB ←	rhamnulokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,097,247	0	A	G	100.0%	229.6 / NA	64	C68R (TGC→CGC)	rhaB	rhamnulokinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (27/37); total (27/37)

GCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCACACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTC  >  NC_000913/4097112‑4097379

gcgcCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCAcc                                                                                                                                  <  1:794747/140‑1 (MQ=255)

gcgcCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCAcc                                                                                                                                  <  2:621709/140‑1 (MQ=255)

    cATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGt                                                                                                                              <  1:411968/140‑1 (MQ=255)

     aTTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGtt                                                                                                                             <  2:511606/140‑1 (MQ=255)

      ttAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGttt                                                                                                                            >  1:186358/1‑140 (MQ=255)

              ttGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAg                                                                                                                    >  1:178220/1‑140 (MQ=255)

                ggTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGc                                                                                                                  >  1:1016030/1‑140 (MQ=255)

                     ggCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATg                                                                                                             >  1:783165/1‑140 (MQ=255)

                     ggCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATg                                                                                                             >  1:427541/1‑140 (MQ=255)

                      gCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATgg                                                                                                            <  1:196748/140‑1 (MQ=255)

                       cTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGc                                                                                                           <  1:993281/140‑1 (MQ=255)

                       cTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGc                                                                                                           <  1:486264/140‑1 (MQ=255)

                              gATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCa                                                                                                    <  1:14120/140‑1 (MQ=255)

                              gATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCa                                                                                                    <  1:188770/140‑1 (MQ=255)

                                 aaGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAgg                                                                                                 <  2:47788/140‑1 (MQ=255)

                                   gCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCt                                                                                               <  1:737608/140‑1 (MQ=255)

                                      aCGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATc                                                                                            >  1:199709/1‑140 (MQ=255)

                                        gggCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCca                                                                                          <  1:3534/140‑1 (MQ=255)

                                        gggCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCca                                                                                          <  1:402650/140‑1 (MQ=255)

                                        gggCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCca                                                                                          <  2:199709/140‑1 (MQ=255)

                                        gggCAGGCACACACGCTGATCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCca                                                                                          <  2:463290/140‑1 (MQ=255)

                                          gCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCcaca                                                                                        <  2:783165/140‑1 (MQ=255)

                                            aGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATc                                                                                      <  2:427541/140‑1 (MQ=255)

                                               cccACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCa                                                                                   <  2:178220/140‑1 (MQ=255)

                                               cccACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCa                                                                                   <  2:520607/140‑1 (MQ=255)

                                                 cacaCGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATACTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAgg                                                                                 <  1:190230/140‑1 (MQ=255)

                                                 cacaCGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAAAGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAgg                                                                                 >  1:308037/1‑140 (MQ=255)

                                                   cacGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTg                                                                               >  1:31302/1‑140 (MQ=255)

                                                      gCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACa                                                                            <  1:168839/140‑1 (MQ=255)

                                                        tGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATa                                                                          <  2:517323/140‑1 (MQ=255)

                                                         gACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCTTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAg                                                                         <  1:230355/140‑1 (MQ=255)

                                                             cTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGt                                                                     <  2:186358/140‑1 (MQ=255)

                                                              tGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGtt                                                                    >  2:563907/1‑140 (MQ=255)

                                                                ttGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGt                                                                     >  1:156491/1‑137 (MQ=255)

                                                                ttGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGt                                                                     <  2:156491/137‑1 (MQ=255)

                                                                  ggTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGa                                                                <  2:144600/140‑1 (MQ=255)

                                                                    tCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACt                                                              >  1:505146/1‑140 (MQ=255)

                                                                      gAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGt                                                                     >  2:799113/1‑131 (MQ=255)

                                                                      gAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGt                                                                     <  1:799113/131‑1 (MQ=255)

                                                                          agcaCAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAg                                                        >  1:550846/1‑140 (MQ=255)

                                                                             acaAAGTCCACGCCCCAGGTATCAATCCCAAAGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGccc                                                     <  2:308037/140‑1 (MQ=255)

                                                                                      aCGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTaaa                                            >  1:269361/1‑140 (MQ=255)

                                                                                      aCGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTaaa                                            >  2:369267/1‑140 (MQ=255)

                                                                                      aCGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTaaa                                            >  1:840209/1‑140 (MQ=255)

                                                                                        gCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCa                                                    <  1:211103/130‑1 (MQ=255)

                                                                                        gCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCa                                                    >  2:211103/1‑130 (MQ=255)

                                                                                         ccccAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACg                                         >  1:862139/1‑140 (MQ=255)

                                                                                           ccAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGAt                                       <  2:1016030/140‑1 (MQ=255)

                                                                                             aGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATgg                                     >  2:180169/1‑140 (MQ=255)

                                                                                                     aTCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTcgcg                             <  2:31302/140‑1 (MQ=255)

                                                                                                      tCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGa                                        >  1:616676/1‑128 (MQ=255)

                                                                                                      tCCCAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGa                                        <  2:616676/128‑1 (MQ=255)

                                                                                                         cAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGc                         >  1:580585/1‑140 (MQ=255)

                                                                                                         cAATGCTATCGATACGAATCCCTTCCTCGCGCACCTTGCTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGc                         >  2:867659/1‑140 (MQ=255)

                                                                                                          aaTGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTcgcg                             <  2:314572/135‑1 (MQ=255)

                                                                                                          aaTGCTATCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTcgcg                             >  1:314572/1‑135 (MQ=255)

                                                                                                                aTCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGc                  >  2:53443/1‑140 (MQ=255)

                                                                                                                 tCGATACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCt                 >  2:374302/1‑140 (MQ=255)

                                                                                                                    aTACGAATCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCg              <  1:53443/140‑1 (MQ=255)

                                                                                                                           tCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCa       <  2:505146/140‑1 (MQ=255)

                                                                                                                           tCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCa       <  2:1009970/140‑1 (MQ=255)

                                                                                                                           tCCCTTCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAAGCTATCCACATCCCAGGTGACATAGCCGTTCTCACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCa       >  1:936720/1‑140 (MQ=255)

                                                                                                                               ttCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCt   <  2:924047/140‑1 (MQ=255)

                                                                                                                                tCCTCGCGCACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTc  >  2:193410/1‑140 (MQ=255)

GCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATACGAATCCCTTCCTCGCACACCTTGTTTAATCCAAGGCGAATGGCACTTTCAAGGCTATCCACATCCCAGGTGACATAGCCGTTCTGACTATGCAGCCCATTGTTAAAACGATGGATTTCGCGCAGCGTCAGGCTGCGGCATTCACGCTC  >  NC_000913/4097112‑4097379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A