Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F28 I1 R1
|
151 |
83.1 |
2798978 |
99.4% |
2782184 |
139.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,092,566 |
(G)6→5 |
coding (689/951 nt) |
gshB → |
glutathione synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,092,561 | 0 | G | . | 100.0%
| 356.3
/ NA
| 83 | coding (684/951 nt) | gshB | glutathione synthetase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (50/33); total (50/33) |
TGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTG > NC_000913/3092422‑3092693
|
tGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAg < 1:487040/140‑1 (MQ=255)
ccGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAgggggcg < 1:729967/140‑3 (MQ=255)
gAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAgggggcgaa > 1:276726/1‑136 (MQ=255)
aaccccTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGaaa < 2:382069/137‑1 (MQ=255)
accccTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAAc < 2:369439/138‑1 (MQ=255)
gactgaGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTgg > 1:656587/1‑140 (MQ=255)
gaGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAAt < 1:1105133/140‑1 (MQ=255)
aGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATc > 2:1156553/1‑140 (MQ=255)
aGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATc > 2:196657/1‑140 (MQ=255)
aGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATc > 1:486688/1‑140 (MQ=255)
gCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCt > 2:362889/1‑140 (MQ=255)
gCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCt > 1:1384235/1‑140 (MQ=255)
cATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTg > 2:899001/1‑140 (MQ=255)
cATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTg > 1:1132624/1‑140 (MQ=255)
cATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTg > 2:716525/1‑140 (MQ=255)
gCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTg > 1:671392/1‑140 (MQ=255)
aCTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGcc < 1:513550/140‑1 (MQ=255)
cTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCg < 1:34885/140‑1 (MQ=255)
tCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCgg > 2:668569/1‑140 (MQ=255)
gCTACTGTATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCggtg > 1:14473/1‑140 (MQ=255)
gCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCggtg > 1:678008/1‑140 (MQ=255)
tACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCggtggt < 2:569395/140‑1 (MQ=255)
cTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCggtggt < 1:3142/138‑1 (MQ=255)
cTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCggtggt > 2:3142/1‑138 (MQ=255)
ggCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGa > 2:1006556/1‑140 (MQ=255)
cgcAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAAc > 2:355176/1‑140 (MQ=255)
cgcAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAAc > 2:72752/1‑140 (MQ=255)
cgcAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAAc > 1:406243/1‑140 (MQ=255)
cgcAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCACGGTGAAc > 2:50755/1‑140 (MQ=255)
cgcAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTAGTCGCGGt < 2:215249/136‑1 (MQ=255)
cgcAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTAGTCGCGGt > 1:215249/1‑136 (MQ=255)
cAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCt > 1:384404/1‑140 (MQ=255)
aaaaTTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTc > 1:419395/1‑140 (MQ=255)
aaTTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGt > 1:1348826/1‑140 (MQ=255)
aTTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTc < 2:276726/140‑1 (MQ=255)
ccTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCt > 2:217351/1‑140 (MQ=255)
tGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGa < 2:419395/140‑1 (MQ=255)
ggCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGaaa > 2:80679/1‑140 (MQ=255)
ggCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGaaa > 1:1075809/1‑140 (MQ=255)
ggCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGaaa > 1:1345057/1‑140 (MQ=255)
ggCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGaa > 1:356999/1‑139 (MQ=255)
ggCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGaa < 2:356999/139‑1 (MQ=255)
cGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAAt < 2:384404/140‑1 (MQ=255)
gACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATc < 1:899001/140‑1 (MQ=255)
aCGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCg > 1:663426/1‑140 (MQ=255)
cgcgTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTTGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGt < 2:245284/140‑1 (MQ=255)
gtggtggATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCggg < 2:185510/140‑1 (MQ=255)
tGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTTGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCt < 2:419119/140‑1 (MQ=255)
tGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCt > 1:859284/1‑140 (MQ=255)
tGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCt > 2:435541/1‑140 (MQ=255)
gCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTga > 1:1086811/1‑140 (MQ=255)
gCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTga > 2:815932/1‑140 (MQ=255)
gCGAGCCGGTACCGTACTGCCT‑GCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTgaa > 1:1257903/1‑140 (MQ=255)
cGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTgaa > 2:1126056/1‑140 (MQ=255)
cGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTgaaagaaa > 1:1267651/1‑140 (MQ=255)
cGGTACCGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTgaaagaaa > 2:587317/1‑140 (MQ=255)
ccGTACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAggg < 2:406243/140‑1 (MQ=255)
tACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTgaa > 2:202240/1‑127 (MQ=255)
tACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTgaa < 1:202240/127‑1 (MQ=255)
tACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTg > 2:1373208/1‑140 (MQ=255)
tACTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTg > 1:498275/1‑140 (MQ=255)
cTGCCTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAt < 2:1348826/140‑1 (MQ=255)
ccTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAtttt > 1:272312/1‑140 (MQ=255)
ccTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAtttt > 2:437740/1‑140 (MQ=255)
ccTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAtttt > 1:558315/1‑140 (MQ=255)
ccTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAtttt > 2:723172/1‑140 (MQ=255)
ccTGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGAtttt > 2:106234/1‑140 (MQ=255)
tGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttg > 1:317229/1‑140 (MQ=255)
tGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttg < 2:671392/140‑1 (MQ=255)
tGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttg < 2:317229/140‑1 (MQ=255)
tGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttg < 2:1086811/140‑1 (MQ=255)
tGGCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttg > 2:562421/1‑140 (MQ=255)
ctgcgcGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttg < 2:1257903/138‑1 (MQ=255)
ggCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttgt < 1:1006556/140‑1 (MQ=255)
ggCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttgt > 1:547919/1‑140 (MQ=255)
ggCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttgt < 1:587317/140‑1 (MQ=255)
ggCGCGTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTttgt < 1:815932/140‑1 (MQ=255)
gcgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTgg < 2:558315/140‑1 (MQ=255)
gcgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTgg < 1:355176/140‑1 (MQ=255)
cgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGt < 1:268265/140‑1 (MQ=255)
cgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGt < 2:656587/140‑1 (MQ=255)
cgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGt < 1:716525/140‑1 (MQ=255)
cgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGt < 2:1075809/140‑1 (MQ=255)
cgTATTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGt < 1:850972/140‑1 (MQ=255)
aTTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTg > 2:401088/1‑140 (MQ=255)
aTTCCGCA‑GGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTg > 2:752768/1‑140 (MQ=255)
|
TGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTG > NC_000913/3092422‑3092693
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
