Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
138 |
91.1 |
3071990 |
99.2% |
3047414 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
652,637 |
T→C |
F135L (TTC→CTC) |
dpiB → |
sensory histidine kinase DpiB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 652,637 | 0 | T | C | 100.0%
| 283.2
/ NA
| 81 | F135L (TTC→CTC) | dpiB | sensory histidine kinase DpiB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (40/41); total (40/41) |
TACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAGT > NC_000913/652500‑652769
|
tACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTc > 1:582692/1‑140 (MQ=255)
tACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTc > 1:823666/1‑140 (MQ=255)
aCAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCa < 2:1192326/140‑1 (MQ=255)
aCAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCa < 2:1524589/140‑1 (MQ=255)
cAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCAt > 1:448286/1‑140 (MQ=255)
tACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTTGAGAAAGGGGAGAGCTACCTCATTAcc < 2:847231/136‑1 (MQ=255)
tACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTTGAGAAAGGGGAGAGCTACCTCATTAcc > 1:847231/1‑136 (MQ=255)
tACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGa < 2:678155/140‑1 (MQ=255)
aCCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGaa < 2:1443335/140‑1 (MQ=255)
gATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAgg < 1:1087993/140‑1 (MQ=255)
aTTTTGATTATGTGGTTATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAggg < 1:402169/140‑1 (MQ=255)
aTTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAggg > 1:730937/1‑140 (MQ=255)
tttGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAg > 1:535166/1‑136 (MQ=255)
tttGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAg < 2:535166/136‑1 (MQ=255)
tttGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGCTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTc > 1:361322/1‑140 (MQ=255)
attGATTATGTGGTGATTGGGGACCGGCACTCAATCCCCCTTTACCATCCTAATCCGTAGAAAATTGGTTATCCTATGCACTTCACCAAACAGGGCGCGCTGGAGAGAGGGGAGAGCTACCTCATTACCGGGAAAgggcc > 2:1479105/2‑138 (MQ=255)
ttGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCa < 2:653069/140‑1 (MQ=255)
tGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCaa < 2:448286/140‑1 (MQ=255)
gATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAAt < 1:153802/140‑1 (MQ=255)
gtggtgATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGTAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGAt > 1:420020/1‑140 (MQ=255)
aTTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGAt > 2:1008892/1‑140 (MQ=255)
aTTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGAt > 1:1312567/1‑140 (MQ=255)
tGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgc > 2:375582/1‑140 (MQ=255)
ggggACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcg > 2:372702/1‑140 (MQ=255)
ggggACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcg > 1:567095/1‑140 (MQ=255)
gggACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcgc > 1:447490/1‑140 (MQ=255)
gggACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcgc > 2:1037724/1‑140 (MQ=255)
ggACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATgcgcg > 2:813532/1‑140 (MQ=255)
ccGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCa < 2:625664/140‑1 (MQ=255)
ccGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCa > 1:663273/1‑140 (MQ=255)
gCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCaaaa > 2:509467/1‑140 (MQ=255)
gCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCaaaa > 1:1168001/1‑140 (MQ=255)
aCTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGAGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACg < 2:341873/140‑1 (MQ=255)
cTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGc < 1:755612/140‑1 (MQ=255)
cTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGc > 2:443669/1‑140 (MQ=255)
cGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCa < 2:361322/140‑1 (MQ=255)
cGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCa < 1:375582/140‑1 (MQ=255)
gATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCaa < 2:663273/140‑1 (MQ=255)
gATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCaa > 1:1227696/1‑140 (MQ=255)
cGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCtt < 2:84124/140‑1 (MQ=255)
ccTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATgg > 2:796446/1‑140 (MQ=255)
aTCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACg > 1:224661/1‑132 (MQ=255)
aTCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACg < 2:224661/132‑1 (MQ=255)
aTCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGaaaa > 1:810684/1‑140 (MQ=255)
ggAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCa < 2:447490/140‑1 (MQ=255)
gagaAAATTGGTTATCCTATGTAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCAt < 2:420020/140‑1 (MQ=255)
gagaAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCGATCTTTGATGACGATGGAAAAGTCAt < 1:856370/140‑1 (MQ=255)
agaAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATc > 2:1324209/1‑140 (MQ=255)
gaAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCg > 2:977536/1‑140 (MQ=255)
aaaTTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGc < 1:372702/140‑1 (MQ=255)
aaaTTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGc < 1:977536/140‑1 (MQ=255)
ttGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCgtg < 2:1168001/140‑1 (MQ=255)
gTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCgtggtg > 1:658931/1‑140 (MQ=255)
tATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTc < 1:1008892/140‑1 (MQ=255)
tATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTc < 2:730937/140‑1 (MQ=255)
aTCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTTCCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGGGTCg < 2:810684/140‑1 (MQ=255)
aTGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTgg < 1:796446/140‑1 (MQ=255)
gCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCt < 2:823666/140‑1 (MQ=255)
gCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCt < 2:582692/140‑1 (MQ=255)
aGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTAc < 1:1324209/140‑1 (MQ=255)
ttCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTGCCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGGAAAGTCATCGGCGTGGTGTCGATTGGCTACCt > 2:1354186/1‑140 (MQ=255)
ttCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCt > 2:1239101/1‑140 (MQ=255)
ttCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCt > 1:975421/1‑140 (MQ=255)
ttCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCt > 1:940868/1‑140 (MQ=255)
tCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTg < 1:813532/140‑1 (MQ=255)
cACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCg > 2:275105/1‑127 (MQ=255)
cACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCg < 1:275105/127‑1 (MQ=255)
cACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGAt < 1:1310960/129‑1 (MQ=255)
cACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGAt > 2:1310960/1‑129 (MQ=255)
cAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGa > 2:663893/1‑140 (MQ=255)
cAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGa > 1:1200499/1‑140 (MQ=255)
aCAGGGCGCGCTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTa > 2:1119280/1‑140 (MQ=255)
gcTGGAGAAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATa > 2:230691/1‑140 (MQ=255)
agaAAGGGGAGAGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTgg < 1:1354186/140‑1 (MQ=255)
gagaGCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGa < 1:1119280/140‑1 (MQ=255)
agagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCggg < 2:1041519/135‑1 (MQ=255)
agagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCggg > 1:1041519/1‑135 (MQ=255)
agagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCt > 1:1273166/1‑137 (MQ=255)
agagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCt < 2:1273166/137‑1 (MQ=255)
agagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAg > 1:851951/1‑140 (MQ=255)
agagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAg < 1:1037724/140‑1 (MQ=255)
gagCTACCTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAGt < 2:1312567/140‑1 (MQ=255)
|
TACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAGT > NC_000913/652500‑652769
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
