Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,103,089 |
T→C |
pseudogene (301/446 nt) |
wbbL ← |
interrupted rhamnosyltransferase WbbL |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,103,089 | 0 | T | C | 100.0%
| 548.2
/ NA
| 144 | pseudogene (301/446 nt) | wbbL | interrupted rhamnosyltransferase WbbL |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/74); total (70/74) |
Only 100 of 145 total aligned reads displayed.
AACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACACCTCC > NC_000913/2102953‑2103221
|
aaCATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATG‑ACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCa > 2:1514296/1‑138 (MQ=255)
aCATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCa > 1:784000/1‑138 (MQ=255)
aCATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCa > 2:1229572/1‑138 (MQ=255)
aCATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCa > 2:1270706/1‑138 (MQ=255)
aCATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCa > 2:598959/1‑138 (MQ=255)
aCATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCa > 1:364656/1‑138 (MQ=255)
cATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAg > 2:849924/1‑138 (MQ=255)
cATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAg < 2:1407510/138‑1 (MQ=255)
cATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAg > 2:1520316/1‑138 (MQ=255)
aTGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAat > 2:1131843/1‑138 (MQ=255)
aTGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAat > 1:283886/1‑138 (MQ=255)
gACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAatca < 2:885563/138‑1 (MQ=255)
acacAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAatcat < 2:448549/138‑1 (MQ=255)
acacAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAatcat < 2:27856/138‑1 (MQ=255)
cacaATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAatcatc < 2:375456/138‑1 (MQ=255)
caATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAg < 1:833488/127‑1 (MQ=255)
caATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAg > 2:833488/1‑127 (MQ=255)
caATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATcatcat > 2:851835/1‑138 (MQ=255)
caATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATcatcat > 2:1661305/1‑138 (MQ=255)
caATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATcatcat > 2:32749/1‑138 (MQ=255)
aaTAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATg < 1:499441/138‑1 (MQ=255)
aaaaTCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCtt > 2:1779804/1‑138 (MQ=255)
aaaTCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCaa < 1:637788/125‑1 (MQ=255)
aaaTCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCaa > 2:637788/1‑125 (MQ=255)
aaaTCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGc < 1:1658375/135‑1 (MQ=255)
aaaTCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGc > 2:1658375/1‑135 (MQ=255)
aaGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATgatgat > 2:599740/1‑138 (MQ=255)
aaGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATgatgat < 2:553949/138‑1 (MQ=255)
gAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGAt > 1:198621/1‑138 (MQ=255)
tCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCaaaaa < 2:1724556/138‑1 (MQ=255)
tCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCaaaaa < 1:962509/138‑1 (MQ=255)
ttACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACa < 2:198621/138‑1 (MQ=255)
cGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACaaaa < 2:1116417/138‑1 (MQ=255)
cGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACaaaa < 1:16900/138‑1 (MQ=255)
aatCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAat < 1:849924/138‑1 (MQ=255)
tAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAatcatcatc < 1:128651/138‑1 (MQ=255)
aaGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCGTCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAatcatcatc < 1:248483/136‑1 (MQ=255)
aaGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCGTCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAatcatcatc > 2:248483/1‑136 (MQ=255)
aaGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTg > 2:832032/1‑138 (MQ=255)
aaGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTg < 2:1167862/138‑1 (MQ=255)
aaGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTg > 1:1043796/1‑138 (MQ=255)
aaGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTg > 1:617965/1‑138 (MQ=255)
gATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCg > 1:789682/1‑138 (MQ=255)
aTTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCgg < 2:1116229/138‑1 (MQ=255)
ttCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGt > 1:864326/1‑138 (MQ=255)
ttCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGt > 1:17582/1‑138 (MQ=255)
cGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCt > 1:95650/1‑138 (MQ=255)
gCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCta > 2:1215665/1‑138 (MQ=255)
tCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTatat < 1:1753880/138‑1 (MQ=255)
tCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTatat < 2:17582/138‑1 (MQ=255)
ctcGGAACAGGCATAATG‑ACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTc < 1:1514296/138‑1 (MQ=255)
gAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTc < 2:1763666/135‑1 (MQ=255)
gAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTc > 1:1763666/1‑135 (MQ=255)
gTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCAcc > 2:1016254/1‑138 (MQ=255)
aCTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGc < 1:1215665/138‑1 (MQ=255)
aCTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGc < 2:1751686/138‑1 (MQ=255)
aCTAAAAGCACAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATAATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGc < 2:1586683/138‑1 (MQ=255)
tAAAAGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCaa < 1:420884/138‑1 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCGTCTGCGGGTCTATATTTTTCCTTTACa < 1:737658/124‑1 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCGTCTGCGGGTCTATATTTTTCCTTTACa > 2:737658/1‑124 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 1:1022508/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 1:1592373/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 2:336011/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 2:437539/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 1:1465745/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 2:777180/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 1:1348930/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 2:762819/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 2:62379/1‑138 (MQ=255)
aaaaGCATAACGCTTACTTTCGACATATTTAATATATGCAAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAat > 2:792971/1‑138 (MQ=255)
aaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGcc > 1:731219/1‑129 (MQ=255)
aaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGcc < 2:731219/129‑1 (MQ=255)
aaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAata > 1:149414/1‑138 (MQ=255)
aaaGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAata > 1:457222/1‑138 (MQ=255)
aGCATAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAAtatt > 2:1295214/1‑138 (MQ=255)
aTAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAAtattatt > 2:190537/1‑138 (MQ=255)
tAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAAtattatta < 1:762819/138‑1 (MQ=255)
tAACGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAAtattatta < 1:185000/138‑1 (MQ=255)
aaCGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAatat < 1:1605534/132‑1 (MQ=255)
aaCGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAatat > 2:1605534/1‑132 (MQ=255)
aaCGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAAtattattat > 1:1611589/1‑138 (MQ=255)
aCGCTTACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAAtattattatt < 2:789682/138‑1 (MQ=255)
tACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGAc < 1:832032/138‑1 (MQ=255)
tACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGAc < 2:149414/138‑1 (MQ=255)
tACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGAc < 2:1174616/138‑1 (MQ=255)
tACTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGAc < 1:598959/138‑1 (MQ=255)
aCTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGAcc < 1:1131843/138‑1 (MQ=255)
aCTTTCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGAc > 2:933070/1‑137 (MQ=255)
tttCGACATATTTAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCaa > 1:1160907/1‑138 (MQ=255)
tttAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCaa > 1:116452/1‑128 (MQ=255)
tttAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATac < 1:1229572/138‑1 (MQ=255)
ttAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATaca < 2:782103/138‑1 (MQ=255)
ttAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATaca < 1:196968/138‑1 (MQ=255)
ttAATATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATaca < 2:1348930/138‑1 (MQ=255)
aaTATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACAcc < 1:1295214/138‑1 (MQ=255)
aaTATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACAcc < 2:457222/138‑1 (MQ=255)
aaTATATGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACAcc < 1:777180/138‑1 (MQ=255)
tatatGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACACCTc < 1:887549/138‑1 (MQ=255)
tatatGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACACCTc < 2:1022508/138‑1 (MQ=255)
atatGCCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACACCTcc < 1:1429513/138‑1 (MQ=255)
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AACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACATACGCCACCGCAATATTATTATTATGACCAAAGCCGTATACACCTCC > NC_000913/2102953‑2103221
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
