Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,762,118 |
T→C |
intergenic (‑163/‑65) |
yibF ← / → rhsA |
glutathione transferase‑like protein YibF/rhs element protein RhsA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,762,118 | 0 | T | C | 100.0%
| 280.6
/ NA
| 75 | intergenic (‑163/‑65) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/31); total (44/31) |
CAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCA > NC_000913/3761984‑3762251
|
cAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGctctct < 2:772614/138‑1 (MQ=255)
tATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTtat < 2:854571/138‑1 (MQ=255)
aTGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTtata > 2:78221/1‑138 (MQ=255)
aTGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTtata > 1:1211023/1‑138 (MQ=255)
tGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGGGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTg > 1:1014404/1‑138 (MQ=255)
tGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAg > 1:266579/1‑138 (MQ=255)
aTGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTtat < 1:478989/126‑1 (MQ=255)
aTGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTtat > 2:478989/1‑126 (MQ=255)
aTGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAggg > 1:1171261/1‑138 (MQ=255)
aTGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAggg > 1:1233664/1‑138 (MQ=255)
aTGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAggg > 1:1064373/1‑138 (MQ=255)
aTGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAggg > 2:325028/1‑138 (MQ=255)
tGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGt < 2:707903/138‑1 (MQ=255)
gAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGt < 2:224310/130‑1 (MQ=255)
gAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGt > 1:224310/1‑130 (MQ=255)
aaaaaGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCg > 2:873387/1‑138 (MQ=255)
aaaaaGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCg > 1:1794567/1‑138 (MQ=255)
aaaaaGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCg > 2:813912/1‑138 (MQ=255)
aaGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCt < 2:1149995/138‑1 (MQ=255)
aaGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCt < 2:1794567/138‑1 (MQ=255)
gggCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGt > 2:851157/1‑138 (MQ=255)
gAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTcagca > 1:160906/1‑138 (MQ=255)
tGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATa > 1:1352469/1‑138 (MQ=255)
tGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATa > 1:738932/1‑138 (MQ=255)
gATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATaa < 1:325028/138‑1 (MQ=255)
tttGTTACTTCCAAATAAATCACATATTTATC‑‑GGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATa > 1:1589375/1‑138 (MQ=255)
gTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATaa < 2:1171261/138‑1 (MQ=255)
gTTACTTCCAAATAAATCACATATTTATC‑‑GGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATaaaa < 2:1589375/138‑1 (MQ=255)
tACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATaaaa < 2:1233664/138‑1 (MQ=255)
tACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATaaaa < 1:924934/138‑1 (MQ=255)
cTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACa < 1:889157/138‑1 (MQ=255)
taaatCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATgag < 2:1756616/138‑1 (MQ=255)
cacaTATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATg > 2:686170/1‑138 (MQ=255)
atTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCgg > 1:895355/1‑138 (MQ=255)
tttATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGa < 2:895355/138‑1 (MQ=255)
ggTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGc < 2:1656557/138‑1 (MQ=255)
gTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCa > 2:639099/1‑138 (MQ=255)
gTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAACAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCa > 2:134802/1‑138 (MQ=255)
tGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAg > 1:1095702/1‑138 (MQ=255)
tGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAg > 2:1256644/1‑138 (MQ=255)
gATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAgc > 1:1108554/1‑138 (MQ=255)
atatAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAgcg > 1:481903/1‑138 (MQ=255)
tataAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAgcgc > 1:1727994/1‑138 (MQ=255)
tataAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAgcgc > 2:856635/1‑138 (MQ=255)
ataAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGcgcg > 1:957486/1‑138 (MQ=255)
tttCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCg > 2:1682892/1‑138 (MQ=255)
ttCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGa < 2:1095702/138‑1 (MQ=255)
tCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGAc > 2:1463692/1‑138 (MQ=255)
tCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGAc > 1:935672/1‑138 (MQ=255)
cTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACAt > 1:1790203/1‑138 (MQ=255)
cTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACAt < 2:1108554/138‑1 (MQ=255)
cTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACAt < 2:1727994/138‑1 (MQ=255)
cTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACAt > 2:10584/1‑138 (MQ=255)
aaTTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAGCCGGCAGCGCGTCAGGGCGACATGa < 2:1352469/138‑1 (MQ=255)
aaTTATTTCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGa < 2:935672/138‑1 (MQ=255)
tttCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAg < 2:160906/138‑1 (MQ=255)
ttCACTCTGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGt < 1:856635/138‑1 (MQ=255)
ctGATGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCg < 1:10584/138‑1 (MQ=255)
aTGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTa > 2:490673/1‑138 (MQ=255)
aTGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTa < 2:1211023/138‑1 (MQ=255)
tGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg < 1:1256644/138‑1 (MQ=255)
tGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg < 1:1682892/138‑1 (MQ=255)
tGGATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTCCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCTGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg < 2:365897/138‑1 (MQ=255)
ggATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGc < 2:481903/138‑1 (MQ=255)
ggATATCTCACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATAGCGGTAGc > 1:1698736/1‑138 (MQ=255)
tctcACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGt > 2:328644/1‑138 (MQ=255)
ctcACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGtt > 2:473445/1‑138 (MQ=255)
cACTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCa > 2:1285287/1‑138 (MQ=255)
cTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg < 1:919903/127‑1 (MQ=255)
cTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg > 2:919903/1‑127 (MQ=255)
cTTCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAgg > 1:13415/1‑138 (MQ=255)
ttCAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAggg < 1:851157/138‑1 (MQ=255)
cAGGCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGtt > 1:1450998/1‑138 (MQ=255)
ggCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTTCGGGGTCa > 1:165731/1‑138 (MQ=255)
ggCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTc < 2:1642402/137‑1 (MQ=255)
ggCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTc > 1:1642402/1‑137 (MQ=255)
ggCTCTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCa < 2:13415/138‑1 (MQ=255)
|
CAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAAATAAATCACATATTTATCATGGTGATATAAATATTTTCCTAATTATTTCACTCTGATGGATATCTCACTTCAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGAAATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCA > NC_000913/3761984‑3762251
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
