Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,585,748 |
G→A |
F338F (TTC→TTT) |
hsdR ← |
type I restriction enzyme EcoKI endonuclease component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,585,748 | 0 | G | A | 100.0%
| 301.6
/ NA
| 85 | F338F (TTC→TTT) | hsdR | type I restriction enzyme EcoKI endonuclease component |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (48/37); total (48/37) |
CGCCCGTTGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGGAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCGCAAAG > NC_000913/4585614‑4585877
|
cgcCCGTTGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAg < 2:228823/138‑1 (MQ=255)
ttGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTa > 1:1102408/1‑138 (MQ=255)
ttGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTa > 2:1464885/1‑138 (MQ=255)
ttGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTa > 1:265627/1‑138 (MQ=255)
ttGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTa > 2:1658726/1‑138 (MQ=255)
ttGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTa > 2:1687834/1‑138 (MQ=255)
tGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTAt < 2:1474550/138‑1 (MQ=255)
ggTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATc > 2:974047/1‑138 (MQ=255)
ggTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATc < 2:713567/138‑1 (MQ=255)
cGAGTAGCAGAAGGGGATCTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGaa < 2:1135787/138‑1 (MQ=255)
aGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACAtt < 1:875577/138‑1 (MQ=255)
aGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACAtt < 2:265627/138‑1 (MQ=255)
aGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTAc > 1:329709/1‑138 (MQ=255)
aGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGt < 1:1687834/138‑1 (MQ=255)
gactttAAACCGTTGTTTGCCGCTGCTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGCTTCACGCAGAAAGCCATTATCGAAACATTTACTGTAGCg > 2:1264512/4‑138 (MQ=255)
gATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCg < 1:974047/138‑1 (MQ=255)
gATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCg < 2:876507/138‑1 (MQ=255)
aaCCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTTAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGAc > 1:243270/1‑138 (MQ=255)
cGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCa < 2:989431/138‑1 (MQ=255)
cGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCa > 1:646281/1‑138 (MQ=255)
cGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCa > 1:463000/1‑138 (MQ=255)
gttTGTCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGa > 1:988561/1‑138 (MQ=255)
gttTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGa > 2:714078/1‑138 (MQ=255)
gttTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGa > 2:39110/1‑138 (MQ=255)
cTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCg < 2:988561/138‑1 (MQ=255)
ggTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCggg < 2:647289/138‑1 (MQ=255)
ggTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCggg < 2:329709/138‑1 (MQ=255)
tgtCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGaa > 2:1607141/1‑138 (MQ=255)
cTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTc > 1:218682/1‑138 (MQ=255)
tGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATATGACTCATTGAGCCTGGCGGGAACGTCg > 2:350357/1‑138 (MQ=255)
gCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTTAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGa < 2:243270/138‑1 (MQ=255)
gCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGa > 2:1065176/1‑138 (MQ=255)
gCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGa < 2:204665/138‑1 (MQ=255)
ccAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGat < 1:1093120/138‑1 (MQ=255)
aGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGatat > 1:1237138/1‑138 (MQ=255)
gCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATAtt < 2:646281/138‑1 (MQ=255)
ttCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACg < 1:980482/138‑1 (MQ=255)
ttCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACg < 1:664894/138‑1 (MQ=255)
cATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGtt < 1:1417639/138‑1 (MQ=255)
aTACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGttt > 1:1648239/1‑138 (MQ=255)
ggCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCctct > 2:611647/1‑138 (MQ=255)
ggCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCctct > 1:36146/1‑138 (MQ=255)
ggCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCctct > 2:1377477/1‑138 (MQ=255)
gCACTGCTTCATGCACTTCATCTGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTa > 2:1085344/1‑138 (MQ=255)
gCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACg < 1:1472556/127‑1 (MQ=255)
gCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACg > 2:1472556/1‑127 (MQ=255)
gCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTa > 1:1462175/1‑138 (MQ=255)
cACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTac < 2:508174/138‑1 (MQ=255)
aCTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTacc > 1:373933/1‑138 (MQ=255)
aCTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTacc > 2:553611/1‑138 (MQ=255)
aCTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTacc < 2:218682/138‑1 (MQ=255)
ttCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgc < 2:373933/138‑1 (MQ=255)
tCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgcg < 1:714078/138‑1 (MQ=255)
tCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgcg > 1:1704025/1‑138 (MQ=255)
tCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgcg > 1:1763661/1‑138 (MQ=255)
tCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgcg > 1:366490/1‑138 (MQ=255)
aTGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGAt > 1:777405/1‑138 (MQ=255)
aTGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGAt > 1:1357657/1‑138 (MQ=255)
gCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATgg > 2:1230746/1‑138 (MQ=255)
cATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgc > 1:710214/1‑127 (MQ=255)
cATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACcgc < 2:710214/127‑1 (MQ=255)
cATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGa > 2:1247531/1‑138 (MQ=255)
tCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAgg > 1:1194934/1‑138 (MQ=255)
ggTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCg < 2:777405/138‑1 (MQ=255)
ggTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCg < 1:1658726/138‑1 (MQ=255)
gAGTAGTGCTCAAGCAAGGTTTCCCGCAGAAAGTCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACa > 1:56756/1‑138 (MQ=255)
agtagtGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACaa < 2:1763661/138‑1 (MQ=255)
gtagtGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACa < 2:1728807/136‑1 (MQ=255)
gtagtGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACa > 1:1728807/1‑136 (MQ=255)
gtGCTCAAGCAAGGTTTCCCGCAGAAAGTCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAg < 2:56756/138‑1 (MQ=255)
gtGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAg > 1:670029/1‑138 (MQ=255)
tGCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGc > 1:1463959/1‑138 (MQ=255)
gCTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGca > 2:783676/1‑138 (MQ=255)
cTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGa > 2:1597139/1‑122 (MQ=255)
cTCAAGCAAGGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGa < 1:1597139/122‑1 (MQ=255)
caagcaagGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACAt > 2:492068/1‑138 (MQ=255)
caagcaagGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACAt > 1:1706335/1‑138 (MQ=255)
aagGTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATcc > 1:1634945/1‑138 (MQ=255)
gTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGAc < 1:1076494/119‑1 (MQ=255)
gTTTCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGAc > 2:1076494/1‑119 (MQ=255)
tttCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCGCaa < 2:463000/138‑1 (MQ=255)
ttCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCGCaaa < 2:670029/138‑1 (MQ=255)
ttCCCGCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCGCaaa < 2:1237138/138‑1 (MQ=255)
tCCCGCAGGAAGCCATTCTCGAACCATTTTCTGTAGCGATACGCCTCATTGAGCATGGCGGGAGCGTCGATATTGTTACGTCTCGCCCCTACCACCGCGTTGGGTTTGAGGCCGACAAACAGCACATAATCAGccgag < 2:1757905/138‑5 (MQ=255)
gCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCg > 1:687126/1‑129 (MQ=255)
gCAGAAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCg < 2:687126/129‑1 (MQ=255)
|
CGCCCGTTGGTCGAGTAGCAGAAGGGGATTTTAAACCGTTGTTTGCCGCTGGTGTCCTGCCAGCTGGTTTCATACTCTGGCACTGCTTCATGCACTTCATCCGGTGAGTAGTGCTCAAGCAAGGTTTCCCGCAGGAAGCCATTATCGAAACATTTACTGTAGCGATACGACTCATTGAGCCTGGCGGGAACGTCGATATTGTTACGTTTCGCCTCTACCACCGCGATGGGTTTGAGGCCGACAAACAGCACATAATCCGCAAAG > NC_000913/4585614‑4585877
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
