Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	191	83.5	2830284	99.3%	2810472	139.1

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,183,318	A→G	F112L (TTT→CTT)	yegX ←	putative hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,183,318	0	A	G	100.0%	238.2 / NA	66	F112L (TTT→CTT)	yegX	putative hydrolase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (40/26); total (40/26)

GAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAAATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGAA  >  NC_000913/2183184‑2183452

gAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAgg                                                                                                                                   <  2:400847/140‑1 (MQ=255)

  aaTCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAgggg                                                                                                                                 <  1:1073399/140‑1 (MQ=255)

      gCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTcca                                                                                                                             >  2:1178241/1‑140 (MQ=255)

           gtgAGAAATCCACCGCTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGGCCACCAGc                                                                                                                        >  1:1102993/1‑140 (MQ=255)

                  aTCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGc                                                                                                                 >  2:1173983/1‑140 (MQ=255)

                      aCCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTc                                                                                                             >  1:508239/1‑140 (MQ=255)

                       ccGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCTGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTcc                                                                                                            <  2:79926/140‑1 (MQ=255)

                          tttGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTc                                                                                                         >  2:429936/1‑140 (MQ=255)

                            tGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGc                                                                                                       >  2:946570/1‑140 (MQ=255)

                            tGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGc                                                                                                       >  2:1320220/1‑140 (MQ=255)

                            tGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGc                                                                                                       >  2:1097862/1‑140 (MQ=255)

                             gCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGcc                                                                                                      <  1:1094274/140‑1 (MQ=255)

                             gCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGcc                                                                                                      <  1:529967/140‑1 (MQ=255)

                             gCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGcc                                                                                                      <  1:1173983/140‑1 (MQ=255)

                                      atCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATaaaa                                                                                             >  1:377531/1‑140 (MQ=255)

                                         tcGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCa                                                                                          <  1:1178241/140‑1 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGTCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCaaa                                                                                        >  2:883218/1‑140 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTtaata                                                                                                >  1:1364592/1‑132 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTtaata                                                                                                <  2:1364592/132‑1 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGc                                                                                           <  2:586376/137‑1 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGc                                                                                           >  1:586376/1‑137 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCaaa                                                                                        >  2:411406/1‑140 (MQ=255)

                                           gCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCaaa                                                                                        >  2:981642/1‑140 (MQ=255)

                                            ccTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAAc                                                                                       >  2:880697/1‑140 (MQ=255)

                                            ccTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAAc                                                                                       >  1:954638/1‑140 (MQ=255)

                                             ctgaactgaaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACt                                                                                      >  1:529192/1‑140 (MQ=255)

                                              tgaactgaaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTg                                                                                     <  1:429936/140‑1 (MQ=255)

                                                 actgaaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTaa                                                                                  <  2:529192/140‑1 (MQ=255)

                                                 actgaaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTaa                                                                                  <  2:508239/140‑1 (MQ=255)

                                                 actgaaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTaa                                                                                  >  1:917328/1‑140 (MQ=255)

                                                    gaaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCg                                                                               <  1:749043/140‑1 (MQ=255)

                                                     aaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTaa                                                                                  >  2:994340/1‑136 (MQ=255)

                                                     aaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTaa                                                                                  <  1:994340/136‑1 (MQ=255)

                                                     aaGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGAGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCgg                                                                              >  2:1232083/1‑140 (MQ=255)

                                                               cGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGACCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGt                                                                    >  1:1395281/1‑140 (MQ=255)

                                                                  cGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTcgc                                                                 >  1:1357832/1‑140 (MQ=255)

                                                                    gggAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCgcgc                                                               >  2:1167723/1‑140 (MQ=255)

                                                                               tGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCAc                                                    >  2:468980/1‑140 (MQ=255)

                                                                               tGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCAc                                                    >  1:82130/1‑140 (MQ=255)

                                                                                   aCGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCAcc                                                   >  1:420068/1‑137 (MQ=255)

                                                                                   aCGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCAcc                                                   <  2:420068/137‑1 (MQ=255)

                                                                                   aCGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGc                                                >  2:1168227/1‑140 (MQ=255)

                                                                                      ccccACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGc                                             >  1:780623/1‑140 (MQ=255)

                                                                                       cccACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGcc                                            >  1:190997/1‑140 (MQ=255)

                                                                                       cccACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGcc                                            >  2:903073/1‑140 (MQ=255)

                                                                                       cccACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGcc                                            >  1:1173862/1‑140 (MQ=255)

                                                                                         cACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTACGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAg                                          >  2:1242609/1‑140 (MQ=255)

                                                                                           cGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTc                                        >  2:989975/1‑140 (MQ=255)

                                                                                           cGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTc                                        >  2:541035/1‑140 (MQ=255)

                                                                                              agcagGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGAt                                     <  1:438443/140‑1 (MQ=255)

                                                                                              agcagGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGAt                                     <  2:1297746/140‑1 (MQ=255)

                                                                                                cagGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATcc                                   >  1:721730/1‑140 (MQ=255)

                                                                                                cagGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATcc                                   >  2:1047721/1‑140 (MQ=255)

                                                                                                      aTTTTCGCGGCTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCt                             >  1:1195193/1‑140 (MQ=255)

                                                                                                        tttCGCGGCTTAGTTGTCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGc                           <  1:883218/140‑1 (MQ=255)

                                                                                                                cTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGa                   <  1:940393/140‑1 (MQ=255)

                                                                                                                cTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGa                   <  2:1195193/140‑1 (MQ=255)

                                                                                                                cTTAGTTGCCAGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGa                   <  2:917328/140‑1 (MQ=255)

                                                                                                                          aGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTAtt         >  1:17455/1‑140 (MQ=255)

                                                                                                                          aGTTACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGAAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTAtt         >  2:1124105/1‑140 (MQ=255)

                                                                                                                            ttACGCGAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTcc       >  1:916241/1‑140 (MQ=255)

                                                                                                                                gcgAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGa   <  2:954638/140‑1 (MQ=255)

                                                                                                                                gcgAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGa   <  1:507610/140‑1 (MQ=255)

                                                                                                                                 cgAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGaa  <  1:411406/140‑1 (MQ=255)

                                                                                                                                 cgAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGaa  <  2:377531/140‑1 (MQ=255)

                                                                                                                                 cgAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGaa  <  2:17455/140‑1 (MQ=255)

                                                                                                                                 cgAAAGATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGaa  >  2:1063712/1‑140 (MQ=255)

                                                                                                                                 cgAAAGATACGGGTCCACCAGCTTTTCGGCTTCCGTCGCCTTAATAAAAGCAAACTGGAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGGTCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGaa  <  2:1102993/140‑1 (MQ=255)

GAAATCGCCTTGTGAGAAATCCACCGTTTGCAGAAATAATCTCGCCTGAACTGAAGCGGATACCGACGGGGAGAAATAATGATACGCCCCACGCAGCAGGCCATTTTCGCGGCTTAGTTGCCAGTTACGCGAAAAATAGGGGTCCACCAGCTTTTCGCCTTCCGTCGCCTTAATAAAAGCAAACTGTAAGCGGATACCATTGTCGCGCATTTTTGCCACCCGCTGCCAGTCGATCCGCTCCTGCCAGCGCGAAACATCTATTCCGTGAA  >  NC_000913/2183184‑2183452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A