Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F28 I1 R1 191 83.5 2830284 99.3% 2810472 139.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,053,565 (T)5→4 coding (1276/1326 nt) pepP ← proline aminopeptidase P II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,053,5610T.100.0% 281.7 / NA 65coding (1280/1326 nt)pepPproline aminopeptidase P II
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (33/32);  total (33/32)

CAATCAAATGTACCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACG  >  NC_000913/3053422‑3053695
                                                                                                                                           |                                                                                                                                      
caatcaaATGTACCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCGGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCt                                                                                                                                        <  2:543723/140‑1 (MQ=255)
 aatcaaATGTACCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCtt                                                                                                                                       <  1:1106322/140‑1 (MQ=255)
      aaTGTACCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCttttcac                                                                                                                                  <  1:460456/140‑4 (MQ=255)
        tGTACCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTcacca                                                                                                                               >  2:1078413/1‑140 (MQ=255)
           aCCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCt                                                                                                                                        <  1:411747/129‑1 (MQ=255)
           aCCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCt                                                                                                                                        >  2:411747/1‑129 (MQ=255)
                 aGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCgg                                                                                                                      >  1:1043361/1‑140 (MQ=255)
                 aGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCgg                                                                                                                      <  1:757450/140‑1 (MQ=255)
                    gcCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGGAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTgg                                                                                                                   >  2:110518/1‑139 (MQ=255)
                    gcCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGa                                                                                                                   >  2:731152/1‑140 (MQ=255)
                        cGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGtt                                                                                                               >  1:1304363/1‑140 (MQ=255)
                          tGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGTTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGtttt                                                                                                             >  2:1323/1‑140 (MQ=255)
                          tGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGtttt                                                                                                             >  2:899345/1‑140 (MQ=255)
                              ttAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGtt                                                                                                         <  2:12651/140‑1 (MQ=255)
                              ttAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGtt                                                                                                         <  2:865814/140‑1 (MQ=255)
                                  ccGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCg                                                                                                     >  1:293349/1‑140 (MQ=255)
                                   cGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCgg                                                                                                    >  2:668257/1‑140 (MQ=255)
                                    gggAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGt                                                                                                   >  2:467034/1‑140 (MQ=255)
                                      gAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGttt                                                                                                 >  1:1137333/1‑140 (MQ=255)
                                          tAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGt                                                                                             <  1:719295/140‑1 (MQ=255)
                                          tAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGt                                                                                             <  1:467034/140‑1 (MQ=255)
                                          tAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGt                                                                                             <  1:1184159/140‑1 (MQ=255)
                                          tAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGt                                                                                             <  2:892279/140‑1 (MQ=255)
                                           aGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTa                                                                                            >  2:963881/1‑140 (MQ=255)
                                             ccagcgccagcgTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAAt                                                                                          <  1:939863/140‑1 (MQ=255)
                                                    cagctTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATg                                                                                   <  1:1358891/140‑1 (MQ=255)
                                                      gcgTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATgtc                                                                                 <  2:1222695/140‑1 (MQ=255)
                                                      gcgTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATgtc                                                                                 <  2:1209959/140‑1 (MQ=255)
                                                           gcgcCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCtt                                                                            >  2:634727/1‑140 (MQ=255)
                                                                cgccATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATa                                                                       <  2:390365/140‑1 (MQ=255)
                                                                  ccATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTGCCGGTTTCGGTAATCACAATGTCGTCTTCAATACg                                                                     >  2:973536/1‑140 (MQ=255)
                                                                  ccATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACg                                                                     <  1:963881/140‑1 (MQ=255)
                                                                            aCCGACGATGATTACGCTCATAGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATa                                                           <  1:346306/140‑1 (MQ=255)
                                                                                             tCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTgg                                          <  2:1043361/140‑1 (MQ=255)
                                                                                               aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCa                                        >  2:39642/1‑140 (MQ=255)
                                                                                               aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCa                                        >  1:450675/1‑140 (MQ=255)
                                                                                               aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCa                                        <  1:634727/140‑1 (MQ=255)
                                                                                               aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCa                                        <  1:1273333/140‑1 (MQ=255)
                                                                                               aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCa                                        >  2:11867/1‑140 (MQ=255)
                                                                                               aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTCCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCa                                        >  1:13784/1‑140 (MQ=255)
                                                                                                 tGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACt                                      >  1:1001617/1‑140 (MQ=255)
                                                                                                     ttCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGGTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTg                                  >  2:1042280/1‑140 (MQ=255)
                                                                                                       ctcGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCa                                >  2:1187330/1‑140 (MQ=255)
                                                                                                       ctcGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCa                                >  2:1092079/1‑140 (MQ=255)
                                                                                                       ctcGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCa                                >  2:210889/1‑140 (MQ=255)
                                                                                                         cGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATc                              <  1:210889/140‑1 (MQ=255)
                                                                                                         cGCAGCAACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATc                              >  1:305769/1‑140 (MQ=255)
                                                                                                           cagcaACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCg                            >  1:1257296/1‑140 (MQ=255)
                                                                                                           cagcaACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCg                            >  1:1073009/1‑140 (MQ=255)
                                                                                                           cagcaACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCg                            <  1:731152/140‑1 (MQ=255)
                                                                                                           cagcaACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATCGTTCTGGCACTTCTGCATCCg                            <  2:1001617/140‑1 (MQ=255)
                                                                                                             gcaACCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGgc                          >  2:1220832/1‑140 (MQ=255)
                                                                                                                aCCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCa                       <  1:1078413/140‑1 (MQ=255)
                                                                                                                aCCATCAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCa                       >  2:867152/1‑140 (MQ=255)
                                                                                                                     cAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAAtata                  <  2:1304363/140‑1 (MQ=255)
                                                                                                                     cAACGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAAtata                  <  2:450675/140‑1 (MQ=255)
                                                                                                                      aaCGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATAc                 >  1:660641/1‑140 (MQ=255)
                                                                                                                      aaCGCTTCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATAc                 >  1:187679/1‑140 (MQ=255)
                                                                                                                           ttCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGccc            >  2:1379267/1‑140 (MQ=255)
                                                                                                                           ttCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGccc            >  1:1214499/1‑140 (MQ=255)
                                                                                                                           ttCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGccc            <  2:1214499/140‑1 (MQ=255)
                                                                                                                           ttCGATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGccc            >  2:511568/1‑140 (MQ=255)
                                                                                                                              gATTTCTTCCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTgg         <  2:293349/140‑1 (MQ=255)
                                                                                                                                  tcttcCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGctct     <  1:1187330/140‑1 (MQ=255)
                                                                                                                                  tcttcCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGctct     <  1:39642/140‑1 (MQ=255)
                                                                                                                                  tcttcCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGctct     <  1:867152/140‑1 (MQ=255)
                                                                                                                                  tcttcCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGACACTTCTGCATCCGGCGCAATATACAGCCCTGGctct     <  1:624812/140‑1 (MQ=255)
                                                                                                                                  tctccCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGctct     <  2:13784/140‑1 (MQ=255)
                                                                                                                                   cttcCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGctctg    <  2:1293146/140‑2 (MQ=255)
                                                                                                                                     tcCGGC‑TTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACg  <  1:668257/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                      
CAATCAAATGTACCGGCAGCGCCCCGTGACTTAACCGGGAAATAGCCAGCGCCAGCGTCGCGCCCGCCATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACG  >  NC_000913/3053422‑3053695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A