Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F28 I1 R1
|
191 |
83.5 |
2830284 |
99.3% |
2810472 |
139.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,277,388 |
T→C |
F18L (TTT→CTT) |
yhaV → |
ribosome‑dependent mRNA interferase toxin YhaV |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,277,388 | 0 | T | C | 100.0%
| 378.3
/ NA
| 105 | F18L (TTT→CTT) | yhaV | ribosome‑dependent mRNA interferase toxin YhaV |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (50/55); total (50/55) |
Only 100 of 108 total aligned reads displayed.
TCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAA > NC_000913/3277256‑3277524
|
tCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGa > 1:385837/1‑140 (MQ=255)
caacattcaacaAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAACGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTa < 1:134504/140‑1 (MQ=255)
aacattcaacaAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTac < 1:823118/140‑1 (MQ=255)
cattcaacaAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTacga < 2:634188/140‑1 (MQ=255)
cattcaacaAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTacga < 2:1041832/140‑1 (MQ=255)
tcaacaAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGc < 1:254504/140‑1 (MQ=255)
aacaaGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCtt > 1:950674/1‑140 (MQ=255)
aacaaGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCtt > 2:256001/1‑140 (MQ=255)
aaagaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCCGTCTTCAGGAAACCTACGACGCTTTAGTTGc > 1:112593/1‑140 (MQ=255)
aagaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGcc < 1:1195456/140‑1 (MQ=255)
aagaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGcc > 1:746515/1‑140 (MQ=255)
gaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGa > 2:943779/1‑140 (MQ=255)
aCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGt < 1:181045/140‑1 (MQ=255)
aCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGt < 1:57492/140‑1 (MQ=255)
aCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGt > 2:1400197/1‑140 (MQ=255)
aCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCCGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGt < 2:112593/140‑1 (MQ=255)
ttGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCg < 2:847827/140‑1 (MQ=255)
ttGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCg < 2:274842/140‑1 (MQ=255)
tGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCga < 1:679531/140‑1 (MQ=255)
tGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCga > 1:1267222/1‑140 (MQ=255)
tGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCga > 2:1055935/1‑140 (MQ=255)
gTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCgag < 1:943779/140‑1 (MQ=255)
gCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAGGTCGAGACa < 2:155531/140‑1 (MQ=255)
gCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACa < 2:783404/140‑1 (MQ=255)
cTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACAt > 2:731740/1‑140 (MQ=255)
ggCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTa < 2:529679/140‑1 (MQ=255)
gCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTaa < 2:1361728/140‑1 (MQ=255)
aCGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGaa < 2:385837/140‑1 (MQ=255)
cAACATTGATGATGAGATTGGCGACTACGAATAATGGGTTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGa > 2:1247723/1‑140 (MQ=255)
cAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGa > 2:1156963/1‑140 (MQ=255)
cAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGa > 2:581655/1‑140 (MQ=255)
cAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGa > 1:656033/1‑140 (MQ=255)
cAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGa > 2:538810/1‑140 (MQ=255)
aaCATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGAt > 2:329642/1‑140 (MQ=255)
aaCATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGAt < 2:950674/140‑1 (MQ=255)
aaCATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGAt > 1:1242163/1‑140 (MQ=255)
cATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATcc < 2:619364/140‑1 (MQ=255)
cATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCACCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATcc < 2:1242163/140‑1 (MQ=255)
ttGATGGTGAGATTGGCGACGACGAATAATGGTTTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTGTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGCCATTAAAGGGAAAAGATCCTg > 2:1265411/1‑140 (MQ=255)
ttGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTg > 1:474783/1‑140 (MQ=255)
atgatgaGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGaaa > 1:498273/1‑140 (MQ=255)
gagaTTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTAt < 1:639928/140‑1 (MQ=255)
gagaTTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTAt < 1:1175903/140‑1 (MQ=255)
tGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCagag > 2:1061682/1‑140 (MQ=255)
ataatGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCcac < 1:767293/140‑1 (MQ=255)
tGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAACCCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAg < 1:440231/140‑1 (MQ=255)
gATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGtt > 2:827750/1‑140 (MQ=255)
tttCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTAtt > 2:157940/1‑140 (MQ=255)
tttCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCATGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTAtt > 1:439574/1‑140 (MQ=255)
tCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAgc < 2:517492/123‑1 (MQ=255)
tCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAgc > 1:517492/1‑123 (MQ=255)
tCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTgg > 2:1039696/1‑140 (MQ=255)
tCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTgg > 1:552497/1‑140 (MQ=255)
tCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTgg < 2:746515/140‑1 (MQ=255)
caAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGt < 1:827750/140‑1 (MQ=255)
caAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGt < 2:1039560/140‑1 (MQ=255)
caAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGAAATTAAAGGGAAAAGATCCTGAAAATTACCAGAGAAAAGCCGCCACAAAGTTATTGGCGGt < 1:1400197/140‑1 (MQ=255)
caAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTAAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGt < 2:1316946/140‑1 (MQ=255)
aaaaGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGt < 1:791412/139‑1 (MQ=255)
aaaGGGTTAATGGTTGGGCGCTATATGCTCACCCCTGTCTTCAGGAAACCTACGACGCTTAAGTGCCCGAAGTCGAAACATTAAAGGGAAAAGTTCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTa < 2:661806/140‑1 (MQ=255)
gggTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGTTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTc < 2:928281/140‑1 (MQ=255)
gggTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTc < 2:417467/140‑1 (MQ=255)
gggTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTc < 2:1214268/140‑1 (MQ=255)
gggTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTc < 1:1259783/140‑1 (MQ=255)
gTTAATGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCa > 2:1117171/1‑140 (MQ=255)
aaTGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATaa < 1:157940/140‑1 (MQ=255)
aaTGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATaa < 1:729462/140‑1 (MQ=255)
tGGTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATaaaa > 2:1110122/1‑139 (MQ=255)
ggTTGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGt < 1:1286271/140‑1 (MQ=255)
tGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATaaaaagat > 2:630397/1‑135 (MQ=255)
tGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGAt > 1:468673/1‑140 (MQ=255)
tGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGAt > 1:1306468/1‑140 (MQ=255)
tGGGCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGAt > 1:1297537/1‑140 (MQ=255)
gggCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCgg > 2:712944/1‑123 (MQ=255)
gggCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCgg < 1:712944/123‑1 (MQ=255)
ggCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTg > 1:476750/1‑140 (MQ=255)
ggCGCTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTg < 1:1210441/140‑1 (MQ=255)
cgcTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgag < 1:1039696/140‑1 (MQ=255)
cgcTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgag < 2:468673/140‑1 (MQ=255)
cgcTATATGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgag < 1:1156963/140‑1 (MQ=255)
atatGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGc > 2:957025/1‑140 (MQ=255)
tatGCTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCa > 1:770930/1‑140 (MQ=255)
cTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATc < 2:207173/140‑1 (MQ=255)
cTCATCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATc < 2:498273/140‑1 (MQ=255)
aTCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACg < 1:1110122/140‑1 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgag < 1:961580/127‑1 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgag < 2:960971/127‑1 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgag > 1:960971/1‑127 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCatat > 1:1296077/1‑135 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCatat < 2:1296077/135‑1 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACgg > 1:1136459/1‑140 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACgg > 2:56275/1‑140 (MQ=255)
tCCCTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAAGGATTGAGGAGGATATCACgg > 2:644539/1‑140 (MQ=255)
cccTGTCTTCAGGAACCCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgaggag < 1:63466/129‑1 (MQ=255)
cccTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTgaggag > 2:63466/1‑129 (MQ=255)
cccTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGt < 1:329642/140‑1 (MQ=255)
ccTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGTCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCAc < 1:833029/136‑1 (MQ=255)
ccTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGTCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCAc > 2:833029/1‑136 (MQ=255)
ccTGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTc > 1:810097/1‑140 (MQ=255)
tGTCTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAATGATTGAGGAGCATATCACGGTCaa > 1:1006787/1‑140 (MQ=255)
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TCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAA > NC_000913/3277256‑3277524
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
