Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F28 I1 R1 161 75.5 2581324 99.3% 2563254 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 69,699 A→G V117A (GTA→GCA)  araB ← ribulokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091369,6990AG100.0% 260.8 / NA 72V117A (GTA→GCA) araBribulokinase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (45/27);  total (45/27)

CAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAG  >  NC_000913/69566‑69835
                                                                                                                                     |                                                                                                                                        
cAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCTCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACa                                                                                                                                    <  2:51939/140‑1 (MQ=255)
cAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACa                                                                                                                                    >  1:608489/1‑140 (MQ=255)
     tttttGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATcgcg                                                                                                                               >  2:17018/1‑140 (MQ=255)
              aGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGttt                                                                                                                      <  2:847341/140‑1 (MQ=255)
               gAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGtttt                                                                                                                     >  2:159186/1‑140 (MQ=255)
                    aTTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCa                                                                                                                <  2:470619/140‑1 (MQ=255)
                              ataaataCCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgc                                                                                                      >  2:774125/1‑140 (MQ=255)
                              ataaataCCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgc                                                                                                      <  1:904087/140‑1 (MQ=255)
                               taaataCCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgcg                                                                                                     <  1:159186/140‑1 (MQ=255)
                                 aataCCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCa                                                                                                   >  2:832404/1‑140 (MQ=255)
                                    accaccAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAgcg                                                                                                >  2:887972/1‑140 (MQ=255)
                                      caccaATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGcc                                                                                              >  1:1019947/1‑140 (MQ=255)
                                        ccaATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAg                                                                                            >  1:1145971/1‑140 (MQ=255)
                                        ccaATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAg                                                                                            <  1:958982/140‑1 (MQ=255)
                                          aaTGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCa                                                                                          <  1:774125/140‑1 (MQ=255)
                                           aTGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCAc                                                                                         >  1:1245454/1‑140 (MQ=255)
                                           aTGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCAc                                                                                         >  1:1229147/1‑140 (MQ=255)
                                           aTGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCAc                                                                                         >  2:860673/1‑140 (MQ=255)
                                               aGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGttt                                                                                     >  1:763500/1‑140 (MQ=255)
                                                  gggAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgcgc                                                                                                    <  2:1002306/122‑1 (MQ=255)
                                                  gggAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgcgc                                                                                                    >  1:1002306/1‑122 (MQ=255)
                                                   ggAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGt                                                                                 <  1:284973/140‑1 (MQ=255)
                                                      gtagtCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGcc                                                                                              >  2:459783/1‑124 (MQ=255)
                                                      gtagtCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGcc                                                                                              <  1:459783/124‑1 (MQ=255)
                                                                 tGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGt                                                                   >  2:637614/1‑140 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGc                                                                             >  1:395082/1‑128 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGc                                                                             <  2:395082/128‑1 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGc                                                                 >  2:925145/1‑140 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGc                                                                 >  1:332952/1‑140 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGc                                                                 >  2:333604/1‑140 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGc                                                                 >  2:1069906/1‑140 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGc                                                                 >  2:707830/1‑140 (MQ=255)
                                                                   cccGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGc                                                                 >  1:1177047/1‑140 (MQ=255)
                                                                        cgcgTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCg                                                            >  1:942073/1‑140 (MQ=255)
                                                                         gcgTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGt                                                           <  2:1177047/140‑1 (MQ=255)
                                                                             ggCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAg                                                       >  2:461053/1‑140 (MQ=255)
                                                                             ggCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAg                                                       >  1:550921/1‑140 (MQ=255)
                                                                             ggCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAg                                                       <  2:332952/140‑1 (MQ=255)
                                                                              gCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGc                                                      <  2:1145971/140‑1 (MQ=255)
                                                                              gCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGc                                                      <  1:707830/140‑1 (MQ=255)
                                                                              gCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGc                                                      <  2:1229147/140‑1 (MQ=255)
                                                                                   aaCGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTa                                                 <  1:860673/140‑1 (MQ=255)
                                                                                    aCGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTAc                                                >  2:874580/1‑140 (MQ=255)
                                                                                        gTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTc                                            <  1:637614/140‑1 (MQ=255)
                                                                                        gTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTc                                            <  2:1245454/140‑1 (MQ=255)
                                                                                              tctTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGcc                                      >  2:61771/1‑140 (MQ=255)
                                                                                                 tCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAAt                                   >  2:411554/1‑140 (MQ=255)
                                                                                                  ccGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAACCTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATc                                  <  2:550921/140‑1 (MQ=255)
                                                                                                  ccGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATc                                  <  1:1069906/140‑1 (MQ=255)
                                                                                                     cttcttCAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCg                               >  2:946114/1‑140 (MQ=255)
                                                                                                        cttcAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGAcc                            >  2:1233562/1‑140 (MQ=255)
                                                                                                        cttcAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGAcc                            >  1:761552/1‑140 (MQ=255)
                                                                                                        cttcAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGAcc                            >  1:1207199/1‑140 (MQ=255)
                                                                                                         ttcAACCGCAGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACca                           <  1:586252/140‑1 (MQ=255)
                                                                                                                  aGTGTGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgcgc                  >  2:588535/1‑140 (MQ=255)
                                                                                                                   gtgtGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgcgcg                 >  1:458550/1‑140 (MQ=255)
                                                                                                                   gtgtGGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgcgcg                 >  2:501223/1‑140 (MQ=255)
                                                                                                                    tgtgGTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgcgcgc                >  2:1265211/1‑140 (MQ=255)
                                                                                                                        gTCTTTCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGtt            <  1:17018/140‑1 (MQ=255)
                                                                                                                           tttCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGa         <  1:333604/140‑1 (MQ=255)
                                                                                                                           tttCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGa         >  1:78134/1‑140 (MQ=255)
                                                                                                                           tttCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGa         <  1:925145/140‑1 (MQ=255)
                                                                                                                             tCCACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACg       >  1:167870/1‑140 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTGCTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGc      >  2:1196656/1‑140 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgc                    >  1:935030/1‑126 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgc                    <  2:935030/126‑1 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGc      >  1:862742/1‑140 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGc      >  1:535350/1‑140 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGc      >  1:1163240/1‑140 (MQ=255)
                                                                                                                              ccACAATGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGc      >  1:94651/1‑140 (MQ=255)
                                                                                                                                  aaTGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAg  >  2:82679/1‑140 (MQ=255)
                                                                                                                                  aaTGCGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAg  <  2:995205/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                        
CAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAG  >  NC_000913/69566‑69835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A