Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
161 |
75.5 |
2581324 |
99.3% |
2563254 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,774,920 |
T→C |
F79L (TTT→CTT) |
aroD → |
3‑dehydroquinate dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,774,920 | 0 | T | C | 100.0%
| 270.2
/ NA
| 75 | F79L (TTT→CTT) | aroD | 3‑dehydroquinate dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (34/41); total (34/41) |
AAGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGTTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTGATGATC > NC_000913/1774783‑1775052
|
aaGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGctt > 2:1169824/1‑140 (MQ=255)
gCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCg < 1:74398/140‑1 (MQ=255)
gCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCg < 1:691598/140‑1 (MQ=255)
gCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCg > 1:566479/1‑140 (MQ=255)
tATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAg < 2:159094/140‑1 (MQ=255)
tCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTg > 2:533206/1‑140 (MQ=255)
tGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCa > 2:150342/1‑140 (MQ=255)
aaGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCaaa > 1:1036557/1‑140 (MQ=255)
aaGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCaaa > 2:1150637/1‑140 (MQ=255)
aCTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCa < 2:93818/126‑1 (MQ=255)
aCTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCa > 1:93818/1‑126 (MQ=255)
tatTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGc < 1:593925/140‑1 (MQ=255)
tGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAggcgg < 2:582532/130‑1 (MQ=255)
tGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAggcgg > 1:582532/1‑130 (MQ=255)
tGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCg > 1:513957/1‑140 (MQ=255)
tGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCg > 1:922196/1‑140 (MQ=255)
tGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCg > 2:999452/1‑140 (MQ=255)
tGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCAGCTGCTTACCTTCCGCAGTGCCAAAGAAGGGGGCGAGCAGGCg > 2:1128957/1‑140 (MQ=255)
aTGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGAttt > 1:1204504/1‑140 (MQ=255)
cGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCAc > 1:486067/1‑140 (MQ=255)
gtgtGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCAcc < 1:182512/140‑1 (MQ=255)
gtgtGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCAcc < 1:1026246/140‑1 (MQ=255)
tgtgGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCCAAGAAGGCGGCGAGCAGGCGATTTCCAcc > 2:974572/1‑139 (MQ=255)
tgtgGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCAcc < 1:974572/139‑1 (MQ=255)
tgtgGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCg > 2:1076644/1‑140 (MQ=255)
tgtgGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGGGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCg > 2:529261/1‑140 (MQ=255)
gACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGc < 2:922196/140‑1 (MQ=255)
tATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTatat > 1:622428/1‑140 (MQ=255)
tATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTatat > 1:813211/1‑140 (MQ=255)
tGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCAcc < 1:410969/127‑1 (MQ=255)
tGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCAcc > 2:410969/1‑127 (MQ=255)
ccGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCa < 1:533206/140‑1 (MQ=255)
cGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCa > 1:1084061/1‑122 (MQ=255)
cGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCa < 2:1084061/122‑1 (MQ=255)
aCCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTtata < 2:482450/132‑1 (MQ=255)
aCCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTtata > 1:482450/1‑132 (MQ=255)
aCCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTc > 2:299595/1‑140 (MQ=255)
ctctCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGc < 2:329484/125‑1 (MQ=255)
ctctCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGc > 1:329484/1‑125 (MQ=255)
ctctCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCaa > 1:754976/1‑140 (MQ=255)
cAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTg < 1:187468/140‑1 (MQ=255)
cAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTg < 2:1005637/140‑1 (MQ=255)
tgGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGcc > 1:616319/1‑140 (MQ=255)
gAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCAt < 1:299595/140‑1 (MQ=255)
aGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTg > 1:1046397/1‑132 (MQ=255)
aGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTg < 2:1046397/132‑1 (MQ=255)
aGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATc > 1:794903/1‑140 (MQ=255)
aGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGGTCCAAAGAAGGCGGCGGGCGGGCGTTTTCCACCTAGGCTTATATTGCACTCAATCGTGCAGCCATc > 2:107870/1‑140 (MQ=255)
tGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACa > 2:650545/1‑140 (MQ=255)
tGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACa > 1:1046673/1‑140 (MQ=255)
gTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAACAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAg < 2:1204504/140‑1 (MQ=255)
gTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAg < 2:486067/140‑1 (MQ=255)
aTGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCgg < 1:1169824/140‑1 (MQ=255)
tGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGc < 2:813211/140‑1 (MQ=255)
tGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGc < 2:794903/140‑1 (MQ=255)
ggcggcAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGcc < 1:1034131/140‑1 (MQ=255)
ggcggcAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGcc < 1:650545/140‑1 (MQ=255)
cggcAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTg > 2:2231/1‑140 (MQ=255)
cggcAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTg < 2:513957/140‑1 (MQ=255)
agcaAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTg > 1:1173918/1‑140 (MQ=255)
agcaAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTg > 1:1254626/1‑140 (MQ=255)
agcaAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTg > 2:650601/1‑140 (MQ=255)
agcaAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTg > 2:117125/1‑140 (MQ=255)
aaaaTTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGatat < 1:1150637/140‑1 (MQ=255)
aTTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATgat < 1:1076644/140‑1 (MQ=255)
aTTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATgat < 1:150342/140‑1 (MQ=255)
aTTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATgat < 2:754976/140‑1 (MQ=255)
aTTCTCCGTGAGACCATGCCAGAAAAACCGCAGCTGCTTACCTTCCGCAGTGCCAAAGAAGGTGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATgat < 1:1128957/140‑1 (MQ=255)
aTTCTCCGGGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATgat < 1:529261/140‑1 (MQ=255)
tcCGTGAGACCATGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATgatcgat < 1:2231/140‑1 (MQ=255)
tGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTAttt > 1:1227478/1‑140 (MQ=255)
tGCCAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTAttt > 2:487975/1‑140 (MQ=255)
ccAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTAc < 1:823158/140‑1 (MQ=255)
ccAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTAc < 1:649398/140‑1 (MQ=255)
ccAGAAAAACCGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTAc < 2:1036557/140‑1 (MQ=255)
ccGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGtgatga < 2:1173918/140‑1 (MQ=255)
ccGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGtgatga > 2:865018/1‑140 (MQ=255)
cGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTgatgat < 2:1046673/140‑1 (MQ=255)
cGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTgatgat < 1:999452/140‑1 (MQ=255)
cGCTGCTGCTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTgatgat < 1:865018/140‑1 (MQ=255)
gctgctgctTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTGATGATc < 2:55605/140‑1 (MQ=255)
|
AAGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGTTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTGATGATC > NC_000913/1774783‑1775052
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
