Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
161 |
75.5 |
2581324 |
99.3% |
2563254 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,863,508 |
T→C |
R246R (CGT→CGC) |
gapA → |
glyceraldehyde‑3‑phosphate dehydrogenase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,863,508 | 0 | T | C | 100.0%
| 308.7
/ NA
| 83 | R246R (CGT→CGC) | gapA | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (49/34); total (49/34) |
CATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGTCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCACTTCCG > NC_000913/1863382‑1863644
|
catcCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTg > 2:830107/1‑140 (MQ=255)
catcCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTg > 1:85622/1‑140 (MQ=255)
tcCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCa > 2:649244/1‑140 (MQ=255)
cGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGc < 2:870749/136‑1 (MQ=255)
cGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGc > 1:870749/1‑136 (MQ=255)
gTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACtt < 1:950931/140‑1 (MQ=255)
gTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACtt > 1:474978/1‑140 (MQ=255)
tCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTa > 2:459448/1‑140 (MQ=255)
ccTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTAc > 2:450067/1‑140 (MQ=255)
ctACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAg < 2:982788/140‑1 (MQ=255)
ctACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAg < 2:128276/140‑1 (MQ=255)
gTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATc > 2:1279883/1‑140 (MQ=255)
gTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGG‑AAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCa > 2:147095/1‑140 (MQ=255)
gctgctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCaa > 1:1285353/1‑140 (MQ=255)
gctgctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCaa > 1:783690/1‑140 (MQ=255)
gctgctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCaa > 2:651973/1‑140 (MQ=255)
ctgctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCaaa > 1:294531/1‑140 (MQ=255)
ctgctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCaaa > 2:483636/1‑140 (MQ=255)
tgctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAg < 1:450067/140‑1 (MQ=255)
gctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAg < 2:782529/129‑1 (MQ=255)
gctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAg > 1:782529/1‑129 (MQ=255)
gctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGc < 1:436989/140‑1 (MQ=255)
gctAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGc < 2:85622/140‑1 (MQ=255)
tAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTg > 2:423138/1‑140 (MQ=255)
tAAAGCTGTAGGTAAAGTACTGCCAAAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTg < 2:1285353/140‑1 (MQ=255)
aGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCGGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGCCCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAg < 2:229858/140‑1 (MQ=255)
aGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGc < 2:1061902/132‑1 (MQ=255)
aGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGc > 1:1061902/1‑132 (MQ=255)
aGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAg > 2:1065564/1‑140 (MQ=255)
tAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAgctg < 2:1184455/140‑1 (MQ=255)
cTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGa < 1:423138/140‑1 (MQ=255)
tGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGaa < 1:830107/140‑1 (MQ=255)
ccAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAgg > 1:2180/1‑140 (MQ=255)
aaTGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGaa > 2:634041/1‑140 (MQ=255)
aaTGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGaa > 2:416536/1‑140 (MQ=255)
tGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAg < 1:630730/140‑1 (MQ=255)
tGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAg < 2:2180/140‑1 (MQ=255)
atggaaaCTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAg < 1:147095/136‑1 (MQ=255)
cAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCg > 1:1077438/1‑140 (MQ=255)
aaCTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGtt < 2:916953/140‑1 (MQ=255)
aaCTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGtt < 1:1117869/140‑1 (MQ=255)
aaCTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGtt < 2:963741/140‑1 (MQ=255)
actgGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTggg > 1:1180300/1‑140 (MQ=255)
ctgGTAGGGCTTCCCGAGTTTCGACGCCGACCGCATCTGTAGTTGGGCTGGCCGTTCGCTTGGAAAAAGCCCCAACTTACGACCGGATAAAAGGAGGAGTTAACGGTGCTGCTGAAGGCGAAATGAAAGGCGTTCTgggt < 2:1280904/140‑2 (MQ=255)
tgGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCt < 1:651973/140‑1 (MQ=255)
tGGCGTTCCGCGCTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGAGTTCTGGGCTACAcc > 2:1062858/1‑140 (MQ=255)
ggCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCg > 2:209765/1‑140 (MQ=255)
cgttccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGaa > 2:137517/1‑140 (MQ=255)
gttccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAg > 1:852922/1‑140 (MQ=255)
gttccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAg < 1:209765/140‑1 (MQ=255)
ttccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGa < 1:416536/140‑1 (MQ=255)
ttccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGa < 1:137517/140‑1 (MQ=255)
ccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATg > 2:429063/1‑140 (MQ=255)
ccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATg < 1:371545/140‑1 (MQ=255)
ccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATg > 2:1254090/1‑140 (MQ=255)
ccgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATg > 1:540022/1‑140 (MQ=255)
cgcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGa > 2:836127/1‑140 (MQ=255)
gcgttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGAc < 1:1254090/140‑1 (MQ=255)
gttccgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACgt < 1:1065564/140‑1 (MQ=255)
cgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGGCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGa > 2:693588/1‑127 (MQ=255)
cgACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGa < 1:693588/127‑1 (MQ=255)
gACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTAt < 1:649244/140‑1 (MQ=255)
aCCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATc > 2:236053/1‑140 (MQ=255)
aCCCCGAACGTATCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATc > 1:714982/1‑140 (MQ=255)
aTCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCa > 1:869085/1‑140 (MQ=255)
aTCTGTAGTTGACCTGACCGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCa > 1:691194/1‑140 (MQ=255)
tgacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAg > 2:1155247/1‑140 (MQ=255)
tgacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAg > 1:669613/1‑140 (MQ=255)
gacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGt > 1:1030290/1‑140 (MQ=255)
gacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGt > 2:935775/1‑140 (MQ=255)
gacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGt > 1:128452/1‑140 (MQ=255)
gacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGt > 1:1028058/1‑140 (MQ=255)
gacctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGt > 2:450693/1‑140 (MQ=255)
cctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGttt < 2:204409/140‑1 (MQ=255)
ctgaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTg > 1:95068/1‑140 (MQ=255)
gaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCa < 2:1030290/140‑1 (MQ=255)
gaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCa > 1:1224458/1‑140 (MQ=255)
gaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCa > 1:791717/1‑140 (MQ=255)
gaccGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCa < 1:634041/140‑1 (MQ=255)
accGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAGGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGGAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCAc > 1:1184027/1‑140 (MQ=255)
accGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTg > 1:1068244/1‑137 (MQ=255)
accGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTg < 2:1068244/137‑1 (MQ=255)
accGTTCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCAc > 2:868283/1‑140 (MQ=255)
tCGCCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCACTTCCg < 2:1180300/140‑1 (MQ=255)
|
CATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGTCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCACTTCCG > NC_000913/1863382‑1863644
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
