Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F28 I1 R1	161	75.5	2581324	99.3%	2563254	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,182,807	A→G	P86P (CCA→CCG)	zupT →	heavy metal divalent cation transporter ZupT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,182,807	0	A	G	100.0%	227.9 / NA	62	P86P (CCA→CCG)	zupT	heavy metal divalent cation transporter ZupT
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (41/21); total (41/21)

TGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCACATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCACGGCG  >  NC_000913/3182683‑3182942

tGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCcgca                                                                                                                                       >  2:552536/1‑127 (MQ=255)

tGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTAAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCAt                                                                                                                                >  1:729135/1‑134 (MQ=255)

tGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTAAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCAt                                                                                                                                <  2:729135/134‑1 (MQ=255)

 gCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCcgca                                                                                                                                       >  1:224354/1‑126 (MQ=255)

  ctcatctcatTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGa                                                                                                                        >  2:1225419/1‑140 (MQ=255)

  ctcatctcatTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGa                                                                                                                        >  1:393197/1‑140 (MQ=255)

   tcatctcatTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGAt                                                                                                                       >  2:911603/1‑140 (MQ=255)

       ctcatTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTaa                                                                                                                   >  1:443313/1‑140 (MQ=255)

          atTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGc                                                                                                                <  1:911603/140‑1 (MQ=255)

                 gAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATc                                                                                                         >  1:1256357/1‑140 (MQ=255)

                    aTGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGt                                                                                                      >  1:695628/1‑140 (MQ=255)

                     tGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTg                                                                                                     <  1:591369/140‑1 (MQ=255)

                          ccTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGcc                                                                                                <  2:1256357/140‑1 (MQ=255)

                          ccTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGcc                                                                                                >  2:1164739/1‑140 (MQ=255)

                            tGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGc                                                                                                 <  2:206708/137‑1 (MQ=255)

                            tGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGc                                                                                                 >  1:206708/1‑137 (MQ=255)

                                       cagcTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCg                                                                                   >  2:383821/1‑140 (MQ=255)

                                        agcTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGa                                                                                  >  1:1170278/1‑140 (MQ=255)

                                          cTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATc                                                                                >  1:764988/1‑140 (MQ=255)

                                           tGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCa                                                                               >  2:344812/1‑140 (MQ=255)

                                              aGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAgc                                                                            >  2:1058264/1‑140 (MQ=255)

                                              aGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAgc                                                                            >  2:854412/1‑140 (MQ=255)

                                               ggAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAgcg                                                                           <  1:854412/140‑1 (MQ=255)

                                               ggAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAgcg                                                                           <  2:695628/140‑1 (MQ=255)

                                               ggAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAgcg                                                                           <  1:216886/140‑1 (MQ=255)

                                                    gTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAg                                                                      >  2:1185626/1‑140 (MQ=255)

                                                     tCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGc                                                                     >  1:1115929/1‑140 (MQ=255)

                                                       gCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCa                                                                   <  1:383821/140‑1 (MQ=255)

                                                       gCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCa                                                                   <  2:764988/140‑1 (MQ=255)

                                                        ccTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCAt                                                                  <  1:297648/140‑1 (MQ=255)

                                                        ccTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCAt                                                                  <  2:393197/140‑1 (MQ=255)

                                                          tgtgTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTc                                                                >  1:696538/1‑140 (MQ=255)

                                                           gtgtTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCa                                                                   >  2:413032/1‑136 (MQ=255)

                                                           gtgtTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCa                                                                   <  1:413032/136‑1 (MQ=255)

                                                            tgtTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTg                                                              >  2:240976/1‑140 (MQ=255)

                                                             gtTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGc                                                             <  1:1164739/140‑1 (MQ=255)

                                                                gggTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCa                                                          <  1:1225419/140‑1 (MQ=255)

                                                                    tATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCActct                                                      <  2:1170278/140‑1 (MQ=255)

                                                                      tGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCg                                                    >  1:513425/1‑140 (MQ=255)

                                                                          aTGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCAt                                                <  1:1185626/140‑1 (MQ=255)

                                                                           tGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATc                                               >  1:911947/1‑140 (MQ=255)

                                                                           tGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATc                                               >  1:791085/1‑140 (MQ=255)

                                                                           tGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATc                                               >  1:1252288/1‑140 (MQ=255)

                                                                             tttATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAg                                             >  2:71693/1‑140 (MQ=255)

                                                                             tttATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAg                                             >  1:1135117/1‑140 (MQ=255)

                                                                                     cGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATa                                     >  2:528273/1‑140 (MQ=255)

                                                                                       gTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAAc                                   >  2:1219976/1‑140 (MQ=255)

                                                                                            cTTGGCTATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGAAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCTGCATCAGTCTGCATAACTTccc                              >  1:587776/1‑140 (MQ=255)

                                                                                                  tATTTTGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAgg                        <  2:513425/140‑1 (MQ=255)

                                                                                                    ttttGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGa                      >  2:527239/1‑140 (MQ=255)

                                                                                                      ttGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGAtt                    >  2:1100655/1‑140 (MQ=255)

                                                                                                      ttGGCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGACATCAGTCTGCATAACTTCCCGGAAGGGAtt                    >  1:946756/1‑140 (MQ=255)

                                                                                                        ggCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGc                  <  2:1135117/140‑1 (MQ=255)

                                                                                                         gCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGcc                 >  2:1233133/1‑140 (MQ=255)

                                                                                                         gCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGcc                 >  1:155346/1‑140 (MQ=255)

                                                                                                         gCCTGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGcc                 >  2:1068178/1‑140 (MQ=255)

                                                                                                            tGGACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCAcc              >  2:1207379/1‑140 (MQ=255)

                                                                                                              gACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCtt            >  2:258659/1‑140 (MQ=255)

                                                                                                              gACCGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCtt            >  1:254060/1‑140 (MQ=255)

                                                                                                                ccGCATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGACATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTg          <  2:946756/140‑1 (MQ=255)

                                                                                                                   cATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCa       >  1:155884/1‑140 (MQ=255)

                                                                                                                   cATGTTGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCa       >  2:291629/1‑140 (MQ=255)

                                                                                                                       ttGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCACGGc   <  1:291629/140‑1 (MQ=255)

                                                                                                                        tGCCGCATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCACGGCg  >  2:356375/1‑140 (MQ=255)

TGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCACATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCACGGCG  >  NC_000913/3182683‑3182942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A