Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
161 |
75.5 |
2581324 |
99.3% |
2563254 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,096,292 |
A→G |
L386P (CTG→CCG) |
rhaB ← |
rhamnulokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,096,292 | 0 | A | G | 100.0%
| 313.9
/ NA
| 84 | L386P (CTG→CCG) | rhaB | rhamnulokinase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/46); total (38/46) |
CGAGCGTCGAGGCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCAGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGTCTCAGG > NC_000913/4096155‑4096425
|
cGAGCGTCGAGGCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGc > 1:1289181/1‑140 (MQ=255)
cGAGGCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCa < 2:846899/140‑1 (MQ=255)
aGGCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAac > 1:675170/1‑140 (MQ=255)
aGGCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAac > 1:911656/1‑140 (MQ=255)
ggCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAaca < 2:244388/140‑1 (MQ=255)
ggCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAaca < 2:538726/140‑1 (MQ=255)
ttCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACAt < 1:773854/140‑1 (MQ=255)
ttCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACAt < 1:332074/140‑1 (MQ=255)
ttCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACAt < 1:437177/140‑1 (MQ=255)
ttCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACAt < 1:946465/140‑1 (MQ=255)
tCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATc > 2:811124/1‑140 (MQ=255)
aCAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGc < 2:924571/140‑1 (MQ=255)
aGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCAt < 1:214102/140‑1 (MQ=255)
ccGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAATTCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATAcag < 1:485971/140‑1 (MQ=255)
ccGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATAcag < 1:1087652/140‑1 (MQ=255)
aCCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAg > 1:795139/1‑140 (MQ=255)
aCCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAg < 2:1289181/140‑1 (MQ=255)
cGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGaaa > 1:1016462/1‑140 (MQ=255)
cGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGaaa > 1:498902/1‑140 (MQ=255)
cAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAAt > 1:355470/1‑140 (MQ=255)
cAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAAt > 1:411179/1‑140 (MQ=255)
cAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAAt > 2:43249/1‑140 (MQ=255)
cAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAAt > 2:757357/1‑140 (MQ=255)
ggCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGc < 2:1217134/140‑1 (MQ=255)
gCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCa > 1:1060153/1‑140 (MQ=255)
gCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCa > 2:636318/1‑140 (MQ=255)
cATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAg < 2:31350/140‑1 (MQ=255)
cGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAgcgc > 2:999525/1‑140 (MQ=255)
ggCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAgcgcg > 2:496509/1‑140 (MQ=255)
ggCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAgcgcg > 2:911392/1‑140 (MQ=255)
gcgcATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAgcgcgc < 1:1122988/140‑1 (MQ=255)
aTAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGt > 2:445246/1‑140 (MQ=255)
tAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGtt < 2:1265691/140‑1 (MQ=255)
gCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCa > 1:1284053/1‑140 (MQ=255)
gCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCa < 1:445246/140‑1 (MQ=255)
tGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCa < 1:535313/140‑1 (MQ=255)
tGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCa < 1:527788/140‑1 (MQ=255)
gAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCAc < 1:43249/140‑1 (MQ=255)
gcagcGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACtt < 1:189751/140‑1 (MQ=255)
gtgtTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCgg > 1:1021198/1‑140 (MQ=255)
tgtTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCggg > 2:620750/1‑140 (MQ=255)
gCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGtt > 2:810156/1‑140 (MQ=255)
gCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTgcg > 1:313994/1‑140 (MQ=255)
gCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTgcg > 1:613009/1‑140 (MQ=255)
ccTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTgcgc > 1:145802/1‑140 (MQ=255)
cTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGcc > 1:552744/1‑140 (MQ=255)
tCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCg > 1:1233302/1‑140 (MQ=255)
tCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCg > 2:755108/1‑140 (MQ=255)
cgccgACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGtt > 2:1055221/1‑140 (MQ=255)
ccgACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTc > 1:800444/1‑140 (MQ=255)
atatGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGaca < 2:911656/140‑1 (MQ=255)
atatGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCACCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGaca < 2:675170/140‑1 (MQ=255)
tatGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGacac < 1:379402/140‑1 (MQ=255)
atGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACg < 1:496509/140‑1 (MQ=255)
gCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCa > 2:944082/1‑140 (MQ=255)
ttGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGtt < 1:764272/124‑1 (MQ=255)
ttGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGtt > 2:764272/1‑124 (MQ=255)
ttGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCt > 1:235662/1‑140 (MQ=255)
ttGCGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCt > 1:352990/1‑140 (MQ=255)
cGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGaa < 2:187239/140‑1 (MQ=255)
cGAGAAATCTTCACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGaa > 1:980882/1‑140 (MQ=255)
cACCGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGcac < 2:797097/140‑1 (MQ=255)
ccGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCTGACACGCAGCCTGAATTTCGCTGCACAt < 1:213563/140‑1 (MQ=255)
ccGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACAt < 2:313994/140‑1 (MQ=255)
ccGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACAt < 2:235662/140‑1 (MQ=255)
ccGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACAt < 2:189054/140‑1 (MQ=255)
ccGCGCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACAt < 1:1055221/140‑1 (MQ=255)
cgcgCAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATc < 2:613009/140‑1 (MQ=255)
gcgcAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCg > 2:576269/1‑140 (MQ=255)
cgcAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACAt < 2:685271/137‑1 (MQ=255)
cgcAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACAt > 1:685271/1‑137 (MQ=255)
gcAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtc < 1:576269/140‑1 (MQ=255)
gcAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtc < 1:635777/140‑1 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct < 2:1016462/140‑1 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct < 1:810156/140‑1 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct < 1:755108/140‑1 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct < 1:636318/140‑1 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct > 2:647466/1‑140 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct < 2:145802/140‑1 (MQ=255)
cAGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtct < 2:552744/140‑1 (MQ=255)
aGCTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGtctc < 2:1021198/140‑1 (MQ=255)
cTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGTCTCAg > 2:882631/1‑140 (MQ=255)
cTGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGTCTCAg < 2:980882/140‑1 (MQ=255)
tGCGCCGGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGTCTCAgg < 2:1284053/140‑1 (MQ=255)
|
CGAGCGTCGAGGCTTCAACAGGCCCGGCGATCACCCGAATACCGCAGGCATCGGCGCATAGCTGGTTGAGCAGCGTGTTCTGGCAGCCTCCGCCGACAATATGCAGTTGCGAGAAATCTTCACCGCGCAGCTGCGCCAGCTCATGCAACACATCGGCATACAGCAGCGCCAGACTGTCGAAAATGCAGCGCGCCAGTTCAGCATCACTTTCCGGGATCGGTTGCGCCGTTTCCCGACACGCAGCCTGAATTTCGCTGCACATCGTCTCAGG > NC_000913/4096155‑4096425
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
