Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
161 |
75.5 |
2581324 |
99.3% |
2563254 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,312,224 |
T→C |
L256L (TTA→TTG) |
alsR ← |
DNA‑binding transcriptional repressor AlsR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,312,224 | 0 | T | C | 100.0%
| 265.2
/ NA
| 72 | L256L (TTA→TTG) | alsR | DNA‑binding transcriptional repressor AlsR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/36); total (36/36) |
TACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACAAATAATCTTTGCCCCGTTCT > NC_000913/4312091‑4312354
|
tACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATAtt < 1:681100/140‑1 (MQ=255)
cTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAg < 2:1201016/140‑1 (MQ=255)
cTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAg < 1:556998/140‑1 (MQ=255)
aTTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCa > 2:786208/1‑140 (MQ=255)
tttCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCAt > 2:283210/1‑140 (MQ=255)
cAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTAc < 1:788217/140‑1 (MQ=255)
aGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACg > 2:628841/1‑140 (MQ=255)
cgcgcTTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGGCAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGAc > 2:995740/1‑140 (MQ=255)
cgcgcCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGAc > 2:388897/1‑140 (MQ=255)
cgcgcCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGAc > 2:47033/1‑140 (MQ=255)
cgcgcCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGAc > 2:79242/1‑140 (MQ=255)
gagaAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACgg < 2:432158/140‑1 (MQ=255)
agaagaAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGc < 2:224046/140‑1 (MQ=255)
aagaaATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGt > 2:1025806/1‑140 (MQ=255)
aTCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCg > 1:79828/1‑140 (MQ=255)
aTCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCg > 2:374664/1‑140 (MQ=255)
aacaaTTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCgggg < 2:1062254/140‑1 (MQ=255)
aaTTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTg < 1:674937/140‑1 (MQ=255)
ttGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGt > 1:113824/1‑140 (MQ=255)
tGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTg < 2:79828/140‑1 (MQ=255)
tGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTg < 2:308689/140‑1 (MQ=255)
gcgcCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGa < 2:870376/140‑1 (MQ=255)
cgcCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAg > 2:961696/1‑140 (MQ=255)
gcCGGTTTTTTGCATATTAATATTAGCTTGTTTAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGc > 1:191614/1‑140 (MQ=255)
gcCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGc < 1:140106/140‑1 (MQ=255)
ccGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCa < 1:675102/140‑1 (MQ=255)
ccGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCa < 1:374664/140‑1 (MQ=255)
ccGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCa < 1:1025806/140‑1 (MQ=255)
ccGGTTTTTTGCATATTAATATTAGCTTGTTCAATGATGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAATGGCGTTTCCGGGGCTGGTGAGCa > 1:764687/1‑140 (MQ=255)
ccGGTTTTTTGCATATTAATATTAGCTTGTTCAATGATGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAATGGCGTTTCCGGGGCTGGTGAGCa < 2:764687/140‑1 (MQ=255)
tattaatattaGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCg > 1:980495/1‑140 (MQ=255)
attaatattaGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCgg < 1:913437/140‑1 (MQ=255)
gCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGc > 1:634001/1‑140 (MQ=255)
cTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCt > 1:1108891/1‑140 (MQ=255)
ttGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTa < 1:388897/140‑1 (MQ=255)
gTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATc > 1:1161555/1‑140 (MQ=255)
ttCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCg > 1:1282710/1‑140 (MQ=255)
ttCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCg > 2:268939/1‑140 (MQ=255)
tCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCgg < 1:961696/140‑1 (MQ=255)
tCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCgg < 1:37665/140‑1 (MQ=255)
cAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGt < 2:195857/140‑1 (MQ=255)
aaTGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTg < 1:995740/140‑1 (MQ=255)
aTGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGa > 1:461867/1‑140 (MQ=255)
tGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGaa > 2:1090726/1‑140 (MQ=255)
ttGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATg < 1:256852/140‑1 (MQ=255)
ttGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATg < 1:268939/140‑1 (MQ=255)
tGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATgg < 1:79242/140‑1 (MQ=255)
tGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATgg < 1:786208/140‑1 (MQ=255)
tGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATgg < 1:47033/140‑1 (MQ=255)
aGCTGGGCGACAGAGACAAAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGt > 1:804294/1‑140 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATg > 2:639549/1‑137 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATg < 1:639549/137‑1 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTa > 1:1053044/1‑140 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTa > 1:174055/1‑140 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTa > 2:404861/1‑140 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTa > 2:284187/1‑140 (MQ=255)
aGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTa > 2:124536/1‑140 (MQ=255)
tGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCt < 2:174055/140‑1 (MQ=255)
ggCGACAGAGAC‑ATAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTAt < 2:206167/140‑1 (MQ=255)
ggCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGt < 1:713789/127‑1 (MQ=255)
ggCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGt > 2:713789/1‑127 (MQ=255)
ggCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTAt > 2:792431/1‑140 (MQ=255)
cAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGtt < 2:980495/140‑1 (MQ=255)
cAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGtt > 2:1067031/1‑140 (MQ=255)
agagAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTta < 1:283210/140‑1 (MQ=255)
agagAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTta < 1:1090726/140‑1 (MQ=255)
gagaCAAAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTta < 2:804294/140‑1 (MQ=255)
aC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACa > 1:391483/1‑140 (MQ=255)
aaaaaaGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACAaat < 1:284187/140‑1 (MQ=255)
aGCGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACAAATAATCt > 1:64556/1‑140 (MQ=255)
cGTCCAGCAAAGTTAGTTGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACAAATAATCttt > 1:690957/1‑140 (MQ=255)
agttagttGCAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACAAATAATCTTTGCCCCGTTCt > 2:916357/1‑140 (MQ=255)
|
TACCTTTTTCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCGACAGAGAC‑AAAAAAAGCGTCCAGCAAAGTTAGTTGTAATATTCTTGCCGAGGCATTACGACCTAATAACGGCGTTTCCGGGGCTGGTGAGCAAATAATATAATCGGCCAGTTTCGCTATCGGTGAATGGTAGCTATGGGTTATACAAATAATCTTTGCCCCGTTCT > NC_000913/4312091‑4312354
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
