Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
151 |
87.4 |
2971636 |
99.2% |
2947862 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,971,832 |
G→A |
R79H (CGC→CAC) |
tas → |
putative NADP(H)‑dependent aldo‑keto reductase Tas |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,971,832 | 0 | G | A | 98.8%
| 278.4
/ ‑5.0
| 81 | R79H (CGC→CAC) | tas | putative NADP(H)‑dependent aldo‑keto reductase Tas |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (38/42); total (38/43) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
GCACAACTCGACTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCGCGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGA > NC_000913/2971696‑2971963
|
gCACAACTCGACTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGa < 1:750947/140‑1 (MQ=255)
caACTCGACTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGaaaa < 1:545961/140‑1 (MQ=255)
aCTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAAtt > 1:93072/1‑140 (MQ=255)
tATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTAt < 1:887699/140‑1 (MQ=255)
tGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCg > 1:700113/1‑140 (MQ=255)
tGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCg < 1:1326476/140‑1 (MQ=255)
ccGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCcacg > 1:998572/1‑123 (MQ=255)
ccGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGcc > 2:900660/1‑140 (MQ=255)
cGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCt > 1:466212/1‑140 (MQ=255)
tCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCg < 1:111210/135‑1 (MQ=255)
tCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCg > 2:111210/1‑135 (MQ=255)
tCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTcc > 2:307751/1‑140 (MQ=255)
gCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTcc > 2:1321557/1‑138 (MQ=255)
gCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTcc < 1:1321557/138‑1 (MQ=255)
tCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAg < 2:93072/140‑1 (MQ=255)
gggCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGCCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGa > 1:1157742/1‑140 (MQ=255)
ggCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAg > 2:178866/1‑140 (MQ=255)
cATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCg > 2:398733/1‑140 (MQ=255)
tAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCaaa < 1:824422/130‑1 (MQ=255)
tAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCaaa > 2:824422/1‑130 (MQ=255)
tATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgc > 1:887524/1‑140 (MQ=255)
tATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgc < 2:51638/140‑1 (MQ=255)
aTCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgcg < 1:342162/140‑1 (MQ=255)
aTCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgcg > 2:889092/1‑140 (MQ=255)
aTCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgcg < 2:1139222/140‑1 (MQ=255)
aTCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgcg > 1:72502/1‑140 (MQ=255)
aTCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTcgcg < 1:889092/140‑1 (MQ=255)
cGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCa < 1:178866/140‑1 (MQ=255)
aCGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaat < 2:466212/140‑1 (MQ=255)
aCGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaat < 1:1071651/140‑1 (MQ=255)
aCGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaat < 2:1157742/140‑1 (MQ=255)
aCGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaat < 1:99532/140‑1 (MQ=255)
gTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaataa > 1:1033069/1‑140 (MQ=255)
gTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaataa > 1:146717/1‑140 (MQ=255)
ttGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCaataat > 1:1121244/1‑140 (MQ=255)
gCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGt > 2:1146169/1‑127 (MQ=255)
gCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGt < 1:1146169/127‑1 (MQ=255)
ccGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGAc > 2:46999/1‑140 (MQ=255)
cccAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATcc > 1:169943/1‑140 (MQ=255)
aGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGcc > 1:1010219/1‑140 (MQ=255)
gTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGccc < 2:89172/140‑1 (MQ=255)
gTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGccc < 2:700113/140‑1 (MQ=255)
tACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCg > 2:1203672/1‑140 (MQ=255)
tACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTAACTCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCg > 2:672723/1‑140 (MQ=255)
aCCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCgg > 2:862954/1‑140 (MQ=255)
cTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGAt > 2:1074359/1‑140 (MQ=255)
cTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGAt < 1:559457/140‑1 (MQ=255)
tCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATc < 1:900660/140‑1 (MQ=255)
ccGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCa > 2:1284305/1‑140 (MQ=255)
cgcgCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAg > 1:1193096/1‑140 (MQ=255)
cgcgCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAg > 2:726814/1‑140 (MQ=255)
cgcgCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAg > 2:651579/1‑140 (MQ=255)
cgcCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGgc > 1:701097/1‑140 (MQ=255)
cgcCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGgc < 1:99003/140‑1 (MQ=255)
ccccGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATc < 2:1182935/134‑1 (MQ=255)
ccccGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATc > 1:1182935/1‑134 (MQ=255)
ccccGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGgcgc < 1:862954/140‑1 (MQ=255)
ccccGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGgcgc < 2:169943/140‑1 (MQ=255)
ccccGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGgcgc > 2:428032/1‑140 (MQ=255)
cccGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCt < 2:1033069/140‑1 (MQ=255)
gCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGga < 1:651579/140‑1 (MQ=255)
aaGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGgaag > 1:821475/1‑140 (MQ=255)
aaGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGgaag < 1:428032/140‑1 (MQ=255)
aaCCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATcc > 1:1344641/1‑140 (MQ=255)
aaCCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCGCGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAg < 1:1329016/140‑1 (MQ=255)
aaCCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAg < 1:1203672/140‑1 (MQ=255)
aCCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAgc > 1:874486/1‑140 (MQ=255)
ccTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAgcg < 1:286791/140‑1 (MQ=255)
gCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGAc > 2:526748/1‑140 (MQ=255)
gCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGAc < 2:701097/140‑1 (MQ=255)
gCAACTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGAc > 2:815660/1‑140 (MQ=255)
aaCTGGCTGGCGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAg > 1:1362814/1‑140 (MQ=255)
tggctggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCt < 2:1121244/140‑1 (MQ=255)
gctggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCa < 2:821475/140‑1 (MQ=255)
tggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAg < 2:1010219/140‑1 (MQ=255)
tggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAg < 1:398733/140‑1 (MQ=255)
tggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAg < 2:1344641/140‑1 (MQ=255)
tggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAg < 1:1284305/140‑1 (MQ=255)
tggcGAAACATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAg < 1:672723/140‑1 (MQ=255)
aaCATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTa < 2:72502/140‑1 (MQ=255)
aCATGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTAc < 2:1362814/140‑1 (MQ=255)
tGGCAGCCACGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGa < 1:526748/140‑1 (MQ=255)
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GCACAACTCGACTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCGCGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGA > NC_000913/2971696‑2971963
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
