Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F28 I1 R1 151 87.4 2971636 99.2% 2947862 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,162,515 A→G V52A (GTA→GCA)  ftsP ← cell division protein required during stress conditions

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,162,5150AG100.0% 254.5 / NA 71V52A (GTA→GCA) ftsPcell division protein required during stress conditions
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (46/25);  total (46/25)

TTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTACAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACTG  >  NC_000913/3162379‑3162651
                                                                                                                                        |                                                                                                                                        
ttCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAg                                                                                                                                       >  2:680748/1‑140 (MQ=255)
     tCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATa                                                                                                                                  >  2:159853/1‑140 (MQ=255)
         gCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACa                                                                                                                              >  1:81201/1‑140 (MQ=255)
          cGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAg                                                                                                                             <  2:142449/140‑1 (MQ=255)
                  gTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGcc                                                                                                                     <  1:1464536/140‑1 (MQ=255)
                        aaGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGc                                                                                                               <  2:152104/140‑1 (MQ=255)
                           cTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCgag                                                                                                            >  1:1295849/1‑140 (MQ=255)
                                cATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCa                                                                                                       >  1:896562/1‑140 (MQ=255)
                                     tcgCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCACACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAg                                                                                                  >  2:531701/1‑140 (MQ=255)
                                     tcgCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGT‑AATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAgc                                                                                                 >  1:1281375/1‑140 (MQ=255)
                                        cccTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAgcgg                                                                                               >  1:1257394/1‑140 (MQ=255)
                                        cccTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAgcgg                                                                                               >  1:1452663/1‑140 (MQ=255)
                                        cccTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAgcgg                                                                                               <  2:1295849/140‑1 (MQ=255)
                                         ccTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAgcggc                                                                                              >  1:245948/1‑140 (MQ=255)
                                            tCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCACACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGa                                                                                           <  1:531701/140‑1 (MQ=255)
                                                   gcgGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTa                                                                                    >  2:682767/1‑140 (MQ=255)
                                                      gATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCg                                                                                 >  1:784047/1‑140 (MQ=255)
                                                      gATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCg                                                                                 >  1:796404/1‑140 (MQ=255)
                                                       aTAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCgg                                                                                <  1:682767/140‑1 (MQ=255)
                                                           tCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGc                                                                            >  2:1074872/1‑140 (MQ=255)
                                                             ggCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTg                                                                          >  2:1144905/1‑140 (MQ=255)
                                                                cccAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTg                                                                       <  2:220864/140‑1 (MQ=255)
                                                                    ggTAACGACCATTGATTCCCCAGACCAACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCg                                                                   >  2:1077730/1‑140 (MQ=255)
                                                                         cGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTgc                                                              >  1:512831/1‑140 (MQ=255)
                                                                         cGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTgc                                                              >  2:506298/1‑140 (MQ=255)
                                                                          gACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCgg                                                                  <  2:896262/135‑1 (MQ=255)
                                                                          gACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCgg                                                                  >  1:896262/1‑135 (MQ=255)
                                                                             cATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTg                                                          <  2:1257394/140‑1 (MQ=255)
                                                                               ttGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGc                                                        >  2:67665/1‑140 (MQ=255)
                                                                               ttGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGc                                                        >  1:366089/1‑140 (MQ=255)
                                                                               ttGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGc                                                        >  1:188160/1‑140 (MQ=255)
                                                                               ttGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGc                                                        >  2:574528/1‑140 (MQ=255)
                                                                               ttGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGCGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGc                                                        >  2:679770/1‑140 (MQ=255)
                                                                                tGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGcc                                                       <  1:67665/140‑1 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTg                                                          >  1:377063/1‑131 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTg                                                          <  2:377063/131‑1 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCa                                                   >  1:1134108/1‑138 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCa                                                   <  2:1134108/138‑1 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAgg                                                 >  1:659266/1‑140 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAgg                                                 >  1:1476780/1‑140 (MQ=255)
                                                                                      cccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAgg                                                 >  1:1164683/1‑140 (MQ=255)
                                                                                       ccAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAggg                                                >  1:1407311/1‑140 (MQ=255)
                                                                                           aCCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAAc                                            >  1:1474828/1‑140 (MQ=255)
                                                                                           aCCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAAc                                            <  2:1474828/140‑1 (MQ=255)
                                                                                             cGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAg                                          >  2:686088/1‑140 (MQ=255)
                                                                                             cGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAg                                          <  1:159853/140‑1 (MQ=255)
                                                                                              gACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgc                                         >  2:1060318/1‑140 (MQ=255)
                                                                                              gACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTG‑CCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCtt                                                     >  2:521292/1‑127 (MQ=255)
                                                                                              gACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTG‑CCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCtt                                                     <  1:521292/127‑1 (MQ=255)
                                                                                               aCGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgcg                                        >  2:1429591/1‑140 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgcgc                                       >  2:74174/1‑140 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgcgc                                       <  1:1212824/140‑1 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgcgc                                       >  1:1252584/1‑140 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgcgc                                       >  2:1038879/1‑140 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAgcgc                                       >  2:1212824/1‑140 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAg                                          >  2:535983/1‑137 (MQ=255)
                                                                                                cgcgcgTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAg                                          <  1:535983/137‑1 (MQ=255)
                                                                                                     gtgtCCCTGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGca                                  <  2:1164683/140‑1 (MQ=255)
                                                                                                            tGGCGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTg                           <  2:366089/140‑1 (MQ=255)
                                                                                                               cGTAAATGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCaa                        <  1:1077730/140‑1 (MQ=255)
                                                                                                                   aaTGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATccc                    >  1:1204538/1‑140 (MQ=255)
                                                                                                                    aTGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATcccc                   <  2:1084676/140‑1 (MQ=255)
                                                                                                                     tGACCAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCg                  <  1:1074872/140‑1 (MQ=255)
                                                                                                                         cAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGc              <  2:512831/140‑1 (MQ=255)
                                                                                                                         cAGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGc              <  1:74174/140‑1 (MQ=255)
                                                                                                                          aGTGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGcc             <  1:1144905/140‑1 (MQ=255)
                                                                                                                            tGCGCACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGCCtg           >  1:1262276/1‑140 (MQ=255)
                                                                                                                              cgcACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGCCtgaa         >  1:50043/1‑140 (MQ=255)
                                                                                                                                cACGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGCCtgaatg       >  2:1026803/1‑140 (MQ=255)
                                                                                                                                 aCGTTGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGGCTGCACAAAGTGCAATCCCCGCTGCCtggatga      >  2:847386/1‑140 (MQ=255)
                                                                                                                                    ttGTGCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACt   >  2:907701/1‑140 (MQ=255)
                                                                                                                                     tgtgCAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAATAGCGCCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACTg  >  2:1390265/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                        
TTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACCATTGATTCCCCAGACCGACGCGCGTGTCCCTGGCGTAAATGACCAGTGCGCACGTTGTACAGTCATAAACAGCGGTTGCCCACGGCGAGATTCAAGTAGCGGCGGAACGGGTAGCGGTTGCTGTTGCCCGGCTGCGCTGGCCTTCAGGGGAACAGCGCCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACTG  >  NC_000913/3162379‑3162651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A