Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 183 98.6 3427438 96.9% 3321187 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,638,691 T→C Q198R (CAG→CGG)  yfgM ← ancillary SecYEG translocon subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,638,6910TC100.0% 258.0 / NA 69Q198R (CAG→CGG) yfgMancillary SecYEG translocon subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/33);  total (36/33)

GGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAGCCCACCCTT  >  NC_000913/2638554‑2638823
                                                                                                                                         |                                                                                                                                    
ggACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGc                                                                                                                                    >  1:880881/1‑140 (MQ=255)
    aTCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGcatca                                                                                                                                >  1:918041/1‑140 (MQ=255)
           ccACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCt                                                                                                                         <  1:1374652/140‑1 (MQ=255)
           ccACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCt                                                                                                                         <  1:1461817/140‑1 (MQ=255)
           ccACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCt                                                                                                                         <  2:413793/140‑1 (MQ=255)
            cacaTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTc                                                                                                                        <  1:1398988/140‑1 (MQ=255)
              caTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAg                                                                                                                      >  1:403995/1‑140 (MQ=255)
              caTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAg                                                                                                                      >  2:1605552/1‑140 (MQ=255)
                tcttctTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTg                                                                                                                    >  1:526019/1‑140 (MQ=255)
                tcttctTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTg                                                                                                                    >  2:736997/1‑140 (MQ=255)
                 cttcttCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGca                                                                                                                                   <  2:51079/124‑1 (MQ=255)
                 cttcttCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGca                                                                                                                                   >  1:51079/1‑124 (MQ=255)
                 cttcttCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCt                                                                                                                         <  1:152041/134‑1 (MQ=255)
                 cttcttCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCt                                                                                                                         >  2:152041/1‑134 (MQ=255)
                 cttcttCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGc                                                                                                                   >  2:1574555/1‑140 (MQ=255)
                   tcttcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCt                                                                                                                         >  1:30662/1‑132 (MQ=255)
                   tcttcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCg                                                                                                                 <  1:1667415/140‑1 (MQ=255)
                   tcttcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCACCCGCATCATTTCGCt                                                                                                                         <  2:30662/132‑1 (MQ=255)
                     ttcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGa                                                                                                               >  2:1080887/1‑140 (MQ=255)
                      tcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAg                                                                                                              <  2:1271263/140‑1 (MQ=255)
                              aaaCAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCg                                                                                                      <  1:420998/140‑1 (MQ=255)
                               aaCAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGc                                                                                                     >  1:159597/1‑140 (MQ=255)
                                    cGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTc                                                                                                >  1:213562/1‑140 (MQ=255)
                                     gAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCa                                                                                               <  2:403995/140‑1 (MQ=255)
                                      aaCAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCAc                                                                                              >  2:442272/1‑140 (MQ=255)
                                      aaCAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCAc                                                                                              >  2:447638/1‑140 (MQ=255)
                                         aGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGcc                                                                                           <  2:890962/140‑1 (MQ=255)
                                            cGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGc                                                                                        <  2:319322/140‑1 (MQ=255)
                                            cGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGc                                                                                        <  2:844377/140‑1 (MQ=255)
                                                      ggTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCa                                                                              <  1:48194/140‑1 (MQ=255)
                                                         aaCGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTa                                                                           >  2:223302/1‑140 (MQ=255)
                                                         aaCGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTa                                                                           >  1:1082310/1‑140 (MQ=255)
                                                           cGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTAcg                                                                         <  1:1605552/140‑1 (MQ=255)
                                                               aaGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCa                                                                     <  1:736997/140‑1 (MQ=255)
                                                                  cAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCt                                                                  >  2:1689896/1‑140 (MQ=255)
                                                                  cAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCt                                                                  <  1:398245/140‑1 (MQ=255)
                                                                        tGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTa                                                            >  1:348192/1‑140 (MQ=255)
                                                                          gcagcaGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATc                                                          >  1:576191/1‑140 (MQ=255)
                                                                            agcagTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCAc                                                        <  1:1689896/140‑1 (MQ=255)
                                                                              cagTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCt                                                      <  2:576191/140‑1 (MQ=255)
                                                                               agTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCtt                                                     >  2:272003/1‑140 (MQ=255)
                                                                                 tAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTg                                                   >  1:1362835/1‑140 (MQ=255)
                                                                                  aaTTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGc                                                  <  1:447638/140‑1 (MQ=255)
                                                                                   aTTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCt                                                 <  2:213562/140‑1 (MQ=255)
                                                                                      tACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAg                                              >  1:481185/1‑140 (MQ=255)
                                                                                      tACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAg                                              >  1:851520/1‑140 (MQ=255)
                                                                                      tACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAg                                              <  2:1082310/140‑1 (MQ=255)
                                                                                         gCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCaa                                           >  2:270188/1‑140 (MQ=255)
                                                                                           aaTTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATg                                         >  2:1654152/1‑140 (MQ=255)
                                                                                             ttGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCAc                                                        >  2:1596009/1‑123 (MQ=255)
                                                                                             ttGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCAc                                                        <  1:1596009/123‑1 (MQ=255)
                                                                                              tGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCtt                                      <  2:102974/140‑1 (MQ=255)
                                                                                              tGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCACACCTTGCTTATCACCTTTGCTCAGCAATGCtt                                      <  1:442272/140‑1 (MQ=255)
                                                                                                     ggTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACg                               >  2:134099/1‑140 (MQ=255)
                                                                                                      gTCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGc                              <  1:270188/140‑1 (MQ=255)
                                                                                                       tCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCa                             >  2:1093595/1‑140 (MQ=255)
                                                                                                       tCCCTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCa                             >  1:1566223/1‑140 (MQ=255)
                                                                                                        cccTCTCAGATGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAg                            <  1:1591339/140‑1 (MQ=255)
                                                                                                                 aTGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGcaac                   <  2:526019/140‑1 (MQ=255)
                                                                                                                 aTGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGcaac                   >  2:972930/1‑140 (MQ=255)
                                                                                                                 aTGGACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGcaac                   >  1:1113906/1‑140 (MQ=255)
                                                                                                                    gACAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAAt                >  2:1464215/1‑140 (MQ=255)
                                                                                                                     aCAAATTATTAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATg               >  1:198872/1‑140 (MQ=255)
                                                                                                                      cAAATTATTAATTTTCATACGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATgg              >  2:703257/1‑140 (MQ=255)
                                                                                                                         attattAATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAg           >  2:719463/1‑140 (MQ=255)
                                                                                                                           tattaATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAGcc         <  1:223302/140‑1 (MQ=255)
                                                                                                                           tattaATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAGcc         <  2:880881/140‑1 (MQ=255)
                                                                                                                             ttaATTTTCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAGCCCa       <  2:348192/140‑1 (MQ=255)
                                                                                                                                  tttCATCCGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAGCCCACCCtt  <  2:1362835/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                    
GGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTTCACGCCTGCTTCCCATGCACTACGCGCACCTTGCTTATCACCTTTGCTCAGCAATGCTTCACCACGCAGGTCGGCAACAATGGCAGCCCACCCTT  >  NC_000913/2638554‑2638823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A